BAC Information

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BAC

Clone NameB6Ng01-283O12
Chromosome11 (Build37)
Map Location 30,456,057 - 30,457,117
singlet/doubletsinglet
Overlap geneAcyp2
Upstream gene1700034F02Rik, LOC666403, Rtn4, C230094A16Rik, 4931440F15Rik, Spnb2, EG666427, LOC666432, 4930505A04Rik
Downstream geneLOC654445, LOC666452, LOC666470, LOC631243, Psme4, Gpr75, LOC100042469, 4933407N01Rik, Asb3, Chac2, Stc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283O12.bB6Ng01-283O12.g
ACCGA082746GA082747
length1,0491,176
definitionB6Ng01-283O12.b B6Ng01-283O12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaacattgactgtttaattaaccttaaatggtgagaagagaaa
gcgtctaatataggaaagccctactctgttcttagattagaaatgatact
tgattttacataactacgaaaaaggcttctttagaatttgctggcttccc
acctcttttctaaaaatgtgacttagaaaaattacagaattggtctggat
gtcagcatttccctgaagctgacattttcagaccacattccccattagct
attcaaagtgaattttaggagtttgagaactggctttgtttgtgaggcca
gaatttagacactgacacaattttaaatcctgtaaggcacattgttctgt
aactctcagaaatagctaaagagctcttctctgcctctggccgggccagg
cccaccatctcatctcacatcatttgccactaaaattttaattcttagca
ggattaattttttttaatggaagaaagctgactaccatttggccagaaga
acttgatttatctcttatatctactataattttaatttatttatctttaa
tttagggaccaatacctagtcatttgtcaggcttggaattttgaggaact
tgttctttctcatattccatgatcctaaaggtctccgggggtggggtggg
gcggtaactgagcaaacattattccacttattaaacaaagcattgcattt
gggaatatttgaatatataagcaagagtaaagtaacagactgagaaagac
aaggcagatcctgcatgtgaggtatattcagagcgccatgttttacctct
tattccttacatgttaatccaagtgtgctgctctgcttcctttagaaact
gttggtaaagggagttggtgaggtggcttagctggtaaaggcacttgatg
acctagattgtatcctcaggattcatacctgcctcatgaaagatacttgc
acacatatgtctactcacagagagacacacagacacacatatgatacata
aaatatatatatatatatgaggaggagaagacagagaagaggagaggag
gaattctcacctgaggaatacagaatggctgagaagcacctgaacaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaaaat
tccacctcacaccagtcagaatggctaagataaaaaaactcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctgttggttcctc
agaaaattggacatattactaccggaggatcccgcaatacctctcctggg
catatacccagaagatattccaactggtaagaaggacacatgttccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacgat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatgggaggacctggagggcatcgtcttgagtgaggtaacccaatcacaa
aagaactcaaatgatatgttctcactgataagtggatattagcccagaaa
cttagaatacccaaaatataagatacaatttgctaaacgtatgaaactca
agaagaacgaagaccaaagtgtggacactttgtcccttcctagaattggg
agcaaaacacccatggaaggagttacagagacaaagtttggagctgagat
gaaaggatggaccattagagactgccatatccggggatccatcctgtaat
cagcttccaaacactgacaccattgcatacactagcaagattttgctgaa
aggacccagatgtggctgtctcttgtgagactatgctggggcctggcaaa
cagaagtggatgctcacagtcagctattggatggatcacagggccccaat
gggaggagctagagaaagtacccaagagctgagggatctgcatcctatag
tggaacacatatgaactaaccatatcccccacctctgggagctagtgtct
ctagcctgcatatgatcagaaggatggcctaattgcccatcagtgaagag
acgccattggatctgtccaaacttaatgcctcagttaccaggggaaatgc
cccagagcctaaagatattggtagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_30456057_30457117
seq2: B6Ng01-283O12.b_45_1093 (reverse)

seq1  CTCCTCTTCCTCTTCTTCCTGTTCTTTCTCCTCCTCATTATTATTATTAT  50
      |||||| |||||||||  ||||   ||||||||||||    |||   |||
seq2  CTCCTC-TCCTCTTCT--CTGT--CTTCTCCTCCTCA----TAT--ATAT  39

seq1  TATTATATTTTATGTATTCATATGTGTGTTCTGTGTGTCTCTCTGTGAGT  100
         ||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  ATATATATTTTATGTA-TCATATGTGTG-TCTGTGTGTCTCTCTGTGAGT  87

seq1  AGACATATGTGTGCAAGTATCTTTCATGAGGCAGGTATGAATCCTGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATATGTGTGCAAGTATCTTTCATGAGGCAGGTATGAATCCTGAGGA  137

seq1  TACAATCTAGGTCATCAAGTGCCTTTACCAGCTAAGCCACCTCACCAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATCTAGGTCATCAAGTGCCTTTACCAGCTAAGCCACCTCACCAACT  187

seq1  CCC-TTACCAACAGTTTCTAAAGGAAGCAGAGCAGCACACTTGGATTAAC  249
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTACCAACAGTTTCTAAAGGAAGCAGAGCAGCACACTTGGATTAAC  237

seq1  ATGTAAGGAATAAGAGGTAAAACATGGCGCTCTGAATATACCTCACATGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAGGAATAAGAGGTAAAACATGGCGCTCTGAATATACCTCACATGC  287

seq1  AGGATCTGCCTTGTCTTTCTCAGTCTGTTACTTTACTCTTGCTTATATAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTGCCTTGTCTTTCTCAGTCTGTTACTTTACTCTTGCTTATATAT  337

seq1  TCAAATATTCCCAAATGCAATGCTTTGTTTAATAAGTGGAATAATGTTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATATTCCCAAATGCAATGCTTTGTTTAATAAGTGGAATAATGTTTG  387

seq1  CTCAGTTACCGCCCCACCCCACCCCCGGAGACCTTTAGGATCATGGAATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTACCGCCCCACCCCACCCCCGGAGACCTTTAGGATCATGGAATA  437

seq1  TGAGAAAGAACAAGTTCCTCAAAATTCCAAGCCTGACAAATGACTAGGTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGAACAAGTTCCTCAAAATTCCAAGCCTGACAAATGACTAGGTA  487

seq1  TTGGTCCCTAAATTAAAGATAAATAAATTAAAATTATAGTAGATATAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCCTAAATTAAAGATAAATAAATTAAAATTATAGTAGATATAAGA  537

seq1  GATAAATCAAGTTCTTCTGGCCAAATGGTAGTCAGCTTTCTTCCATTAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATCAAGTTCTTCTGGCCAAATGGTAGTCAGCTTTCTTCCATTAAA  587

seq1  AAAAATTAATCCTGCTAAGAATTAAAATTTTAGTGGCAAATGATGTGAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAATCCTGCTAAGAATTAAAATTTTAGTGGCAAATGATGTGAGA  637

seq1  TGAGATGGTGGGCCTGGCCCGGCCAGAGGCAGAGAAGAGCTCTTTAGCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGGTGGGCCTGGCCCGGCCAGAGGCAGAGAAGAGCTCTTTAGCTA  687

seq1  TTTCTGAGAGTTACAGAACAATGTGCCTTACAGGATTTAAAATTGTGTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAGAGTTACAGAACAATGTGCCTTACAGGATTTAAAATTGTGTCA  737

seq1  GTGTCTAAATTCTGGCCTCACAAACAAAGCCAGTTCTCAAACTCCTAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAAATTCTGGCCTCACAAACAAAGCCAGTTCTCAAACTCCTAAAA  787

seq1  TTCACTTTGAATAGCTAATGGGGAATGTGGTCTGAAAATGTCAGCTTCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTTGAATAGCTAATGGGGAATGTGGTCTGAAAATGTCAGCTTCAG  837

seq1  GGAAATGCTGACATCCAGACCAATTCTGTAATTTTTCTAAGTCACATTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCTGACATCCAGACCAATTCTGTAATTTTTCTAAGTCACATTTT  887

seq1  TAGAAAAGAGGTGGGAAGCCAGCAAATTCTAAAGAAGCCTTTTTCGTAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGAGGTGGGAAGCCAGCAAATTCTAAAGAAGCCTTTTTCGTAGT  937

seq1  TATGTAAAATCAAGTATCATTTCTAATCTAAGAACAGAGTAGGGCTTTCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAAATCAAGTATCATTTCTAATCTAAGAACAGAGTAGGGCTTTCC  987

seq1  TATATTAGACGCTTTCTCTTCTCACCATTTAAGGTTAATTAAACAGTCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGACGCTTTCTCTTCTCACCATTTAAGGTTAATTAAACAGTCAA  1037

seq1  TGTTGAGAATTC  1061
      ||||||||||||
seq2  TGTTGAGAATTC  1049