BAC Information

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BAC

Clone NameB6Ng01-292J06
Chromosome11 (Build37)
Map Location 116,884,600 - 116,885,114
singlet/doubletsinglet
Overlap genenone
Upstream geneH3f3b, Unk, Unc13d, Wbp2, Trim47, Trim65, Mrpl38, Fbf1, Acox1, 2310004N24Rik, Cdk3, Evpl, Srp68, Galr2, Exoc7, Foxj1, LOC668255, 1110014K08Rik, Qrich2, Prpsap1, LOC629971, Sphk1, Ube2o, Aanat, Rhbdf2, Cygb, OTTMUSG00000003947, 1810032O08Rik, St6galnac2, LOC634720, BC018473, St6galnac1, Mxra7, Jmjd6, 1110005A03Rik, LOC100043293, Sfrs2, Mfsd11, Mgat5b
Downstream geneLOC100042036, Sec14l1, Sept9, EG667423, Tnrc6c, Tmc6, Tmc8, 6030468B19Rik, Syngr2, Tk1, Afmid, Birc5, LOC546519, Tha1, Socs3, Pgs1, Dnahc17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292J06.g
ACCGA089181
length731
definitionB6Ng01-292J06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagcccattggcagctgacgataaaggacgctgaacatttttt
cgggtgcttctcggccatttggtatccctcaggtgagaattctttgtgta
cctctgagccccattttttaatggggctatttgatttttctggatggagt
ctaccttcttgagttctatctatatatatatatatatatatatatatata
tatatatatatcgatattacagccatggacttcctaagctctatcccaaa
aagcctccatgtggatgctgcttttgatccatctgattaggcaaaaggga
aagggcattgtcaaggctgtaggacacaccctctggcacactggtcctgc
atgtcacagacagtgggtggccatcagacaatgtcaacgcagggccattg
acttgatcgagggcctctgcagcatgtcctcaacctgtaatgacacaggc
tctctggaatgaggaatgcatggatagttgttgtcgtggtacaggagaaa
acctaaatggcaaaaaaaaaattggaaggaacatactgaggctggagaga
tggctcagtggttaagggcaccagctgctcttgcagaggatctgggttca
gttcccaaaacccacatagcggctcacaaccatctataactccagttcca
ggggatccaatgccctctactggccactgtgggtactgcacatacatgat
gcacttaaactcacacagacatatagatatt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_116884600_116885114
seq2: B6Ng01-292J06.g_282_796

seq1  ATTACAGCCATGGACTTCCTAAGCTCTATCCCAAAAAGCCTCCATGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGCCATGGACTTCCTAAGCTCTATCCCAAAAAGCCTCCATGTGGA  50

seq1  TGCTGCTTTTGATCCATCTGATTAGGCAAAAGGGAAAGGGCATTGTCAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTTTTGATCCATCTGATTAGGCAAAAGGGAAAGGGCATTGTCAAG  100

seq1  GCTGTAGGACACACCCTCTGGCACACTGGTCCTGCATGTCACAGACAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGGACACACCCTCTGGCACACTGGTCCTGCATGTCACAGACAGTG  150

seq1  GGTGGCCATCAGACAATGTCAACGCAGGGCCATTGACTTGATCGAGGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCATCAGACAATGTCAACGCAGGGCCATTGACTTGATCGAGGGCC  200

seq1  TCTGCAGCATGTCCTCAACCTGTAATGACACAGGCTCTCTGGAATGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGCATGTCCTCAACCTGTAATGACACAGGCTCTCTGGAATGAGGA  250

seq1  ATGCATGGATAGTTGTTGTCGTGGTACAGGAGAAAACCTAAATGGCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGGATAGTTGTTGTCGTGGTACAGGAGAAAACCTAAATGGCAAAA  300

seq1  AAAAAATTGGAAGGAACATACTGAGGCTGGAGAGATGGCTCAGTGGTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTGGAAGGAACATACTGAGGCTGGAGAGATGGCTCAGTGGTTAA  350

seq1  GGGCACCAGCTGCTCTTGCAGAGGATCTGGGTTCAGTTCCCAAAACCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCAGCTGCTCTTGCAGAGGATCTGGGTTCAGTTCCCAAAACCCAC  400

seq1  ATAGCGGCTCACAACCATCTATAACTCCAGTTCCAGGGGATCCAATGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCGGCTCACAACCATCTATAACTCCAGTTCCAGGGGATCCAATGCCC  450

seq1  TCTACTGGCCACTGTGGGTACTGCACATACATGATGCACATAAACTCACA  500
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TCTACTGGCCACTGTGGGTACTGCACATACATGATGCACTTAAACTCACA  500

seq1  CAGACATATAGATAT  515
      |||||||||||||||
seq2  CAGACATATAGATAT  515