BAC Information

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BAC

Clone NameB6Ng01-291N01
Chromosome11 (Build37)
Map Location 117,134,135 - 117,134,981
singlet/doubletsinglet
Overlap genenone
Upstream geneSrp68, Galr2, Exoc7, Foxj1, LOC668255, 1110014K08Rik, Qrich2, Prpsap1, LOC629971, Sphk1, Ube2o, Aanat, Rhbdf2, Cygb, OTTMUSG00000003947, 1810032O08Rik, St6galnac2, LOC634720, BC018473, St6galnac1, Mxra7, Jmjd6, 1110005A03Rik, LOC100043293, Sfrs2, Mfsd11, Mgat5b, LOC100042036, Sec14l1
Downstream geneSept9, EG667423, Tnrc6c, Tmc6, Tmc8, 6030468B19Rik, Syngr2, Tk1, Afmid, Birc5, LOC546519, Tha1, Socs3, Pgs1, Dnahc17, Pscd1, Usp36
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291N01.b
ACCGA088607
length847
definitionB6Ng01-291N01.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgcagtcacagtcttagatgctgaaggatttgtcatcttgtt
ggccctggacaccccagacacccagagggcatttctgggccttggctgtt
taatttggtctggacagaacccggaggctccattcagtcgggaaccaaca
gatattctagaaacttcaagtttgttgtcatgttttaagagtaccactaa
ttctcaagaatttcaggagacagaacgaccttgtttctgctagaaaatat
aaacatgtagttccgcctgcgccctggctctctggggaacatgggggggg
cacaaaagtaggtaaggtgttctttctccccccgcccccttcttcataaa
agggagagcgacaggaagggaggggaaaacttaaagatttatttttattt
tgtgtgtatgggtgtttgcctgcctgtttatgtgcactatgtgcatgcct
gatgcttgaggaggtcagaagtggacattaaatctcccagtactggaatt
acagacagttgggaagctgctgcatatgtgctgggaaccaaacccgaacc
ctctgcaagagcagccagtgctctaaccactgagccatctctccagcacc
acttgctcttttctctgtcgatggtcctggaattaactcagtctccctcc
tcagacttccctggcttctttggcctacaatccaggaactacagggctgt
ggtcctaagtgttcagccttattcctgtgcccctatagcattcagcttct
cgtgtctccaagactgagtcttgaggtttcagtgagaccttgaactctga
ccatctgctcctttgactgcaagtgggggcgggggcgggggtgggga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_117134135_117134981
seq2: B6Ng01-291N01.b_47_893

seq1  GAATTCTCTGCAGTCACAGTCTTAGATGCTGAAGGATTTGTCATCTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCAGTCACAGTCTTAGATGCTGAAGGATTTGTCATCTTGTT  50

seq1  GGCCCTGGACACCCCAGACACCCAGAGGGCATTTCTGGGCCTTGGCTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGACACCCCAGACACCCAGAGGGCATTTCTGGGCCTTGGCTGTT  100

seq1  TAATTTGGTCTGGACAGAACCCGGAGGCTCCATTCAGTCGGGAACCAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGGTCTGGACAGAACCCGGAGGCTCCATTCAGTCGGGAACCAACA  150

seq1  GATATTCTAGAAACTTCAAGTTTGTTGTCATGTTTTAAGAGTACCACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTCTAGAAACTTCAAGTTTGTTGTCATGTTTTAAGAGTACCACTAA  200

seq1  TTCTCAAGAATTTCAGGAGACAGAACGACCTTGTTTCTGCTAGAAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAGAATTTCAGGAGACAGAACGACCTTGTTTCTGCTAGAAAATAT  250

seq1  AAACATGTAGTTCCGCCTGCGCCCTGGCTCTCTGGGGAACATGGGGGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGTAGTTCCGCCTGCGCCCTGGCTCTCTGGGGAACATGGGGGGGG  300

seq1  CACAAAAGTAGGTAAGGTGTTCTTTCTCCCCCCGCCCCCTTCTTCATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAGTAGGTAAGGTGTTCTTTCTCCCCCCGCCCCCTTCTTCATAAA  350

seq1  AGGGAGAGCGACAGGAAGGGAGGGGAAAACTTAAAGATTTATTTTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGCGACAGGAAGGGAGGGGAAAACTTAAAGATTTATTTTTATTT  400

seq1  TGTGTGTATGGGTGTTTGCCTGCCTGTTTATGTGCACTATGTGCATGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTATGGGTGTTTGCCTGCCTGTTTATGTGCACTATGTGCATGCCT  450

seq1  GATGCTTGAGGAGGTCAGAAGTGGACATTAAATCTCCCAGTACTGGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTTGAGGAGGTCAGAAGTGGACATTAAATCTCCCAGTACTGGAATT  500

seq1  ACAGACAGTTGGGAAGCTGCTGCATATGTGCTGGGAACCAAACCCGAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGTTGGGAAGCTGCTGCATATGTGCTGGGAACCAAACCCGAACC  550

seq1  CTCTGCAAGAGCAGCCAGTGCTCTAACCACTGAGCCATCTCTCCAGCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAAGAGCAGCCAGTGCTCTAACCACTGAGCCATCTCTCCAGCACC  600

seq1  ACTTGCTCTTTTCTCTGTCGATGGTCCTGGAATTAACTCAGTCTCCCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTCTTTTCTCTGTCGATGGTCCTGGAATTAACTCAGTCTCCCTCC  650

seq1  TCAGACTTCCCTGGCTTCTTTGGCCTACAATCCAGGAACTACAGGGCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTTCCCTGGCTTCTTTGGCCTACAATCCAGGAACTACAGGGCTGT  700

seq1  GGTCCTAAGTGTTCAGCCTTATTCCTGTGCCCCTATAGCATTCAGCTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTAAGTGTTCAGCCTTATTCCTGTGCCCCTATAGCATTCAGCTTCT  750

seq1  CGTGTCTCCAAGACTGAGTCTTGAGGTTTCAGTGAGACCTTGAACTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTCTCCAAGACTGAGTCTTGAGGTTTCAGTGAGACCTTGAACTCTGA  800

seq1  CCATCTGCTCCTTTGACTGCAAGTGGGGGCGGGGGCGGGGGTGGGGA  847
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGCTCCTTTGACTGCAAGTGGGGGCGGGGGCGGGGGTGGGGA  847