BAC Information

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BAC

Clone NameB6Ng01-289M17
Chromosome11 (Build37)
Map Location 24,217,012 - 24,218,150
singlet/doubletsinglet
Overlap genenone
Upstream geneAhsa2, 1700093K21Rik, A730027B03Rik, 0610010F05Rik, Pex13, 4933435A13Rik, Rel, Papolg, A830031A19Rik, LOC100042256, Bcl11a
Downstream geneLOC100042282
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289M17.bB6Ng01-289M17.g
ACCGA087095GA087096
length1,1551,171
definitionB6Ng01-289M17.b B6Ng01-289M17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgtggcagaatatcccagcaagcttattaaaagcagattcct
ggaccccaatgccagccactgaaaggagatttctcctgactcttgaacat
ctatctctgtttgagtcaaaagcttgctcttgacttctaaagtttgtcac
agatggtccagtctaaagaaagtagcaaacccccaatgctttcccaccag
cccaagttcctatcctttttgtgttcctgcatagtgacccaacagcctgt
cttcagggagctgtgctctcgtcagcaaggatgaggctgtagagcactga
aggtcagaaaagggttaagtgagagagaagctgaggtgattgatgacaca
catttagagggcagaggcctgagagaagagaccagggtagacttaaggac
agggaggtacccaaatcctgggaactgtgaatagacaggaagtaggaaca
gcttacttctggtagcagatactagtgtggatgtgaactagagtacaatg
tgtctcacagagcattaactcagccaagcccttccttcaatactgtaaag
gttctggccttttcatgatgatacaacttgctcacctctctcagtgctgc
aaagctgctgtttatttgatttcatgtgtatactgtttttttcttgtgga
ggtagctatgggacagcagttcatcccttgatagtctttgttcccacaac
tctccaagagcatctggggccagcacggttgtagtatggcatgagaaacg
tgggagcagcaggcagggtggcaggacacaaggagacagccaggcacagg
gaagtgtgcagtggtggtacccattccccctcccatccttcctacatctg
ctgatgagcaaggctggggtgttctgaccttggcagacatggagaagtgt
gtgctctgcctgactcctgtctctagaggttacatagatttatccctact
gctttacatccgttctggaatgtggcagagtaaaaattgaaaataaataa
aatagatttatcagcactttctgagtttctataacatttggggggtggcc
agtagatgtgttttctctggacctgtaaggtcacagggtctcaaaggtgg
tgtgtgtgaggatgactaggactggttctatcctggagcttctctcccct
ctgag
gaattccaggagcttggtcacaccaggatctcaggatatcagaggaaact
tgactgctaagaactctgacacacccagaacttcagggtcccaaatcaca
ggatcacagagaaagctggactctgaggaattctgactcaaccaggttta
taggaaggaaaggctccaatcagatattgagagggcagggagcacttgag
ataatcagatggcaggggacaagcataagaacagaagcaacagaaaccaa
ggttacttggcatcatcagaacccaactctcccaccatagcaagtcctgg
atacaccatcacaccagaaaagcaagatatggatctaaagtcacttctca
tgataatgatggaggacatcataagaaggacataaataactcccttaaag
aaatacaggagaccacaggtaaaaaatgtaaaaaaaccttaaagaggaaa
cacaaaaatcccttaaagaattacaggaaaacacatccaaacaggtgaaa
gaattgaacaaaaccatccaggatctaagaatggaagtataaacaataaa
aaaaggagagagagacaattctggagatagaaaacctacgagagaagtaa
ggaaccatagatgaaagcatcaccaacagaatacaagagagaatcacagg
tgaagaagacaccatagaaaacattgacataacaatcaaagaatatgaga
aatgcaaaaagatcctaactcaaaacatccaggaaatccaggacacaatg
agaagaacaaacctaaggataatgggtatagacaagaacaaagatttcca
acttaaagggccagtatatatcttcaacaaaattatagaagaaaacttcc
ccaacctaaagaaagagatgaccatgaacataaaagaagcctacagaact
ccaaaagagtttggaacagaaaagatattcctcctgtcacataaaaatcg
aaacaccaactgcacaaaacaaaaggaagatttatttaaaatagtaaggg
gaaaagatcaagaattccacaaatggaacttcataaatggtaagcttctg
taaggcaaggacactgttaatagacaaaacagcaacaacagattggaaaa
gattctttaccaatcctaagtctgacgtggaatcatattccatttattac
aagaactcattgagaagttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_24217012_24218150
seq2: B6Ng01-289M17.b_48_1202

seq1  GAATTCCATGTGGCAGAATATCCCAGCAAGCTTATTAAAAGCAGATTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTGGCAGAATATCCCAGCAAGCTTATTAAAAGCAGATTCCT  50

seq1  GGACCCCAATGCCAGCCACTGAAAGGAGATTTCTCCTGACTCTTGAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCAATGCCAGCCACTGAAAGGAGATTTCTCCTGACTCTTGAACAT  100

seq1  CTATCTCTGTTTGAGTCAAAAGCTTGCTCTTGACTTCTAAAGTTTGTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTCTGTTTGAGTCAAAAGCTTGCTCTTGACTTCTAAAGTTTGTCAC  150

seq1  AGATGGTCCAGTCTAAAGAAAGTAGCAAACCCCCAATGCTTTCCCACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTCCAGTCTAAAGAAAGTAGCAAACCCCCAATGCTTTCCCACCAG  200

seq1  CCCAAGTTCCTATCCTTTTTGTGTTCCTGCATAGTGACCCAACAGCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTTCCTATCCTTTTTGTGTTCCTGCATAGTGACCCAACAGCCTGT  250

seq1  CTTCAGGGAGCTGTGCTCTCGTCAGCAAGGATGAGGCTGTAGAGCACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGGAGCTGTGCTCTCGTCAGCAAGGATGAGGCTGTAGAGCACTGA  300

seq1  AGGTCAGAAAAGGGTTAAGTGAGAGAGAAGCTGAGGTGATTGATGACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGAAAAGGGTTAAGTGAGAGAGAAGCTGAGGTGATTGATGACACA  350

seq1  CATTTAGAGGGCAGAGGCCTGAGAGAAGAGACCAGGGTAGACTTAAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGAGGGCAGAGGCCTGAGAGAAGAGACCAGGGTAGACTTAAGGAC  400

seq1  AGGGAGGTACCCAAATCCTGGGAACTGTGAATAGACAGGAAGTAGGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGTACCCAAATCCTGGGAACTGTGAATAGACAGGAAGTAGGAACA  450

seq1  GCTTACTTCTGGTAGCAGATACTAGTGTGGATGTGAACTAGAGTACAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTTCTGGTAGCAGATACTAGTGTGGATGTGAACTAGAGTACAATG  500

seq1  TGTCTCACAGAGCATTAACTCAGCCAAGCCCTTCCTTCAATACTGTAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCACAGAGCATTAACTCAGCCAAGCCCTTCCTTCAATACTGTAAAG  550

seq1  GTTCTGGCCTTTTCATGATGATACAACTTGCTCACCTCTCTCAGTGCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGCCTTTTCATGATGATACAACTTGCTCACCTCTCTCAGTGCTGC  600

seq1  AAAGCTGCTGTTTATTTGATTTCATGTGTATACTGTTTTTTTCTTGTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGCTGTTTATTTGATTTCATGTGTATACTGTTTTTTTCTTGTGGA  650

seq1  GGTAGCTATGGGACAGCAGTTCATCCCTTGATAGTCTTTGTTCCCACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTATGGGACAGCAGTTCATCCCTTGATAGTCTTTGTTCCCACAAC  700

seq1  TCTCCAAGAGCATCTGGGGCCAGCACGGTTGTAGTATGGCATGAGAAACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAAGAGCATCTGGGGCCAGCACGGTTGTAGTATGGCATGAGAAACG  750

seq1  TGGGAGCAGCAGGCAGGGTGGCAGGACACAAGGAGACAGCCAGGCACAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCAGCAGGCAGGGTGGCAGGACACAAGGAGACAGCCAGGCACAGG  800

seq1  GAAGTGTGCAGTGGTGGTACCCATTCCCCCTCCCATCCTTCCTACATCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTGCAGTGGTGGTACCCATTCCCCCTCCCATCCTTCCTACATCTG  850

seq1  CTGATGAGCAAGGCTGGGGTGTTCTGACCTTGGCAGACATGGAGAAGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGAGCAAGGCTGGGGTGTTCTGACCTTGGCAGACATGGAGAAGTGT  900

seq1  GTGCTCTGCCTGACTCCTGTCTCTAGAGGTTACATAGATTTATCCCTACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTGCCTGACTCCTGTCTCTAGAGGTTACATAGATTTATCCCTACT  950

seq1  GCTTTACATCCGTTCTGGAATGTGGCAGAGTATAAATTGAAAATAAATAA  1000
      |||||||||||||||||||||||||||||||| ||||||||||||||| |
seq2  GCTTTACATCCGTTCTGGAATGTGGCAGAGTAAAAATTGAAAATAAAT-A  999

seq1  AAATAGATTTATCAGCACTTTCTGAGTTTCTATAACATTT-GGGGGTGG-  1048
      |||||||||||||||||||||||||||||||||||||||| |||||||| 
seq2  AAATAGATTTATCAGCACTTTCTGAGTTTCTATAACATTTGGGGGGTGGC  1049

seq1  CAGTAGATGTG-TTTCTCTGAACCCTGT-AGGT--CAGGGTC---AA---  1088
      ||||||||||| |||||||| | ||||| ||||  |||||||   ||   
seq2  CAGTAGATGTGTTTTCTCTGGA-CCTGTAAGGTCACAGGGTCTCAAAGGT  1098

seq1  GGTGTGTGTGAAGATAGACTAGGACTG--TC-ATCCT-GAGCTCCT---C  1131
      ||||||||||| ||| |||||||||||  || ||||| ||||| ||   |
seq2  GGTGTGTGTGAGGAT-GACTAGGACTGGTTCTATCCTGGAGCTTCTCTCC  1147

seq1  CCTCTGAG  1139
      ||||||||
seq2  CCTCTGAG  1155