BAC Information

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BAC

Clone NameB6Ng01-283P22
Chromosome11 (Build37)
Map Location 120,553,063 - 120,706,337
singlet/doubletdoublet
Overlap geneAspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57
Upstream gene4932417H02Rik, Chmp6, Baiap2, Aatk, Azi1, 2410002I01Rik, 1810043H04Rik, 1810073N04Rik, 2810410L24Rik, LOC100042332, LOC100043384, LOC100043389, Bahcc1, Actg1, Fscn2, 2310003H01Rik, Nploc4, Tspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik
Downstream geneLOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265, Fn3k, Tbcd, Zfp750, B3gntl1, Metrnl, Ptchd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283P22.bB6Ng01-283P22.g
ACCGA082810GA082811
length559591
definitionB6Ng01-283P22.b B6Ng01-283P22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,553,063 - 120,553,627)(120,705,764 - 120,706,337)
sequence
atagagatccacctgcctctgccttccaagtgctgggattaaaggcatgg
ccaccactgtctggctcacatctggcacttaaatgggcttggggaacctg
agagcccatccttacccttgctgtaaccactgaggcatctccttagcctc
cttgtttgagatacgtgtctttaggatgtagccagacgaccttgaatttg
taacccttctctctcatccatccagtgccaccaggccaggtctcctccaa
cattttctgtgtttttagggcagggtctctccatctcatggtttactgat
gtactgtctgaagtttgaccctccccattgcttatctccctcccacccag
catacatttagatcctagtactgctgtgcaagctgacatgtttcacagca
gcctgcagcctcatggcttctcgatgccttgtgctgttgctgcctctaac
aatcaccagtgaggtgggtggagagagagggagagggaatgagaatgtgt
taaaactgtattttatttattttgtgtgtgtgtgtatgtgtatgtgtact
tgagtgtaa
gaattcactttgtagaccaggctagcctcgaactcagaaattctcctgcc
tctgcctcccaagtgctgggattaaaggcgtgagctaccacgcccgacca
gatctctgagtttgagggcagcctgatctacatagtcagttccaggacat
ctaaggctacatagtgagaccctgtctccaaaaataaaaagaaagaaaaa
aagaacatgcctagcatcaaatcacaattttataagacatatgaagtgta
taaaaatatgatccataacagaggattctaatgcctaacgctgggtggtt
ggttggtgcggcacgcccttactcagcacttgggaggcagagacaggtgg
atttctgagtttgagactagcctggtctctgtagtgagttccgggaaagc
cagggctacacagagaaaccctgtctcggaagaaaaacaaacacaacaaa
aaaaaacatattggaccgtcttcatgtggggaccccccaacaataaaaat
tatttcgttgctatttcatatctgtaatttcattggtagatatctgtcat
gtgacccctcaaaggggtggatacccccagtgtagaaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_120553063_120553627
seq2: B6Ng01-283P22.b_49_613

seq1  GAATTCATAGAGATCCACCTGCCTCTGCCTTCCAAGTGCTGGGATTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGAGATCCACCTGCCTCTGCCTTCCAAGTGCTGGGATTAAAG  50

seq1  GCATGGCCACCACTGTCTGGCTCACATCTGGCACTTAAATGGGCTTGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGCCACCACTGTCTGGCTCACATCTGGCACTTAAATGGGCTTGGGG  100

seq1  AACCTGAGAGCCCATCCTTACCCTTGCTGTAACCACTGAGGCATCTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAGAGCCCATCCTTACCCTTGCTGTAACCACTGAGGCATCTCCTT  150

seq1  AGCCTCCTTGTTTGAGATACGTGTCTTTAGGATGTAGCCAGACGACCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCTTGTTTGAGATACGTGTCTTTAGGATGTAGCCAGACGACCTTG  200

seq1  AATTTGTAACCCTTCTCTCTCATCCATCCAGTGCCACCAGGCCAGGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAACCCTTCTCTCTCATCCATCCAGTGCCACCAGGCCAGGTCTC  250

seq1  CTCCAACATTTTCTGTGTTTTTAGGGCAGGGTCTCTCCATCTCATGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACATTTTCTGTGTTTTTAGGGCAGGGTCTCTCCATCTCATGGTTT  300

seq1  ACTGATGTACTGTCTGAAGTTTGACCCTCCCCATTGCTTATCTCCCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGTACTGTCTGAAGTTTGACCCTCCCCATTGCTTATCTCCCTCCC  350

seq1  ACCCAGCATACATTTAGATCCTAGTACTGCTGTGCAAGCTGACATGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGCATACATTTAGATCCTAGTACTGCTGTGCAAGCTGACATGTTTC  400

seq1  ACAGCAGCCTGCAGCCTCATGGCTTCTCGATGCCTTGTGCTGTTGCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGCCTGCAGCCTCATGGCTTCTCGATGCCTTGTGCTGTTGCTGCC  450

seq1  TCTAACAATCACCAGTGAGGTGGGTGGAGAGAGAGGGAGAGGGAATGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACAATCACCAGTGAGGTGGGTGGAGAGAGAGGGAGAGGGAATGAGA  500

seq1  ATGTGTTAAAACTGTATTTTATTTATTTTGTGTGTGTGTGTATGTGTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTAAAACTGTATTTTATTTATTTTGTGTGTGTGTGTATGTGTATG  550

seq1  TGTACTTGAGTGTAA  565
      |||||||||||||||
seq2  TGTACTTGAGTGTAA  565

seq1: chr11_120705764_120706337
seq2: B6Ng01-283P22.g_66_641 (reverse)

seq1  GGGTCTCCACCCCTTTGAGGGGTCACATGACAGATATCTA-CAATGAAAT  49
      |||| ||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGGTATCCACCCCTTTGAGGGGTCACATGACAGATATCTACCAATGAAAT  50

seq1  TACAGATATGAAATAGCAACGAAATAA-TTTTATTGTTGGGGGGTCACCA  98
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  TACAGATATGAAATAGCAACGAAATAATTTTTATTGTTGGGGGGTCCCCA  100

seq1  CATGAGGACTGTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG  148
      ||||| ||| |||   | | ||||||||| || | ||| ||||| ||  |
seq2  CATGAAGACGGTCCAATATGTTTTTTTTTGTTGTGTTTGTTTTTCTTCCG  150

seq1  AGACAGGGTTTCTCTGTGTAGCCCTGGCTTTCCTGGAACTCACTACAGAG  198
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGACAGGGTTTCTCTGTGTAGCCCTGGCTTTCCCGGAACTCACTACAGAG  200

seq1  ACCAGGCTAGTCTCAAACTCAGAAATCCACCTGTCTCTGCCTCCCAAGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTAGTCTCAAACTCAGAAATCCACCTGTCTCTGCCTCCCAAGTG  250

seq1  CTGAGTAAGGGCGTGCCGCACCAACCAACCACCCAGCGTTAGGCATTAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAAGGGCGTGCCGCACCAACCAACCACCCAGCGTTAGGCATTAGA  300

seq1  ATCCTCTGTTATGGATCATATTTTTATACACTTCATATGTCTTATAAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTGTTATGGATCATATTTTTATACACTTCATATGTCTTATAAAAT  350

seq1  TGTGATTTGATGCTAGGCATGTTCTTTTTTTCTTTCTTTTTATTTTTGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTGATGCTAGGCATGTTCTTTTTTTCTTTCTTTTTATTTTTGGA  400

seq1  GACAGGGTCTCACTATGTAGCCTTAGATGTCCTGGAACTGACTATGTAGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGTCTCACTATGTAGCCTTAGATGTCCTGGAACTGACTATGTAGA  450

seq1  TCAGGCTGCCCTCAAACTCAGAGATCTGGTCGGGCGTGGTAGCTCACGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTGCCCTCAAACTCAGAGATCTGGTCGGGCGTGGTAGCTCACGCC  500

seq1  TTTAATCCCAGCACTTGGGAGGCAGAGGCAGGAGAATTTCTGAGTTCGAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGCACTTGGGAGGCAGAGGCAGGAGAATTTCTGAGTTCGAG  550

seq1  GCTAGCCTGGTCTACAAAGTGAATTC  574
      ||||||||||||||||||||||||||
seq2  GCTAGCCTGGTCTACAAAGTGAATTC  576