BAC Information

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BAC

Clone NameB6Ng01-280O16
Chromosome11 (Build37)
Map Location 92,613,253 - 92,614,406
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC382545, LOC100039286, Car10, LOC629636
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280O16.bB6Ng01-280O16.g
ACCGA080527GA080528
length1,1561,004
definitionB6Ng01-280O16.b B6Ng01-280O16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctggaactcagagatctgcctgcc
tctgcctcccgagtgctgctatgtctgatttttggcaggtgtaagcttat
gtagtccttgtacaaacaaacacagccactgtgaattcatgagtatcagt
ggagcaaagtatgaagaaggcagtggaagtactgacacattccctgcaaa
aggaagccaagggctgtttttcctccaatggcccgttggaatgtattgtc
catattaatgctcagttttgcaaattgttactttccagaaatgctcttac
aagcatgcctaaaggaaatgtccttatggcatgcctacaggcatttccta
gggtggtcctaaatcttgtcaatttgaaaacttaaaatcaactattagaa
taattgtggtgtgttcagccctaattgaggcattatagtatgccactgat
tcatgggtttttagaactagaggttaatgaggacttctatgaagcatgtc
tatggatacaagattatgattctcatgaatacacagcagctgtggttgtt
tgcacaagaacttcataagctcaatccaggcaaaaatccagtaagatgga
gtagaggctctggaagtcctaaccctagctgaggaattttgacagttcaa
ggctactgggataggaagtcagtcttcttcagagacatatgatctatcag
gttgcccatgctccaagggaccacacaggatacgaatcagggggttacaa
gaagaaggcaagaagtttggggttgaatatgtgtccatgagtctggttca
gtaccctcaggagtgagaggtgcctgatagatcacctatctggacttaca
ggcaattgtgatcctcccaattttggtaccagtaatcaaactttgggtct
tctgcaagagtggtaagtgcttttaacttgtgtgccatgtctccctgtcc
caaatggttttattcaagttgcagaaatataatttcattcttcatttatt
tgggttttaaaaataagaaaatgtagtaagtgtaaaaaataagatcaacc
attagaataatcatgaccagctatgaaacaatttgataccttatactaca
accttgcatattgccttaatgtaattcaaaatatatggttattttatact
taaaga

gaattctcatattgcgttccctggactgtagagtgagggctattatggtt
ggaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagt
gaatcaaaaacagtatcgtattcctggaggaattgcagaaattactgcca
ctatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccg
tttaactctcctatctggccagtgcagaaaacagatggatcatggagaat
gacagttgattatcgaaaactaaatcaggtggtaactccaattgcagctg
ctgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggc
acctggtatgcggctattgatctggcaaatgccttcttctcagtacctgt
ccataaggaccaccagaagcaatttgctttcagttggcaaggccaacagt
ataccttcacagttttgcctcaaggatatattaactctcctgccctgtgt
cataatttagttagaagggatcttgatagtttggatcttccacaaaatat
cacattggtgcactatattgatgacattatgctgattggatcaagtgagc
aggaagtagcaaccactttggactcattggtaacacatatgcgtatcaga
ggatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaa
attcttaggagtccagtggtgtggggcatgcagagatattccttctaagg
tgaaagataagttattgcacctggcccctcctacaaccaagaaagaagca
caacgtttagtgggtctatttggattctggagacaacacatccctcactt
gggtgtgttacttagggcctatttaccaagtgactcggaaagctgctagc
ttttgtgtggggcctaggaacaggaaaaggcccttcaacaggttcagggc
tgctgtgcaagcttgctctaccactttggaaccatatggacccagcagac
cctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92613253_92614406
seq2: B6Ng01-280O16.b_46_1201 (reverse)

seq1  TCTTTTTAAAGTATAAAATAAACATTATATTTTGGAATTACATTAAGCAA  50
      |||||   ||||||||||||| || |||||||| |||||||||||||  |
seq2  TCTTT---AAGTATAAAATAACCA-TATATTTT-GAATTACATTAAGGCA  45

seq1  TTATGCAAAGGTTGTAGTATAA-GTATC-AATTGTTTCATAGCTGGTCAT  98
       ||||| ||||||||||||||| ||||| |||||||||||||||||||||
seq2  ATATGC-AAGGTTGTAGTATAAGGTATCAAATTGTTTCATAGCTGGTCAT  94

seq1  GATTATTCTAATTGTTGATCTTATTTTTTACACTTACTACATTTTC-TAT  147
      |||||||||||| ||||||||||||||||||||||||||||||||| |||
seq2  GATTATTCTAATGGTTGATCTTATTTTTTACACTTACTACATTTTCTTAT  144

seq1  TTTTAAAA-CCAAATAAATGAAG-ATG-AATTATATTTCTGC-ACTTGAA  193
      |||||||| |||||||||||||| ||| |||||||||||||| |||||||
seq2  TTTTAAAACCCAAATAAATGAAGAATGAAATTATATTTCTGCAACTTGAA  194

seq1  TAAAACCATTTGGGACAGGGAGACATGGCACACAAGTTAAAAGCACTTAC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATTTGGGACAGGGAGACATGGCACACAAGTTAAAAGCACTTAC  244

seq1  CACTCTTGCAGAAGA-CCAAAGTTTGATTACTGGTACCAAAATTGGGAGG  292
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CACTCTTGCAGAAGACCCAAAGTTTGATTACTGGTACCAAAATTGGGAGG  294

seq1  ATCACAATTGCCTGTAAGTCCAGATAGGTGATCTATCAGGCACCTCTCAC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATTGCCTGTAAGTCCAGATAGGTGATCTATCAGGCACCTCTCAC  344

seq1  TCCTGAGGGTACTGAACCAGACTCATGGACACATATTCAACCCCAAACTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAGGGTACTGAACCAGACTCATGGACACATATTCAACCCCAAACTT  394

seq1  CTTGCCTTCTTCTTGTAACCCCCTGATTCGTATCCTGTGTGGTCCCTTGG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTTCTTCTTGTAACCCCCTGATTCGTATCCTGTGTGGTCCCTTGG  444

seq1  AGCATGGGCAACCTGATAGATCATATGTCTCTGAAGAAGACTGACTTCCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGGCAACCTGATAGATCATATGTCTCTGAAGAAGACTGACTTCCT  494

seq1  ATCCCAGTAGCCTTGAACTGTCAAAATTCCTCAGCTAGGGTTAGGACTTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGTAGCCTTGAACTGTCAAAATTCCTCAGCTAGGGTTAGGACTTC  544

seq1  CAGAGCCTCTACTCCATCTTACTGGATTTTTGCCTGGATTGAGCTTATGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTCTACTCCATCTTACTGGATTTTTGCCTGGATTGAGCTTATGA  594

seq1  AGTTCTTGTGCAAACAACCACAGCTGCTGTGTATTCATGAGAATCATAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTGTGCAAACAACCACAGCTGCTGTGTATTCATGAGAATCATAAT  644

seq1  CTTGTATCCATAGACATGCTTCATAGAAGTCCTCATTAACCTCTAGTTCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATCCATAGACATGCTTCATAGAAGTCCTCATTAACCTCTAGTTCT  694

seq1  AAAAACCCATGAATCAGTGGCATACTATAATGCCTCAATTAGGGCTGAAC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCATGAATCAGTGGCATACTATAATGCCTCAATTAGGGCTGAAC  744

seq1  ACACCACAATTATTCTAATAGTTGATTTTAAGTTTTCAAATTGACAAGAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACAATTATTCTAATAGTTGATTTTAAGTTTTCAAATTGACAAGAT  794

seq1  TTAGGACCACCCTAGGAAATGCCTGTAGGCATGCCATAAGGACATTTCCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACCACCCTAGGAAATGCCTGTAGGCATGCCATAAGGACATTTCCT  844

seq1  TTAGGCATGCTTGTAAGAGCATTTCTGGAAAGTAACAATTTGCAAAACTG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCATGCTTGTAAGAGCATTTCTGGAAAGTAACAATTTGCAAAACTG  894

seq1  AGCATTAATATGGACAATACATTCCAACGGGCCATTGGAGGAAAAACAGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTAATATGGACAATACATTCCAACGGGCCATTGGAGGAAAAACAGC  944

seq1  CCTTGGCTTCCTTTTGCAGGGAATGTGTCAGTACTTCCACTGCCTTCTTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTTCCTTTTGCAGGGAATGTGTCAGTACTTCCACTGCCTTCTTC  994

seq1  ATACTTTGCTCCACTGATACTCATGAATTCACAGTGGCTGTGTTTGTTTG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTGCTCCACTGATACTCATGAATTCACAGTGGCTGTGTTTGTTTG  1044

seq1  TACAAGGACTACATAAGCTTACACCTGCCAAAAATCAGACATAGCAGCAC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGACTACATAAGCTTACACCTGCCAAAAATCAGACATAGCAGCAC  1094

seq1  TCGGGAGGCAGAGGCAGGCAGATCTCTGAGTTCCAGGCCAGCCTGGTCTA  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGAGGCAGAGGCAGGCAGATCTCTGAGTTCCAGGCCAGCCTGGTCTA  1144

seq1  CAAAGTGAATTC  1154
      ||||||||||||
seq2  CAAAGTGAATTC  1156


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