BAC Information

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BAC

Clone NameB6Ng01-264B11
Chromosome11 (Build37)
Map Location 72,362,355 - 72,505,146
singlet/doubletdoublet
Overlap gene9830002I17Rik, LOC432577, Ube2g1, Ankfy1
Upstream gene9230020A06Rik, Wscd1, Aipl1, 6720460F02Rik, Pitpnm3, 4933427D14Rik, Txnl5, Med31, 4930563E22Rik, Slc13a5, Fbxo39, LOC628100, Tekt1, D130058I21Rik, Ggt6, Mybbp1a
Downstream geneCyb5d2, Zzef1, LOC627119, Atp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1, Trpv3, Aspa, Spata22, Olfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380, Olfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264B11.bB6Ng01-264B11.g
ACCGA068087GA068088
length1,177412
definitionB6Ng01-264B11.b B6Ng01-264B11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,503,973 - 72,505,146)(72,362,355 - 72,362,771)
sequence
gaattccccacaactggaacctgagcacaaacacaattaagttctcaata
caactacggactgagaaactccctcctccacgacctgaaacttggtcatg
catttccccaacacgcagattccttcttaaaggctctacactgctcacga
tctcacatcgtgccttcctgaaccttcctcccaaacctcgctgctgagca
acaggtacacaacattccgtggtgtgcaaaatcatctagttcattttttg
aacagggtttcatgcactccaggtaggctgtgaatgaccctaaattccag
atccttccaagtgctgaatgaaggaactacaagcaggcaggcatacatca
ccacacccagcactttcagtcacttcgctttctcctcctctgttggacaa
tgttcaccacctccaaggtgtttaacagatagaaaaagtaaaaatgaaaa
cagaatccagtcccagccatgaatctggcctcagttcacttaactataaa
gggcaaataacacacctggcaggcctacttcgtgtcactcttaaacctaa
ttcaaatctgagaagactacacaaactgtcacactacccaaatctcagat
caagaaatgatgagtttaatcaacacttaccaaaaaatacaaacaaaaga
caaaaacaaaataggccaggtctagatcaagtaaatcttcagccactcaa
caaagtccaacaagaagtatttttctccaacaatggggtacacaggagaa
gcacaccggccaggtctaatattgtctgatcactactaggtaactcacta
tctcagggctttcaccccaactcatacagtaaagctatggcaagcaaaga
tcctaacattattccttaagggaggctgcacctgagaaaccggatgcctt
tacctgcaatgtcgtaaagtactaaaaaagagacgaaaggactaaagcag
aggtaaaggaacccgaagccctggctttagcacacctctttcaagcagtg
tgacctttggttcaacttcttactgaggaaacatctccttttgccccttt
gtaaacttcagagaatctgagcggtgcccacattgctagggctggccaaa
agctttaaggacctatacagcgccacgcccaaggaagtcgtcgtcagctg
cagtccctggctctttcagaagagtcc
aaaagcaacctgatcttacttaagaccttgtctcaaaaacaaacaaacaa
agaaaagaggctgggtggtttcaccccagtaagtgatctgcagcctctcc
tgaatggtcccaagccagaacagggcacaatgtgtgtgggggcagcggtg
tgagtgggtggatgggactgtgctctgcagcaaaggcgttgggttcagga
tggagctgcaggcaaggttacggagggcagagcagccctctacatcagtt
attagagtgcttatccagcatgcacaaagaccctgggttcaatccctaga
acttcataaagcattgtggtggcaagcctgtaatcccggccctaagaagg
tgaaggcaagcatatcagcagttcatgattattttcatttacatagcgag
tttgaatctaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_72503973_72505146
seq2: B6Ng01-264B11.b_44_1220 (reverse)

seq1  GGACTCTTCCTTGGAAGAGCC-GGGACTGCAGCTGGACGACGGGCTTCTT  49
      |||||||||  || ||||||| |||||||||||| |||||||   | |||
seq2  GGACTCTTC--TGAAAGAGCCAGGGACTGCAGCT-GACGACGACTTCCTT  47

seq1  GGGCGT-GCGCTGTAATAGT-CTTTAAGCTTTTTGGCAGCCCTAGCAAAT  97
      |||||| ||||||||   || ||| |||||||| | |||||||||| |||
seq2  GGGCGTGGCGCTGTATAGGTCCTTAAAGCTTTTGGCCAGCCCTAGC-AAT  96

seq1  GTGGGCA-CGCTCAGATTCTCTGAGGTTTACAAAGGGGCAAAAGGAGATG  146
      ||||||| |||||||||||||||| |||||||||||||||||||||||||
seq2  GTGGGCACCGCTCAGATTCTCTGAAGTTTACAAAGGGGCAAAAGGAGATG  146

seq1  TTTCCTCAGTAAGGAAGTTGA--CCAAGGTCACACTGCTTGAAAGAGGTG  194
      |||||||||||| ||||||||  | |||||||||||||||||||||||||
seq2  TTTCCTCAGTAA-GAAGTTGAACCAAAGGTCACACTGCTTGAAAGAGGTG  195

seq1  TGCTAAAGCCA-GGCTTC-GGTTCCTTTACCTCCTGCTTTAGTCC-TTCG  241
      ||||||||||| |||||| ||||||||||||| |||||||||||| ||||
seq2  TGCTAAAGCCAGGGCTTCGGGTTCCTTTACCT-CTGCTTTAGTCCTTTCG  244

seq1  TCTCTTTTTTAGTACTTTACGACATTGCAGGTAAAGGCATCCGGTTTCTC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTTTTAGTACTTTACGACATTGCAGGTAAAGGCATCCGGTTTCTC  294

seq1  AGGTGCAGCCTCCCTTAAGGAATAATGTTAGGATCTTTGCTTGCCATAGC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGCAGCCTCCCTTAAGGAATAATGTTAGGATCTTTGCTTGCCATAGC  344

seq1  TTTACTGTATGAGTTGGGGTGAAAGCCCTGAGATAGTGAGTTACCTAGTA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGTATGAGTTGGGGTGAAAGCCCTGAGATAGTGAGTTACCTAGTA  394

seq1  GTGATCAGACAATATTAGACCTGGCCGGTGTGCTTCTCCTGTGTACCCCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCAGACAATATTAGACCTGGCCGGTGTGCTTCTCCTGTGTACCCCA  444

seq1  TTGTTGGAGAAAAATACTTCTTGTTGGACTTTGTTGAGTGGCTGAAGATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGAGAAAAATACTTCTTGTTGGACTTTGTTGAGTGGCTGAAGATT  494

seq1  TACTTGATCTAGACCTGGCCTATTTTGTTTTTGTCTTTTGTTTGTATTTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGATCTAGACCTGGCCTATTTTGTTTTTGTCTTTTGTTTGTATTTT  544

seq1  TTGGTAAGTGTTGATTAAACTCATCATTTCTTGATCTGAGATTTGGGTAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAAGTGTTGATTAAACTCATCATTTCTTGATCTGAGATTTGGGTAG  594

seq1  TGTGACAGTTTGTGTAGTCTTCTCAGATTTGAATTAGGTTTAAGAGTGAC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAGTTTGTGTAGTCTTCTCAGATTTGAATTAGGTTTAAGAGTGAC  644

seq1  ACGAAGTAGGCCTGCCAGGTGTGTTATTTGCCCTTTATAGTTAAGTGAAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGTAGGCCTGCCAGGTGTGTTATTTGCCCTTTATAGTTAAGTGAAC  694

seq1  TGAGGCCAGATTCATGGCTGGGACTGGATTCTGTTTTCATTTTTACTTTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCAGATTCATGGCTGGGACTGGATTCTGTTTTCATTTTTACTTTT  744

seq1  TCTATCTGTTAAACACCTTGGAGGTGGTGAACATTGTCCAACAGAGGAGG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTGTTAAACACCTTGGAGGTGGTGAACATTGTCCAACAGAGGAGG  794

seq1  AGAAAGCGAAGTGACTGAAAGTGCTGGGTGTGGTGATGTATGCCTGCCTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCGAAGTGACTGAAAGTGCTGGGTGTGGTGATGTATGCCTGCCTG  844

seq1  CTTGTAGTTCCTTCATTCAGCACTTGGAAGGATCTGGAATTTAGGGTCAT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTAGTTCCTTCATTCAGCACTTGGAAGGATCTGGAATTTAGGGTCAT  894

seq1  TCACAGCCTACCTGGAGTGCATGAAACCCTGTTCAAAAAATGAACTAGAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCTACCTGGAGTGCATGAAACCCTGTTCAAAAAATGAACTAGAT  944

seq1  GATTTTGCACACCACGGAATGTTGTGTACCTGTTGCTCAGCAGCGAGGTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGCACACCACGGAATGTTGTGTACCTGTTGCTCAGCAGCGAGGTT  994

seq1  TGGGAGGAAGGTTCAGGAAGGCACGATGTGAGATCGTGAGCAGTGTAGAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGAAGGTTCAGGAAGGCACGATGTGAGATCGTGAGCAGTGTAGAG  1044

seq1  CCTTTAAGAAGGAATCTGCGTGTTGGGGAAATGCATGACCAAGTTTCAGG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAGAAGGAATCTGCGTGTTGGGGAAATGCATGACCAAGTTTCAGG  1094

seq1  TCGTGGAGGAGGGAGTTTCTCAGTCCGTAGTTGTATTGAGAACTTAATTG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGAGGAGGGAGTTTCTCAGTCCGTAGTTGTATTGAGAACTTAATTG  1144

seq1  TGTTTGTGCTCAGGTTCCAGTTGTGGGGAATTC  1174
      |||||||||||||||||||||||||||||||||
seq2  TGTTTGTGCTCAGGTTCCAGTTGTGGGGAATTC  1177

seq1: chr11_72362355_72362771
seq2: B6Ng01-264B11.g_70_486

seq1  GAATTCAAAAGCAACCTGATCTTACTTAAGACCTTGTCTCAAAAACAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGCAACCTGATCTTACTTAAGACCTTGTCTCAAAAACAAAC  50

seq1  AAACAAAGAAAAGAGGCTGGGTGGTTTCACCCCAGTAAGTGATCTGCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGAAAAGAGGCTGGGTGGTTTCACCCCAGTAAGTGATCTGCAGC  100

seq1  CTCTCCTGAATGGTCCCAAGCCAGAACAGGGCACAATGTGTGTGGGGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTGAATGGTCCCAAGCCAGAACAGGGCACAATGTGTGTGGGGGCA  150

seq1  GCGGTGTGAGTGGGTGGATGGGACTGTGCTCTGCAGCAAAGGCGTTGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTGTGAGTGGGTGGATGGGACTGTGCTCTGCAGCAAAGGCGTTGGGT  200

seq1  TCAGGATGGAGCTGCAGGCAAGGTTACGGAGGGCAGAGCAGCCCTCTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGGAGCTGCAGGCAAGGTTACGGAGGGCAGAGCAGCCCTCTACA  250

seq1  TCAGTTATTAGAGTGCTTATCCAGCATGCACAAAGACCCTGGGTTCAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTATTAGAGTGCTTATCCAGCATGCACAAAGACCCTGGGTTCAATC  300

seq1  CCTAGAACTTCATAAAGCATTGTGGTGGCAAGCCTGTAATCCCGGCCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAACTTCATAAAGCATTGTGGTGGCAAGCCTGTAATCCCGGCCCTA  350

seq1  AGAAGGTGAAGGCAAGCATATCAGCAGTTCATGATTATTCTCAGTTACAT  400
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  AGAAGGTGAAGGCAAGCATATCAGCAGTTCATGATTATTTTCATTTACAT  400

seq1  AGCGAGTTTGAATCTAG  417
      |||||||||||||||||
seq2  AGCGAGTTTGAATCTAG  417