BAC Information

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BAC

Clone NameB6Ng01-295D12
Chromosome11 (Build37)
Map Location 94,599,352 - 94,600,253
singlet/doubletsinglet
Overlap genenone
Upstream geneUtp18, Mbtd1, Nme2, Nme1, Spag9, LOC100039431, LOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g, Spata20, Epn3, Mycbpap, Rsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2, OTTMUSG00000002038
Downstream geneCdc34-ps, A430060F13Rik, Tmem92, LOC100039410, LOC544807, LOC544808, LOC665174, LOC432591, LOC100039739, Col1a1, Sgca, Hils1, Ppp1r9b, Samd14, Pdk2, Itga3, Dlx3, Dlx4, LOC100039437, Tac4, Myst2, 5730593F17Rik, Slc35b1, Spop, LOC100039483, Nxph3, Ngfr, Phb, 1110035M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-295D12.g
ACCGA091143
length1,108
definitionB6Ng01-295D12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaattttccccagcatatgcctcccaaaaactcttctgaaaagt
cttgactctctttgtgtaatttggatttgtgcttttttgttttttaaggc
agcagaagtttcgatattgttttcaagaaaatgactggtgttttccatat
atatatatatatatatatatatatatatatatatatatgacttgtttcaa
cccacaacatggtttctccccccccattaagaagtctgggttagccacca
tccagcccagtgtagcaacaaacctttctcagggagagcttttaagcaca
gaaaccaggttctgggttgatatacatcagttaacaagaacagttagaaa
tatagtacagaagataaagagcaaggttagtcactctgaaacttttccag
aattatatagactttgacgaatcggactcttagttttggcagacagtgtt
gtccacagcctgactgataacttccatcatggagtgagttgtgctaaggt
ctggggacctactaagttctggaggttacagattaaactgtacttcctcc
tagcaacaaaacaaaagagaaacaaaacaaaacaaaagtaaccatggaaa
tataactggagacccaagacctgagagttggcacaggaaagggagaataa
tgtccaccttgctcgaagcaggagagaacgctccatctgtgaccctgctc
tcacacaaggaagacagaaggaaagtgagtctttatctctttttgcaaaa
ccttcatgcaggattcacatgaaaatgtagccaataaacatcttcctaag
cacagctaaaaaagagatcagagacccatgcaggtgttgactgcctgtgg
attcccacacctagctgacctcggggttcacagttcctttttaacagaaa
tcagatggcttatggaagaggccaggtgtctttgtctacagaaactgtgc
agttccctgcaggtaccctttagcttctgcacctgtcgccacctgacctt
ctcttgctcccaactctttacttgtatagaccagccctccttctaggtcc
ccacagttgcccttagcatgctagcatgggcttgcaataagtcattcctg
aaatacca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_94599352_94600253
seq2: B6Ng01-295D12.g_262_1173 (reverse)

seq1  TGGTTTTTCAGG-ATGACTTGTGGC-AGCCC-TGCTGGCATGCT-AGGGC  46
      |||| ||||||| ||||||| | || ||||| |||| ||||||| |||||
seq2  TGGTATTTCAGGAATGACTTATTGCAAGCCCATGCTAGCATGCTAAGGGC  50

seq1  -ACTGTGGGGACCTAGAAGGAGGGCTGGGTCTA-GCAAGTAAAGGAGTTG  94
       ||||||||||||||||||||||||| ||||||  |||||||| ||||||
seq2  AACTGTGGGGACCTAGAAGGAGGGCT-GGTCTATACAAGTAAA-GAGTTG  98

seq1  GGAGCAAGAG-AGGTCAGGTGGCGACAGGTGCAGGAGCT-AAGGGTACCT  142
      |||||||||| ||||||||||||||||||||||| |||| ||||||||||
seq2  GGAGCAAGAGAAGGTCAGGTGGCGACAGGTGCAGAAGCTAAAGGGTACCT  148

seq1  GCAGGGAACTGCACAG-TTCTGTAGAC-AAGACACCTGGCCTCTTCCATA  190
      |||||||||||||||| |||||||||| ||||||||||||||||||||||
seq2  GCAGGGAACTGCACAGTTTCTGTAGACAAAGACACCTGGCCTCTTCCATA  198

seq1  AGCCATCTGATTTCTGTTAAAAAGGAACTGTGAACCCCGAGGTCAGCTAG  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTGATTTCTGTTAAAAAGGAACTGTGAACCCCGAGGTCAGCTAG  248

seq1  GTGTGGGAATCCACAGGCAGTCAACACCTGCATGGGTCTCTGATCTC-TT  289
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTGTGGGAATCCACAGGCAGTCAACACCTGCATGGGTCTCTGATCTCTTT  298

seq1  TTTAGCTGTGCTTAGGAAGATGTTTATTGGCTACA-TTTCATGTGAATCC  338
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTAGCTGTGCTTAGGAAGATGTTTATTGGCTACATTTTCATGTGAATCC  348

seq1  TGCATGAAGGTTTTGCAAAAAGAGATAAAGACCCACTTTCCTGCTGTCTT  388
      |||||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  TGCATGAAGGTTTTGCAAAAAGAGATAAAGACTCACTTTCCTTCTGTCTT  398

seq1  CCTTGTGTGAGAGCAGGGTCACAGATGGAGCGTTCTCTCCTGCTTCGAGC  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGTGAGAGCAGGGTCACAGATGGAGCGTTCTCTCCTGCTTCGAGC  448

seq1  AAGGTGGACATTATTCTCCCTTTCCTGTGCCAACTCTCAGGTCTTGGGTC  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGGACATTATTCTCCCTTTCCTGTGCCAACTCTCAGGTCTTGGGTC  498

seq1  TCCAGTTATATTTCCATGGTTACTTTTGTTTTGTTTTGTTTCTCTTTTGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTATATTTCCATGGTTACTTTTGTTTTGTTTTGTTTCTCTTTTGT  548

seq1  TTTGTTGCTAGGAGGAAGTACAGTTTAATCTGTAACCTCCAGAACTTAGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGCTAGGAGGAAGTACAGTTTAATCTGTAACCTCCAGAACTTAGT  598

seq1  AGGTCCCCAGACCTTAGCACAACTCACTCCATGATGGAAGTTATCAGTCA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCCAGACCTTAGCACAACTCACTCCATGATGGAAGTTATCAGTCA  648

seq1  GGCTGTGGACAACACTGTCTGCCAAAACTAAGAGTCCGATTCGTCAAAGT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTGGACAACACTGTCTGCCAAAACTAAGAGTCCGATTCGTCAAAGT  698

seq1  CTATATAATTCTGGAAAAGTCTCAGAGTGACTAACCTTGCTCTTTATCTT  738
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTATATAATTCTGGAAAAGTTTCAGAGTGACTAACCTTGCTCTTTATCTT  748

seq1  CTGTACTCTATTTCTAACTGTTCTTGTTAACTGATGTATATCAACCCAGA  788
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACTATATTTCTAACTGTTCTTGTTAACTGATGTATATCAACCCAGA  798

seq1  ACCTGGTTTCTGTGCTTAAAAGCTCTCCCTGAGAAAGGTTCGTTGCTACA  838
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCTGGTTTCTGTGCTTAAAAGCTCTCCCTGAGAAAGGTTTGTTGCTACA  848

seq1  CTGGGCTGGCTGGTGGCTAACACAGACTTCCTACTGGGGCTGGAGAAACC  888
      ||||||||| ||||||||||| |||||||| || |||||  |||||||||
seq2  CTGGGCTGGATGGTGGCTAACCCAGACTTCTTAATGGGGGGGGAGAAACC  898

seq1  ATGTTCTGGGTTGA  902
      ||||| ||||||||
seq2  ATGTTGTGGGTTGA  912