BAC Information

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BAC

Clone NameB6Ng01-283A07
Chromosome11 (Build37)
Map Location 73,593,575 - 73,594,614
singlet/doubletsinglet
Overlap genenone
Upstream geneCyb5d2, Zzef1, LOC627119, Atp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1, Trpv3, Aspa, Spata22, Olfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380, Olfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389
Downstream geneOlfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4, E130309D14Rik, 1300001I01Rik, Pafah1b1, Mett10d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283A07.bB6Ng01-283A07.g
ACCGA082084GA082085
length1,0351,035
definitionB6Ng01-283A07.b B6Ng01-283A07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctaaaaacacactctgattttcaagatgatactcaattttata
aatagcactaaggtggtgtgagtactctggtgatgttgatatccatgctc
ttttggatacatgatttcttcaaaccttattaatctttaaaactaaaacc
ttactaaaagaaggcttaagcagtgcagcattgcccctatcctaaagtgt
tcttattgggttgaaatggaaaaacatgcccaataggtaatggtaataag
cctcatcattaacaaaaattatcaatgtaactgtggaacaaggtatttct
caaatatttcagtgtgttacaaagttccaaaatggcaaagaataatacca
tacctgaaaactgcccatcatgctatcataaaactggaagtgcaagatct
gtagtttagaagacagtaatgtccttcctgaaaatttatctaggatgaat
gaaggtgtattacgattcctgcttcagatcctggtcacctttattcatta
taagaacagaaaagaacatgctctgcagccaacatcttcttacatgtccc
cttcttgccatctatggacccaaagggctctgcatccctgaggaatcctg
atcttgtacaattacccaagacctatatagaaccaactttccaaagcccc
tgagatgggagccgttgatggtcactgatcagtccttgatatacttagta
agaaggaagaaaggaagagaaaatcagatgcatgcttacccttttcctgt
ttatgaaattcaaaggatttttgtgtgatccatcttagattgcagtagac
taagcccaatctatttaaaaaccactgaagtaattgtgaatgctgggccc
ttctctcatattctttttctattgtctcgttttctgtctcccagctagac
tgtcaattttgtgggattgggagttggtaagaagcattttttgttactct
ctaatttctaagaatataaaagcataaagtgtctttcattcctattctat
gaccttatggccgactgtcttcaattgggcatggt
gaattctaagttggtactaccactctgaaaatcagtctggtggttcctca
gaaaatttgtcatagtactacctgagctatactcctcctgggcatatacc
cagaagatgttccaacatgtaataaggacacatgctccactatgttcata
gaagccttatatataatagccagaagctggaaagaactcagatgtccctc
aacagaaaaatggacacagaaaaatgtggtacatttacacagtggaatac
tactcagatattaaaaacaataacttcatgaaatttgcaggcaaatggat
gaaacttgaaaatatcatcctgcgtgagatgactcagtcacaaaggaaca
aacacagtatatactcactgataagtggatattagcccaaaagttcagaa
tacccaagaatcaattcatagaccatatgaagcctaagaagaaggaagaa
caaaatgtggatgcttcaatgtttttttagaagggtaaacaaaatactca
caggaggaaatatggagacaaagtgtggagcagagactgaaggaaaagcc
atacagagactgtcctacctggggaaccatcccatatatagccaccaacc
cagacactattgtagatgcagggaagtgcttgctgatggaaacctgatat
ggctgtctccttagaagttcttccagagcctgacaaatgcagatgcttaa
gttctcagccaaccattggattgagttcagcaaatcacagatgaaggaga
tagagaagggactgaaggagttgaaggggttttatagccctatgaagaga
gcaacagtgtcaacaggccagatggccctggagctcacagggactgaacc
accaaccaaagaaatacaaacggagccacccatggagctggccacatatg
ttccagaggatagccttgttggacatcagtgggaaggagaggctcttggg
ccctgagggtgttcaattcagggatatgccaaggtggacgacaggagttg
gaatgggttggtcggagtaccactctaagagtcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_73593575_73594614
seq2: B6Ng01-283A07.b_48_1082

seq1  GAATTCTCTAAAAACACACTCTGATTTTCAAGATGATACTCAATTTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAAAACACACTCTGATTTTCAAGATGATACTCAATTTTATA  50

seq1  AATAGCACTAAGGTGGTGTGAGTACTCTGGTGATGTTGATATCCATGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCACTAAGGTGGTGTGAGTACTCTGGTGATGTTGATATCCATGCTC  100

seq1  TTTTGGATACATGATTTCTTCAAACCTTATTAATCTTTAAAACTAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGATACATGATTTCTTCAAACCTTATTAATCTTTAAAACTAAAACC  150

seq1  TTACTAAAAGAAGGCTTAAGCAGTGCAGCATTGCCCCTATCCTAAAGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAAAGAAGGCTTAAGCAGTGCAGCATTGCCCCTATCCTAAAGTGT  200

seq1  TCTTATTGGGTTGAAATGGAAAAACATGCCCAATAGGTAATGGTAATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGGGTTGAAATGGAAAAACATGCCCAATAGGTAATGGTAATAAG  250

seq1  CCTCATCATTAACAAAAATTATCAATGTAACTGTGGAACAAGGTATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCATTAACAAAAATTATCAATGTAACTGTGGAACAAGGTATTTCT  300

seq1  CAAATATTTCAGTGTGTTACAAAGTTCCAAAATGGCAAAGAATAATACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTTCAGTGTGTTACAAAGTTCCAAAATGGCAAAGAATAATACCA  350

seq1  TACCTGAAAACTGCCCATCATGCTATCATAAAACTGGAAGTGCAAGATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGAAAACTGCCCATCATGCTATCATAAAACTGGAAGTGCAAGATCT  400

seq1  GTAGTTTAGAAGACAGTAATGTCCTTCCTGAAAATTTATCTAGGATGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTAGAAGACAGTAATGTCCTTCCTGAAAATTTATCTAGGATGAAT  450

seq1  GAAGGTGTATTACGATTCCTGCTTCAGATCCTGGTCACCTTTATTCATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTGTATTACGATTCCTGCTTCAGATCCTGGTCACCTTTATTCATTA  500

seq1  TAAGAACAGAAAAGAACATGCTCTGCAGCCAACATCTTCTTACATGTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACAGAAAAGAACATGCTCTGCAGCCAACATCTTCTTACATGTCCC  550

seq1  CTTCTTGCCATCTATGGACCCAAAGGGCTCTGCATCCCTGAGGAATCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGCCATCTATGGACCCAAAGGGCTCTGCATCCCTGAGGAATCCTG  600

seq1  ATCTTGTACAATTACCCAAGACCTATATAGAACCAACTTTCCAAAGCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGTACAATTACCCAAGACCTATATAGAACCAACTTTCCAAAGCCCC  650

seq1  TGAGATGGGAGCCGTTGATGGTCACTGATCAGTCCTTGATATACTTAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGGAGCCGTTGATGGTCACTGATCAGTCCTTGATATACTTAGTA  700

seq1  AGAAGGAAGAAAGGAAGAGAAAATCAGATGCATGCTTACCCTTTTCCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAGAAAGGAAGAGAAAATCAGATGCATGCTTACCCTTTTCCTGT  750

seq1  TTATGAAATTCAAAGGATTTTTGTGTGATCCATCTTAGATTGCAGTAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAATTCAAAGGATTTTTGTGTGATCCATCTTAGATTGCAGTAGAC  800

seq1  TAAGCCCAATCTATTTAAAAACCACTGAAGTAATTGTGAATGCTGGTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||    
seq2  TAAGCCCAATCTATTTAAAAACCACTGAAGTAATTGTGAATGCTGG----  846

seq1  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAG  900
            || | |  | || ||||| | || | |  |||| | | |   ||
seq2  --GCCCTTCTCTCATATTCTTTTTCTATTGTCTCGTTTTCTGTCTCCCAG  894

seq1  CTAGACTGTCAA-TTTGTGGGATT-GGAGTTGTTAAG-AGCATTTTTTGT  947
      |||||||||||| ||||||||||| ||||||| |||| ||||||||||||
seq2  CTAGACTGTCAATTTTGTGGGATTGGGAGTTGGTAAGAAGCATTTTTTGT  944

seq1  TACTCTCTAAATTTTCTAAGAATAT-AAAGCATAAATTGTCTTTCATTTC  996
      ||||||||||  ||||||||||||| |||||||||| ||||||||| |||
seq2  TACTCTCTAA--TTTCTAAGAATATAAAAGCATAAAGTGTCTTTCA-TTC  991

seq1  CTATTCTTATGA-CTTAT-GCAGACTGTCTTCAATTTTGGCATGGT  1040
      |||||| ||||| ||||| || |||||||||||| || ||||||||
seq2  CTATTC-TATGACCTTATGGCCGACTGTCTTCAA-TTGGGCATGGT  1035