BAC Information

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BAC

Clone NameB6Ng01-262C13
Chromosome11 (Build37)
Map Location 26,500,554 - 26,501,692
singlet/doubletsinglet
Overlap genenone
Upstream gene5730522E02Rik, LOC100042328, LOC100042345, Fancl, Vrk2, EG628586
Downstream genePpia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367, LOC100042377
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262C13.bB6Ng01-262C13.g
ACCGA066650GA066651
length1,2301,139
definitionB6Ng01-262C13.b B6Ng01-262C13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttaagttctgtaccccatttttcagatatttgattttctt
gagtccttcttgagttctttagatattttggatattagtcccctatctga
tttaggattggtaaagatcctttcccaatctgttggtggcctttttgtct
tattgacagcgtcttttgccttacagagctttgtaatattatgaggtccc
atttgtggattctcgatctgtcagcacaagccattgctgttctgttcagg
aatctttccctagtggccatgtcttcgaggcttttcctcacttttttcct
atataagttttagtgtctgtggttttatgtggaggtccttgatccactta
gacttgagctttgtacaaggagaaaagaatggatcaatttgcatacttct
aaatgataactgccagttgtgccagcacgatttgttgaacaggcaatctt
tttttccaccgaattgttttagctccctttttaaagatcaagtgaccata
ggtgtgtgggttcatttctgggtctttaattcaattccattaatatacct
ttctgtcattgtaccagtaacatgtggttcttatcacaattgctctgtag
tacagctttaggtcaggcatggtgattccaccagaggttcttttatcatt
gagaagagtttttgccatcctaggttttttgttactctagatgaatttgc
aaattgtgctttctaactctttgaagaattgagttggagttttgatgggg
attgcattgaatctgtagattgctttcagcaagatagccatttttactat
attaatcctgccagtccatgagcatggaagatctttccatctctgagatc
ttctttaatttctttcttcagagacttgaagttcttatcatacagatctt
tcacttccttagttaaagtcacaccaaggtatttaatattatttgtgact
attgtgaagggtgttgttccctaatttctttctcagcctgtttatccttt
gtgtagagaaaggccactgattttttgagttaattttatatccagctact
tcactgaagctgtttatcaggtgaatttagtgtcacttacctatactatt
cctattcatctggcaaaaggaatatttgactcctccttcattggattcct
ggatctcctttgggtgccaatggctagccagatctcagcacctatatggg
aaatagtaggagaaaaggtggaaagctcct
gaattctagcaattggagaggctgaggcaggagcatgaagaactcaggcc
agcctgggttacctcatgaaaacaagagaaaagtctggggctgttgctta
gtgactgagctcttcctagcatgcagcacaaaccctgagttcagtctcaa
ataacacacacacacacacacacacacacacacacacacacacacacacc
tcgaaaagggatagagaagcaagaaaacgataagttttctgtccagatgg
gtgagtctaggtcaggcagaggaatatagaggaacatgactgattttgtg
gagaggaagtgccctgaggtttgcatgtctttctcttctggcagcaaggt
gcagttagcatgcatgctgtttctagttctccctggctaccggacagttc
ttagattctgattctattctgagaggcttcaaattgagggtgtgatcttg
tgaggattatgcagttacgtaataggtgtttgaaatgcatttacttttat
atgaatgggacaagacttgcttttcacatcttggtttttgtcaagtaaaa
gcatgttgacatcctccagttgccatcaacacttaaatatttaccacatt
ttaactgtaatgttttctactcttcaaaaacatggatggatgctaattca
actatttccttttggatgactatttagttattttcaacttcattaaattt
tttgaaagtagggttttttcagcttcaccagcactgacagtaatggttga
atattctgtaggcactagaaaattaaaccaggaaaacacaaacagaaact
gtatcatcctatgccccattttttgatgtatttttttctttattcttacc
tgcatatgatctaagagaaagtaagtaaaaaaagaaatcaaaggatgttg
gacttggaggctggtatgccatctgaaccaagatggaaaaataattgaat
aaattaatagaggcctttaggactcctgggtgcagcaaattatgggaaag
caactgggaagtgtataatagttacaagttattcagtgtgcttgttataa
agtcatcttttttctgtaagatttatttagtttatgtgtagtcatgcctt
gctgcatagttgcaatgtgcactgtgtacatgccagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26500554_26501692
seq2: B6Ng01-262C13.g_66_1204

seq1  GAATTCTAGCAATTGGAGAGGCTGAGGCAGGAGCATGAAGAACTCAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGCAATTGGAGAGGCTGAGGCAGGAGCATGAAGAACTCAGGCC  50

seq1  AGCCTGGGTTACCTCATGAAAACAAGAGAAAAGTCTGGGGCTGTTGCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGGTTACCTCATGAAAACAAGAGAAAAGTCTGGGGCTGTTGCTTA  100

seq1  GTGACTGAGCTCTTCCTAGCATGCAGCACAAACCCTGAGTTCAGTCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGAGCTCTTCCTAGCATGCAGCACAAACCCTGAGTTCAGTCTCAA  150

seq1  ATAACACACACACACACACACACACACACACACACACACACACACACACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACACACACACACACACACACACACACACACACACACACACACACC  200

seq1  TCGAAAAGGGATAGAGAAGCAAGAAAACGATAAGTTTTCTGTCCAGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAAAGGGATAGAGAAGCAAGAAAACGATAAGTTTTCTGTCCAGATGG  250

seq1  GTGAGTCTAGGTCAGGCAGAGGAATATAGAGGAACATGACTGATTTTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCTAGGTCAGGCAGAGGAATATAGAGGAACATGACTGATTTTGTG  300

seq1  GAGAGGAAGTGCCCTGAGGTTTGCATGTCTTTCTCTTCTGGCAGCAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGAAGTGCCCTGAGGTTTGCATGTCTTTCTCTTCTGGCAGCAAGGT  350

seq1  GCAGTTAGCATGCATGCTGTTTCTAGTTCTCCCTGGCTACCGGACAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAGCATGCATGCTGTTTCTAGTTCTCCCTGGCTACCGGACAGTTC  400

seq1  TTAGATTCTGATTCTATTCTGAGAGGCTTCAAATTGAGGGTGTGATCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTCTGATTCTATTCTGAGAGGCTTCAAATTGAGGGTGTGATCTTG  450

seq1  TGAGGATTATGCAGTTACGTAATAGGTGTTTGAAATGCATTTACTTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGATTATGCAGTTACGTAATAGGTGTTTGAAATGCATTTACTTTTAT  500

seq1  ATGAATGGGACAAGACTTGCTTTTCACATCTTGGTTTTTGTCAAGTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGGGACAAGACTTGCTTTTCACATCTTGGTTTTTGTCAAGTAAAA  550

seq1  GCATGTTGACATCCTCCAGTTGCCATCAACACTTAAATATTTACCACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTGACATCCTCCAGTTGCCATCAACACTTAAATATTTACCACATT  600

seq1  TTAACTGTAATGTTTTCTACTCTTCAAAAACATGGATGGATGCTAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGTAATGTTTTCTACTCTTCAAAAACATGGATGGATGCTAATTCA  650

seq1  ACTATTTCCTTTTGGATGACTATTTAGTTATTTTCAACTTCATTAAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTCCTTTTGGATGACTATTTAGTTATTTTCAACTTCATTAAATTT  700

seq1  TTTGAAAGTAGGGTTTTTTCAGCTTCACCAGCACTGACAGTAATGGTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAGTAGGGTTTTTTCAGCTTCACCAGCACTGACAGTAATGGTTGA  750

seq1  ATATTCTGTAGGCACTAGAAAATTAAACCAGGAAAACACAAACAGAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTGTAGGCACTAGAAAATTAAACCAGGAAAACACAAACAGAAACT  800

seq1  GTATCATCCTATGCCCCATTTTTTGATGTATTTTTTTCTTTATTCTTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATCCTATGCCCCATTTTTTGATGTATTTTTTTCTTTATTCTTACC  850

seq1  TGCATATGATCTAAGAGAAAGTAAGTAAAAAAAGAAATCAAAGGATGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATGATCTAAGAGAAAGTAAGTAAAAAAAGAAATCAAAGGATGTTG  900

seq1  GACTTGGAGGCTGGTATGCCATCTGAACCAAGATGGAAAAATAATTGAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGAGGCTGGTATGCCATCTGAACCAAGATGGAAAAATAATTGAAT  950

seq1  AAATTAATAGAGGCC-TTAAGACTCCTGGGTGCAGCAAATTATGGGAAAG  999
      ||||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  AAATTAATAGAGGCCTTTAGGACTCCTGGGTGCAGCAAATTATGGGAAAG  1000

seq1  CAACTGGGAAGTGTATAATAGTTACAAGTTATTCAGTGTGGCTTGTTATA  1049
      ||||||||||||||||||||||||||||||||||||||| ||||||||| 
seq2  CAACTGGGAAGTGTATAATAGTTACAAGTTATTCAGTGT-GCTTGTTAT-  1048

seq1  AAAGTCATCTTTTCT-TGTTAGATTTATTTAGTTTATGTGTAGTCATGCT  1098
      ||||||||||||| | ||| ||||||||||||||||||||||||||||| 
seq2  AAAGTCATCTTTTTTCTGTAAGATTTATTTAGTTTATGTGTAGTCATGCC  1098

seq1  TTGCCTGCATATGTGC-ATGTGCACTGTGTACATGCCAGTTG  1139
      ||| |||||||  ||| |||||||||||||||||||||||||
seq2  TTG-CTGCATAGTTGCAATGTGCACTGTGTACATGCCAGTTG  1139