BAC Information

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BAC

Clone NameB6Ng01-291D15
Chromosome11 (Build37)
Map Location 11,366,272 - 11,367,443
singlet/doubletsinglet
Overlap geneEG432534
Upstream geneVwc2, Zpbp, LOC625132
Downstream gene4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10, Cobl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291D15.bB6Ng01-291D15.g
ACCGA088169GA088170
length1,1901,164
definitionB6Ng01-291D15.b B6Ng01-291D15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaacctggaatatatagaaagatctgatttcaaaaactg
aaccaaaccaaaccagtaaatgaactattgaagaacagtgaaagtatttt
ccacaacagctctgccatttttcatttgattgtagtgtttgatggctgca
tattctcaacgattcttctctcttgctttggtgtgaataaagtggtaact
catggtggctatcatttgaactaatttaatgaatgatgctgaatatcttt
ttgtgtgatgttgaccatttgtatatcaattttcaaaaacatctattgaa
gtacctggctagcctgggatgcaaaagaccttctctcaacaacaacaaca
acaatcaccaacaaaaacaatcccgtggcatgtacattcaatgaaatatc
cttcagttacaagataaatgatacatgattacttcatgctacaaaattat
tatgtcatgtgaatgaaggctgacacaaattctatttaattttttcaaga
atgtcgtacatgagtatactgcattgcattgtttctaccattcctttccc
cctttccaatgtctgctacatctgatcccccattccttctctaatttgta
cctgttctataattattattgtcacataaacgtgcatgtacatatatctg
gatatatttgtgtacacacacactttcaagtctagatactattgtctaca
tgtacttgtgtttagatcatgtaggattggatattctatcagggataacc
taacgggtgagaaacttattctccctccatcagcagacatttattgcctg
aagttcttcatctagaggtgagagcttatgaaatctttttccatctgtga
tggtgtgttgactggtgtggttgtgcaggtcttgtgaaaggcaacaagat
tttcgaatgtttgtgggtacagaatccttgtcatgtctagaagacactat
ctgacagcaaacatcccagttgtctagctcttacatctttctgtgtggga
gccgcaacgccattacagatggcgctggtttctatagcctacgcccatga
tatggtaataccaatggtgtgcatgtgcataagagttttttgcagtcact
gctggacgagcatatatgagtactggtagcctacatcaggatgaacgttc
attcttaggccttaattaagccagtcattttcctgggggc
gaattctcactccaagagactttaagctgaaaaaaggacttattaaagga
actaaattaccaaaatggtttttataagcatggcaataacaacttagaag
caaatttagaatttatctggaaggtatattttactgcctgattagaataa
aacctctgtgtttaagcttcaagataaatgcaatatgggattgactccca
tctttatctgttatgtgacctggatctacttaaaaatctctgtctacctg
tgtatccttacttataaactaagggaagtaattcatatcatgttgccaat
gaccattttatgattcgtgtaaaaataattaatgtgaaaaacagaaccaa
tgtggccagatagcataaattaagccccagaaaattcagttgcttcctat
gttaattggaaacaacaatatgcatcttacaaaattctaagaattaaaat
gtataatggccaggaaattttctggaacctgaaagaatattcaacaaata
atagccattattattaattattatcttctaacagtttcaaagagtaatac
ttgagatttgtggattgagttccacataattttcaagtgtttcaatgact
ttgaagaccctaaaaatatttattaagcataaatgactagtatgtcagat
ttcagaaaaaaaagattcacatccccaataaatcctgacaaagaaagaaa
tcttaaactgtattatactacactcagtattatctttttgttattgttaa
ttactttatttatttataccccaaatgttgcaccctctcccattccccct
ggaagagttcttcctctcctaccccttctttaatctttgagagggtgcca
cccccagacatctcccctccttgggccatcaagtctctacaagaatagac
acattctctcccactgagtccagacaaggtaaccctctgctacatatgtg
ccaggggcctctgaccagcccgtgcatgctctttggttggcttagtctct
gggagctcccaggggtctaagttagttgacgctgttgtcttcctatgagt
ggcatccccttcagtccttcccataactcttcacagggtttccaaactca
gtctatgcctgctgttgtattcttgcattcgtctcagttagctgctgatc
agctttcgtaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_11366272_11367443
seq2: B6Ng01-291D15.g_68_1231

seq1  GAATTCTCACTCCAAGAGACTTTAAGCTGAAAAAAGGACTTATTAAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACTCCAAGAGACTTTAAGCTGAAAAAAGGACTTATTAAAGGA  50

seq1  ACTAAATTACCAAAATGGTTTTTATAAGCATGGCAATAACAACTTAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATTACCAAAATGGTTTTTATAAGCATGGCAATAACAACTTAGAAG  100

seq1  CAAATTTAGAATTTATCTGGAAGGTATATTTTACTGCCTGATTAGAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTAGAATTTATCTGGAAGGTATATTTTACTGCCTGATTAGAATAA  150

seq1  AACCTCTGTGTTTAAGCTTCAAGATAAATGCAATATGGGATTGACTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCTGTGTTTAAGCTTCAAGATAAATGCAATATGGGATTGACTCCCA  200

seq1  TCTTTATCTGTTATGTGACCTGGATCTACTTAAAAATCTCTGTCTACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATCTGTTATGTGACCTGGATCTACTTAAAAATCTCTGTCTACCTG  250

seq1  TGTATCCTTACTTATAAACTAAGGGAAGTAATTCATATCATGTTGCCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCTTACTTATAAACTAAGGGAAGTAATTCATATCATGTTGCCAAT  300

seq1  GACCATTTTATGATTCGTGTAAAAATAATTAATGTGAAAAACAGAACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTTTATGATTCGTGTAAAAATAATTAATGTGAAAAACAGAACCAA  350

seq1  TGTGGCCAGATAGCATAAATTAAGCCCCAGAAAATTCAGTTGCTTCCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCAGATAGCATAAATTAAGCCCCAGAAAATTCAGTTGCTTCCTAT  400

seq1  GTTAATTGGAAACAACAATATGCATCTTACAAAATTCTAAGAATTAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTGGAAACAACAATATGCATCTTACAAAATTCTAAGAATTAAAAT  450

seq1  GTATAATGGCCAGGAAATTTTCTGGAACCTGAAAGAATATTCAACAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAATGGCCAGGAAATTTTCTGGAACCTGAAAGAATATTCAACAAATA  500

seq1  ATAGCCATTATTATTAATTATTATCTTCTAACAGTTTCAAAGAGTAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCATTATTATTAATTATTATCTTCTAACAGTTTCAAAGAGTAATAC  550

seq1  TTGAGATTTGTGGATTGAGTTCCACATAATTTTCAAGTGTTTCAATGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATTTGTGGATTGAGTTCCACATAATTTTCAAGTGTTTCAATGACT  600

seq1  TTGAAGACCCTAAAAATATTTATTAAGCATAAATGACTAGTATGTCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGACCCTAAAAATATTTATTAAGCATAAATGACTAGTATGTCAGAT  650

seq1  TTCAGAAAAAAAAGATTCACATCCCCAATAAATCCTGACAAAGAAAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAAAAAAAGATTCACATCCCCAATAAATCCTGACAAAGAAAGAAA  700

seq1  TCTTAAACTGTATTATACTACACTCAGTATTATCTTTTTGTTATTGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAACTGTATTATACTACACTCAGTATTATCTTTTTGTTATTGTTAA  750

seq1  TTACTTTATTTATTTATACCCCAAATGTTGCACCCTCTCCCATTCCCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTATTTATTTATACCCCAAATGTTGCACCCTCTCCCATTCCCCCT  800

seq1  GGAAGAGTTCTTCCTCTCCTACCCCTTCTTTAATCTTTGAGAGGGTGCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTTCTTCCTCTCCTACCCCTTCTTTAATCTTTGAGAGGGTGCCA  850

seq1  CCCCCAGACATCTCCCCTCCTTGGGCCATCAAGTCTCTACAAGAATAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGACATCTCCCCTCCTTGGGCCATCAAGTCTCTACAAGAATAGAC  900

seq1  ACATTCTCTCCCACTGAGTCCAGACAAGGTAACCCTCTGCTACATATGTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTCTCCCACTGAGTCCAGACAAGGTAACCCTCTGCTACATATGTG  950

seq1  CCAGGGGCCTCTGACCAGCCCGTGCATGCTCTTTGGTTGGCTTAGTCTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGCCTCTGACCAGCCCGTGCATGCTCTTTGGTTGGCTTAGTCTCT  1000

seq1  GGGAGCTCCCAGGGGTCTAAGTTAGTTGACGCTGTTGGTCTTCCTATGAG  1050
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGGAGCTCCCAGGGGTCTAAGTTAGTTGACGCTGTT-GTCTTCCTATGAG  1049

seq1  GTTGCCATCCCCTTCAGTCCTTCCCATAACTCTTCCACAGGGGTTTCCAA  1100
        || ||||||||||||||||||||||||||||| |||| ||||||||||
seq2  --TGGCATCCCCTTCAGTCCTTCCCATAACTCTT-CACA-GGGTTTCCAA  1095

seq1  ACCTCAGTCTAATGCTTGGCTGTGGGTATC-TGCATCTGTCTCAGTTAGC  1149
      | |||||||| |||| | ||||| |   || |||||  ||||||||||||
seq2  A-CTCAGTCT-ATGCCT-GCTGTTGTATTCTTGCATTCGTCTCAGTTAGC  1142

seq1  TGCTGATACAGCCTTCGTAAGGA  1172
      ||||||| |||| ||||||||||
seq2  TGCTGAT-CAGCTTTCGTAAGGA  1164