BAC Information

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BAC

Clone NameB6Ng01-262P22
Chromosome11 (Build37)
Map Location 63,932,368 - 64,149,446
singlet/doubletdoublet
Overlap geneEG544785
Upstream genePmp22, LOC433423, LOC100042799, LOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik
Downstream geneHs3st3a1, LOC626959, Elac2, AU040829, 1700086D15Rik, LOC100041790, Myocd
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262P22.bB6Ng01-262P22.g
ACCGA067272GA067273
length1461,185
definitionB6Ng01-262P22.b B6Ng01-262P22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,149,301 - 64,149,446)(63,932,368 - 63,933,549)
sequence
aactttccctcctcttaagacttgctggcctgtggacagaacacaatgca
ctcaaatggaccgcgccagcaggtcaatctagacccatattcctgagcag
aataaatgatgaggggaaaaaaggccatggagggtgggaggtgggg

gaattcaactcccataagtccaaacacacctctgctttctgacttaacag
attttcaagttccagatgtagaagccctgctctgcttctctaaggagcca
tggcttctgttgcaagggtaacccttaaaaagagatgtatgtacttttag
gtatcttcagagtacagagttaggacagccatgcacacactcatatgtat
gcagggacacacacacacacatatacatatccgtgcgtgcacattcatac
attacaggcttatattgacatttcaaattcagatgatcattactgtttta
attcctatctttgactgtacagagggatctcttttctctgtgtgtctatg
tctcagggttgtgtgtgccaatggaggcatatggatgtatgttgattatg
cttaacaattcacagaatgatcaccacacaagtggggagttttgggtaga
cagcaaaggcaatggttccatggagagaagccctcagtggtattggaaaa
tgtttggggtacatgtggaagatcgtctcaccacaaattagttgagacta
gaggaggctttctctgtgacagggcgggggccaggctaaggcagggcctc
tttttggaactcatacgcctgccatggagttccttgggagggacatggcg
ccactttggttagtgggtcatagctctgacctccaaagacaaagatgttt
ttaaagaatattatgatatacatgcctgtaagaaaatcttcctccacatt
tttctcataaatgtggaacgcttttgattatgaaactgggggaaaagctt
ctaaaataaaatttctgggttaatatgtatatgaaattataagggtatgc
atataagccaatatattattgctaagtcatatgacccagagagctgtatc
aatttaatacctctgggtgtgcaagggagctggcttcttccctctttgat
atttttttcctgctgagacattgctttccttgtgccatcattttatattt
ggaacttttcctatgtgctactgtaatgcattgtcgtccccccccactgg
gtatatggaaacattattctttttcaccaatttatcttttgtgtcatgac
actatcctaaatttgaattgaatatcctgcttcacaggtcaaaacttttc
gtttcttgtaatcctttctcggaaaacgccagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_64149301_64149446
seq2: B6Ng01-262P22.b_50_195 (reverse)

seq1  CCCCACCTCCCACCCTCCATGGCCTTTTTTCCCCTCATCATTTATTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCTCCCACCCTCCATGGCCTTTTTTCCCCTCATCATTTATTCTGC  50

seq1  TCAGGAATATGGGTCTAGATTGACCTGCTGGCGCGGTCCATTTGAGTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAATATGGGTCTAGATTGACCTGCTGGCGCGGTCCATTTGAGTGCA  100

seq1  TTGTGTTCTGTCCACAGGCCAGCAAGTCTTAAGAGGAGGGAAAGTT  146
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCTGTCCACAGGCCAGCAAGTCTTAAGAGGAGGGAAAGTT  146


seq1: chr11_63932368_63933549
seq2: B6Ng01-262P22.g_68_1252

seq1  GAATTCAACTCCCATAAGTCCAAACACACCTCTGCTTTCTGACTTAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTCCCATAAGTCCAAACACACCTCTGCTTTCTGACTTAACAG  50

seq1  ATTTTCAAGTTCCAGATGTAGAAGCCCTGCTCTGCTTCTCTAAGGAGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAGTTCCAGATGTAGAAGCCCTGCTCTGCTTCTCTAAGGAGCCA  100

seq1  TGGCTTCTGTTGCAAGGGTAACCCTTAAAAAGAGATGTATGTACTTTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCTGTTGCAAGGGTAACCCTTAAAAAGAGATGTATGTACTTTTAG  150

seq1  GTATCTTCAGAGTACAGAGTTAGGACAGCCATGCACACACTCATATGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTCAGAGTACAGAGTTAGGACAGCCATGCACACACTCATATGTAT  200

seq1  GCAGGGACACACACACACACATATACATATCCGTGCGTGCACATTCATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGACACACACACACACATATACATATCCGTGCGTGCACATTCATAC  250

seq1  ATTACAGGCTTATATTGACATTTCAAATTCAGATGATCATTACTGTTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGGCTTATATTGACATTTCAAATTCAGATGATCATTACTGTTTTA  300

seq1  ATTCCTATCTTTGACTGTACAGAGGGATCTCTTTTCTCTGTGTGTCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTATCTTTGACTGTACAGAGGGATCTCTTTTCTCTGTGTGTCTATG  350

seq1  TCTCAGGGTTGTGTGTGCCAATGGAGGCATATGGATGTATGTTGATTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGGTTGTGTGTGCCAATGGAGGCATATGGATGTATGTTGATTATG  400

seq1  CTTAACAATTCACAGAATGATCACCACACAAGTGGGGAGTTTTGGGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAATTCACAGAATGATCACCACACAAGTGGGGAGTTTTGGGTAGA  450

seq1  CAGCAAAGGCAATGGTTCCATGGAGAGAAGCCCTCAGTGGTATTGGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAGGCAATGGTTCCATGGAGAGAAGCCCTCAGTGGTATTGGAAAA  500

seq1  TGTTTGGGGTACATGTGGAAGATCGTCTCACCACAAATTAGTTGAGACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGGTACATGTGGAAGATCGTCTCACCACAAATTAGTTGAGACTA  550

seq1  GAGGAGGCTTTCTCTGTGACAGGGCGGGGGCCAGGCTAAGGCAGGGCCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGGCTTTCTCTGTGACAGGGCGGGGGCCAGGCTAAGGCAGGGCCTC  600

seq1  TTTTTGGAACTCATACGCCTGCCATGGAGTTCCTTGGGAGGGACATGGCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAACTCATACGCCTGCCATGGAGTTCCTTGGGAGGGACATGGCG  650

seq1  CCACTTTGGTTAGTGGGTCATAGCTCTGACCTCCAAAGACAAAGATGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTGGTTAGTGGGTCATAGCTCTGACCTCCAAAGACAAAGATGTTT  700

seq1  TTAAAGAATATTATGATATACATGCCTGTAAGAAAATCTTCCTCCACATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAATATTATGATATACATGCCTGTAAGAAAATCTTCCTCCACATT  750

seq1  TTTCTCATAAATGTGGAACGCTTTTGATTATGAAACTGGGGGAAAAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATAAATGTGGAACGCTTTTGATTATGAAACTGGGGGAAAAGCTT  800

seq1  CTAAAATAAAATTTCTGGGTTAATATGTATATGAAATTATAAGGGTATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATAAAATTTCTGGGTTAATATGTATATGAAATTATAAGGGTATGC  850

seq1  ATATAAGCCAATATA-TATTGCTAAGTCATATGACCCAGAGAGCTGTATC  899
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATATAAGCCAATATATTATTGCTAAGTCATATGACCCAGAGAGCTGTATC  900

seq1  AATTT-ATACCCCTGGGTGTGCAAGGGAGCTGGC-TCCTCCCTCTTTGAT  947
      ||||| ||||| |||||||||||||||||||||| || ||||||||||||
seq2  AATTTAATACCTCTGGGTGTGCAAGGGAGCTGGCTTCTTCCCTCTTTGAT  950

seq1  A-TTTTTTCCTGCTGAGACATTGCTTTTCTTGTGCCCATCA-TTTATATT  995
      | ||||||||||||||||||||||||| |||||| |||||| ||||||||
seq2  ATTTTTTTCCTGCTGAGACATTGCTTTCCTTGTG-CCATCATTTTATATT  999

seq1  TGG-ACTTTTCCTATGTGCTACTGTAATGCATTTGTCGTCCCCCCCCACT  1044
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGAACTTTTCCTATGTGCTACTGTAATGCA-TTGTCGTCCCCCCCCACT  1048

seq1  -GGTATATGAAACCATTTTATCTTTTCAACGAATTTATCTTTGTGGTCAT  1093
       |||||||| || |||| | ||||||  || |||||||||||   |||||
seq2  GGGTATATGGAAACATTAT-TCTTTTTCACCAATTTATCTTTTGTGTCAT  1097

seq1  GACA-TATCTAAAATTTGATTTG-ATAT-CTGCCTCACAGGCAAAATACT  1140
      |||| ||||  |||||||| ||| |||| |||| |||||||  ||| |||
seq2  GACACTATCCTAAATTTGAATTGAATATCCTGCTTCACAGGTCAAA-ACT  1146

seq1  TTTCCTTTTCTTGTTAATCTCTTTTCTGGAAAATGGCAGTCT  1182
      ||| | ||||||| ||||| ||||   |||||| | ||||||
seq2  TTT-CGTTTCTTG-TAATC-CTTTCTCGGAAAACGCCAGTCT  1185


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