BAC Information

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BAC

Clone NameB6Ng01-267H13
Chromosome11 (Build37)
Map Location 70,817,251 - 70,818,437
singlet/doubletsinglet
Overlap geneDhx33
Upstream geneDvl2, Acadvl, Dlg4, Asgr1, Asgr2, Mgl2, Mgl1, Slc16a11, Slc16a13, Bcl6b, 0610010K14Rik, D11Bwg0434e, Alox12, Alox12e, Alox15, LOC668466, Pelp1, Arrb2, Med11, Cxcl16, Zmynd15, Tm4sf5, Vmo1, C730027E14Rik, Psmb6, Pld2, Mink1, Chrne, LOC668433, Gp1ba, Slc25a11, Rnf167, Pfn1, Eno3, Spag7, Camta2, AI842396, Kif1c, LOC668488, Zfp3, A430084P05Rik, Rabep1, LOC668461, Nup88, Rpain, C1qbp
Downstream geneDerl2, Mis12, 6330403K07Rik, LOC382536, Nlrp1a, Nlrp1b, Nlrp1c, LOC100043249, 9230020A06Rik, Wscd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267H13.bB6Ng01-267H13.g
ACCGA070582GA070583
length1,1781,050
definitionB6Ng01-267H13.b B6Ng01-267H13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctggcgccagtctctccgtcctcgcttagaatgccggtccc
cagggacccgctccgcagctgcctcctcaaaagccttggtgaggcccatc
ctgcaaagctctctgagagcctccgatatgctccccacgcctcgtcacgg
aaggcgaatatcctcaaactcacagagcgcggtcagcgccggcagggtaa
ctctgtccgcctctttccagaggtccctgtccacaccgggcactgaaacc
ctttcaagtttgtggaagaaaccaacgcaaagaaagtgagaagcccctaa
gaaaccccgccctcgtgcacagagccagggatctagagcaaggaagatcc
accaaagccgccactcaccgatgaggaccgcgttgtccaggtttcggagc
tgagccaatagctgcccccgcgcccggaagatgggcagactccggcgctg
cagctccagggcctcgcggtagggactggccgaaggctgggccagcggcg
gcgtctgcctccggcctcctccagctccgccgccgccgccagccgtcaac
agcatcactactcgtctcccgggagggcaggagcccggccggaatctctt
agcgggcgggaggctcgcctcctccggcatgtcgggaggaccgcggccgg
aggcagggacgcagacagttccgctcggctggggacagcaagcgcgcacc
gcccctttctcgccacgtgcaggcgtgctgggcgaccaccgatgacctca
cagccgcctcctgccttgaggaaaggaactgcaattcccagcatgcgctg
tgcatttacatcctgtgagagcaaggtcggaggtgcgaccgaaaaaacgg
cccgagtaacaacaggggacgatagctgtgtggttccctagggtcttgtt
gcgtaatgacgttgtcctaaactctcatttctatccaataaaatgactgt
cccatctcgggctccaacaatagtcacgttttaaggcaattacttatttt
ctgtaaatctaacgaggacacaaacattactcttctaaacaatgtacggt
ttaggtaccactggtagcctccggatttatactgtagaaagtgaattttc
ctggagacttaagtcattcgatgctgcgagattgaatgctactagtgaga
atcttcagtacggaaaggggtgaattct
gaattcttggtttagctctttatcccatttttaatagagttatttggttc
tctgaagtctagcttcttgagttctttgtatatattggatattatccctg
tatcagatgtaggattggtcttttcccaatctgttaggtgtccttttgtc
ttattgacagtgtcctttgctttaaagaatctttgcaattttatgaggta
ccattggtcaattcttctttttaaagcataatcttttggtgttctgttca
gaaaattttcccctgtgaccatgtgctggaggctcctccccactttcttt
tctattattttcagtgtatctggttttatgtggaggtccttgatccacat
ggacttgaggtttgtacaaggagataagaatggattgatcaccatggact
aaggctaatcttcaatgacaacataaataatagaaagccaacattcacat
ggaagctgaacaacactaactcaatgataacttggtcaaggaaaaaagaa
gaaagaagttaaagactttttagagtttaatgaaaatgaaggcacaacat
actcaaacttatgggacacaatgaaagcattcctaagaggaaagctcata
gctctgagtgtcaccaaaaagaaactagagagaccacacactagcagctt
gacagcacacctaaaagcttctagaacaaaaggaatcaaattcatccatg
aggagtagatggcaggaaataatcaaactcagggctgaaatcaaccaagt
agaaacaaaaagaactgtacagagaatcaaccaaaacaggagctggtttt
tttgagaaaatcaacaagatagataaaccgtttagcccagaccaactaga
gggcacagagacggtatcctaattaacaaaatcagaaatgaaaagggaga
taccagaaaacctgatgaaattccaagcatcattcagatcctattacaaa
aggctatactctcaccaaactggaaaatcttggatgaaatggaacatttt
ggtaacatgatacaaggtatgcaaagttaaatcaggttctagaataatcg

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_70817251_70818437
seq2: B6Ng01-267H13.b_43_1220

seq1  GAATTCTTTCTGGCGCCAGTCTCTCCGTCCTCGCTTAGAATGCCGGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGGCGCCAGTCTCTCCGTCCTCGCTTAGAATGCCGGTCCC  50

seq1  CAGGGACCCGCTCCGCAGCTGCCTCCTCAAAAGCCTTGGTGAGGCCCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACCCGCTCCGCAGCTGCCTCCTCAAAAGCCTTGGTGAGGCCCATC  100

seq1  CTGCAAAGCTCTCTGAGAGCCTCCGATATGCTCCCCACGCCTCGTCACGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAGCTCTCTGAGAGCCTCCGATATGCTCCCCACGCCTCGTCACGG  150

seq1  AAGGCGAATATCCTCAAACTCACAGAGCGCGGTCAGCGCCGGCAGGGTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGAATATCCTCAAACTCACAGAGCGCGGTCAGCGCCGGCAGGGTAA  200

seq1  CTCTGTCCGCCTCTTTCCAGAGGTCCCTGTCCACACCGGGCACTGAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCCGCCTCTTTCCAGAGGTCCCTGTCCACACCGGGCACTGAAACC  250

seq1  CTTTCAAGTTTGTGGAAGAAACCAACGCAAAGAAAGTGAGAAGCCCCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAGTTTGTGGAAGAAACCAACGCAAAGAAAGTGAGAAGCCCCTAA  300

seq1  GAAACCCCGCCCTCGTGCACAGAGCCAGGGATCTAGAGCAAGGAAGATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCCGCCCTCGTGCACAGAGCCAGGGATCTAGAGCAAGGAAGATCC  350

seq1  ACCAAAGCCGCCACTCACCGATGAGGACCGCGTTGTCCAGGTTTCGGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGCCGCCACTCACCGATGAGGACCGCGTTGTCCAGGTTTCGGAGC  400

seq1  TGAGCCAATAGCTGCCCCCGCGCCCGGAAGATGGGCAGACTCCGGCGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAATAGCTGCCCCCGCGCCCGGAAGATGGGCAGACTCCGGCGCTG  450

seq1  CAGCTCCAGGGCCTCGCGGTAGGGACTGGCCGAAGGCTGGGCCAGCGGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCAGGGCCTCGCGGTAGGGACTGGCCGAAGGCTGGGCCAGCGGCG  500

seq1  GCGTCTGCCTCCGGCCTCCTCCAGCTCCGCCGCCGCCGCCAGCCGTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCTGCCTCCGGCCTCCTCCAGCTCCGCCGCCGCCGCCAGCCGTCAAC  550

seq1  AGCATCACTACTCGTCTCCCGGGAGGGCAGGAGCCCGGCCGGAATCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCACTACTCGTCTCCCGGGAGGGCAGGAGCCCGGCCGGAATCTCTT  600

seq1  AGCGGGCGGGAGGCTCGCCTCCTCCGGCATGTCGGGAGGACCGCGGCCGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGGCGGGAGGCTCGCCTCCTCCGGCATGTCGGGAGGACCGCGGCCGG  650

seq1  AGGCAGGGACGCAGACAGTTCCGCTCGGCTGGGGACAGCAAGCGCGCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGACGCAGACAGTTCCGCTCGGCTGGGGACAGCAAGCGCGCACC  700

seq1  GCCCCTTTCTCGCCACGTGCAGGCGTGCTGGGCGACCACCGATGACCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTTCTCGCCACGTGCAGGCGTGCTGGGCGACCACCGATGACCTCA  750

seq1  CAGCCGCCTCCTGCCTTGAGGAAAGGAACTGCAATTCCCAGCATGCGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGCCTCCTGCCTTGAGGAAAGGAACTGCAATTCCCAGCATGCGCTG  800

seq1  TGCATTTACATCCTGTGAGAGCAAGGTCGGAGGTGCGACCGAAAAAACGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTACATCCTGTGAGAGCAAGGTCGGAGGTGCGACCGAAAAAACGG  850

seq1  CCCGAGTAACAACAGGGGACGATAGCTGTGTGGTTCCCTAGGGTCTTGTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGTAACAACAGGGGACGATAGCTGTGTGGTTCCCTAGGGTCTTGTT  900

seq1  GCGTAATGACGTTGTCCTAAACTCTCATTTCTATCCAATAAAAATGACTG  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCGTAATGACGTTGTCCTAAACTCTCATTTCTATCCAAT-AAAATGACTG  949

seq1  TCCCATCTCGGGCTCCAACAATAGTCACGTTTTAAGGCAATTACTTA-TT  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCCATCTCGGGCTCCAACAATAGTCACGTTTTAAGGCAATTACTTATTT  999

seq1  TCTGTAAATCTAACGAGGAACACAAACATTTACTCTTCTAAACAATGTAC  1049
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  TCTGTAAATCTAACGAGG-ACACAAACA-TTACTCTTCTAAACAATGTAC  1047

seq1  GTTTTAAGGTACCCACTGGTAG-CTCC-GATTTATAAATGTAGAAAGTGA  1097
      | ||| ||||| |||||||||| |||| ||||||| | ||||||||||||
seq2  GGTTT-AGGTA-CCACTGGTAGCCTCCGGATTTAT-ACTGTAGAAAGTGA  1094

seq1  AATTTTCT-GAGACTAAAGTCATTTCGGATGCTGCAAAGAATTTTGAAAA  1146
      | ||| || |||||| ||||||||   ||||||||  |||   |||  ||
seq2  ATTTTCCTGGAGACTTAAGTCATT--CGATGCTGC-GAGA---TTG--AA  1136

seq1  TGCTACTAGTGAGTATCTTCAGTTACGGAAA--GGTGAATTCT  1187
      ||||||||||||| |||||||| ||||||||  ||||||||||
seq2  TGCTACTAGTGAGAATCTTCAG-TACGGAAAGGGGTGAATTCT  1178