BAC Information

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BAC

Clone NameB6Ng01-282I22
Chromosome11 (Build37)
Map Location 54,941,625 - 55,133,496
singlet/doubletdoublet
Overlap geneSlc36a3, Slc36a2, Slc36a1, Fat2
Upstream geneP4ha2, LOC623647, Dbi-ps, Csf2, Il3, Acsl6, 4930404A10Rik, LOC100041400, LOC100041411, Fnip1, Rapgef6, Cdc42se2, LOC677786, LOC100041463, Lyrm7, Hint1, Gpx3, Tnip1, LOC667826, Anxa6, Ccdc69, Gm2a, LOC667832
Downstream geneSparc, Atox1, G3bp, Glra1, Nmur2, LOC100040816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282I22.bB6Ng01-282I22.g
ACCGA081742GA081743
length191698
definitionB6Ng01-282I22.b B6Ng01-282I22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,133,306 - 55,133,496)(54,941,625 - 54,942,322)
sequence
gaattccctttggcttaggggtgcagtgcaggagctcttgcccagcattc
cgaggtaggagagtcttgatctgatgttagattagttttctcaaaacagt
cctgcgtcttctcaagcaccctggaaggctctctgctaccaaggaaagga
aggaagaaagggaaagaaaggagggaggggaaggagaggga
gaattccacattcgtgatctcatctggttattggcagagctcagcgagga
gggtggggctggtgacattgtcctctttctattgctctggctttgggaaa
cctgaatgccaccatcaccccacccacttgaaaaagcccaaggctgtgat
gacccataaccatgataacagttgataatccacagagcttgctgtgtgcc
cagcagttttctaagtattttctgtatattaaagcaagcaattgctgcca
gagagtgcagtcattattcatgttgtccatcaaaggtttctaggcctttc
cttgcctggggtgggaagtgagagccttttcagctgaagtttgacgttta
agctgtagcacaggatgcttgggaagggcaggtggcattcaatggctctg
tcatgacaactagcaacaccctagttgtggctggcctattaaaaagagag
cctgcaccacggtggtgtgaaccaagagttaagagtggcagcatcatgaa
gctgtcctgactgataggaagaggcacgtgtgtaagccttactgtacaga
agggtgggaggcttgcccttggccatagaggaaccagaatgaagatccta
ttaattagctttagaatgtgtacttagtcagtaggagtcctacacctcct
ctagagatgccacctacagctgtttcctaggtggatgggtgggtgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_55133306_55133496
seq2: B6Ng01-282I22.b_43_233 (reverse)

seq1  TCCCTCTCCTTCCCCTCCCTCCTTTCTTTCCCTTTCTTCCTTCCTTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTCCTTCCCCTCCCTCCTTTCTTTCCCTTTCTTCCTTCCTTTCCT  50

seq1  TGGTAGCAGAGAGCCTTCCAGGGTGCTTGAGAAGACGCAGGACTGTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGCAGAGAGCCTTCCAGGGTGCTTGAGAAGACGCAGGACTGTTTTG  100

seq1  AGAAAACTAATCTAACATCAGATCAAGACTCTCCTACCTCGGAATGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTAATCTAACATCAGATCAAGACTCTCCTACCTCGGAATGCTGG  150

seq1  GCAAGAGCTCCTGCACTGCACCCCTAAGCCAAAGGGAATTC  191
      |||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGCTCCTGCACTGCACCCCTAAGCCAAAGGGAATTC  191

seq1: chr11_54941625_54942322
seq2: B6Ng01-282I22.g_66_763

seq1  GAATTCCACATTCGTGATCTCATCTGGTTATTGGCAGAGCTCAGCGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATTCGTGATCTCATCTGGTTATTGGCAGAGCTCAGCGAGGA  50

seq1  GGGTGGGGCTGGTGACATTGTCCTCTTTCTATTGCTCTGGCTTTGGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGGCTGGTGACATTGTCCTCTTTCTATTGCTCTGGCTTTGGGAAA  100

seq1  CCTGAATGCCACCATCACCCCACCCACTTGAAAAAGCCCAAGGCTGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATGCCACCATCACCCCACCCACTTGAAAAAGCCCAAGGCTGTGAT  150

seq1  GACCCATAACCATGATAACAGTTGATAATCCACAGAGCTTGCTGTGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCATAACCATGATAACAGTTGATAATCCACAGAGCTTGCTGTGTGCC  200

seq1  CAGCAGTTTTCTAAGTATTTTCTGTATATTAAAGCAAGCAATTGCTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTTTCTAAGTATTTTCTGTATATTAAAGCAAGCAATTGCTGCCA  250

seq1  GAGAGTGCAGTCATTATTCATGTTGTCCATCAAAGGTTTCTAGGCCTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGCAGTCATTATTCATGTTGTCCATCAAAGGTTTCTAGGCCTTTC  300

seq1  CTTGCCTGGGGTGGGAAGTGAGAGCCTTTTCAGCTGAAGTTTGACGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTGGGGTGGGAAGTGAGAGCCTTTTCAGCTGAAGTTTGACGTTTA  350

seq1  AGCTGTAGCACAGGATGCTTGGGAAGGGCAGGTGGCATTCAATGGCTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTAGCACAGGATGCTTGGGAAGGGCAGGTGGCATTCAATGGCTCTG  400

seq1  TCATGACAACTAGCAACACCCTAGTTGTGGCTGGCCTATTAAAAAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACAACTAGCAACACCCTAGTTGTGGCTGGCCTATTAAAAAGAGAG  450

seq1  CCTGCACCACGGTGGTGTGAACCAAGAGTTAAGAGTGGCAGCATCATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACCACGGTGGTGTGAACCAAGAGTTAAGAGTGGCAGCATCATGAA  500

seq1  GCTGTCCTGACTGATAGGAAGAGGCACGTGTGTAAGCCTTACTGTACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGACTGATAGGAAGAGGCACGTGTGTAAGCCTTACTGTACAGA  550

seq1  AGGGTGGGAGGCTTGCCCTTGGCCATAGAGGAACCAGAATGAAGATCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGGAGGCTTGCCCTTGGCCATAGAGGAACCAGAATGAAGATCCTA  600

seq1  TTAATTAGCTTTAGAATGTGTACTTAGTCAGTAGGAGTCCTACACCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAGCTTTAGAATGTGTACTTAGTCAGTAGGAGTCCTACACCTCCT  650

seq1  CTAGAGATGCCACCTACAGCTGTTTCCTAGGTGGATGGGTGGGTGGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGATGCCACCTACAGCTGTTTCCTAGGTGGATGGGTGGGTGGGT  698