BAC Information

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BAC

Clone NameB6Ng01-297P21
Chromosome11 (Build37)
Map Location 40,633,281 - 40,634,356
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039241, LOC382508, LOC432549, Mat2b, Hmmr, Nudcd2, Ccng1
Downstream geneLOC100039256, LOC100039285, Hspd1, LOC100039292
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-297P21.bB6Ng01-297P21.g
ACCGA093215GA093216
length1,0941,160
definitionB6Ng01-297P21.b B6Ng01-297P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttaagaatcatccatcctgaccaagtaggtttcatcccat
ggatgcagggatggttcaatatatggaaatccatcaatgttatccagtat
ataaacaaactcaaagacaaaaaccacatgatcatcttgttagatgcgga
gaaagcatttgacaaaatccaatacccattcatgataaaagtcttggaaa
gataaagaattcaaggccaatacctaaacatgataaaagcagtccacagc
aaaccagtagccaacatcaaagtaaatggtgagaagctggaagcaatccc
actaaaatcagggactagacaaggctgtccactcaacattcaacattgaa
cttgaagtcctagccagagcaattagacaacaaaaggagatcaaggggat
acaaattggaaaggaagaagtcaaaatatcactttttgcagatgatgtga
tagtatatataagtgaccctaaaaattccaccagagaactcctaaacctg
ataaacagcttcaatgaagtattttatcttttatagaaatctacagagaa
tatgtcatctgatttgaatttctagtttgttatacatacatgttatacaa
taacatctcaatatggtccacactgctattatactagtcaaattgacctt
ttcctcttcctcccttccctctcttttccctcttcttcagaaagagattc
agagtgtagccctgaatggccggggactctctatatagaccaggctggat
tgaattcatagagacccacatacttttgcctcctgagtactgggattaaa
gtcatgtgttaccattcctggctgacattcatttcttggcattacctact
tagcatttttagttttcttgattatctgaccattattttttttgcaagag
tacaaatgaccaccccttttattttttattttttctttagattcatttta
tttattttaattgaactaattttttattatattcagcacatatatatttt
atagcatcataaaatgatggacatgttattaatgaacataatagataaag
tcttttggcttcttttgttgcttgctttagtagaagcttaaatc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtgctaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggagagctagagaagtactcagagctaaaggatcttcacctatagtgac
accatatgacctaccagtaaccctgagctctgactctagctgcatatgta
tcaaagattgctagtcgccatcacctgaagagagtccatggaacttgcga
actcgagtgccagttacagaacgctaagtcaaaggagaaatgagtgcgtg
gtcatggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_40633281_40634356
seq2: B6Ng01-297P21.b_74_1142

seq1  CCTGACCAAGTAGGTTTCATCCCATGGATGCAGGGATGGTTCAATATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCAAGTAGGTTTCATCCCATGGATGCAGGGATGGTTCAATATATG  50

seq1  GAAATCCATCAATGTTATCCAGTATATAAACAAACTCAAAGACAAAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCATCAATGTTATCCAGTATATAAACAAACTCAAAGACAAAAACC  100

seq1  ACATGATCATCTTGTTAGATGCGGAGAAAGCATTTGACAAAATCCAATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATCATCTTGTTAGATGCGGAGAAAGCATTTGACAAAATCCAATAC  150

seq1  CCATTCATGATAAAAGTCTTGGAAAGATAAAGAATTCAAGGCCAATACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCATGATAAAAGTCTTGGAAAGATAAAGAATTCAAGGCCAATACCT  200

seq1  AAACATGATAAAAGCAGTCCACAGCAAACCAGTAGCCAACATCAAAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGATAAAAGCAGTCCACAGCAAACCAGTAGCCAACATCAAAGTAA  250

seq1  ATGGTGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAGAAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGC  300

seq1  TGTCCACTCAACATTCAACATTGAACTTGAAGTCCTAGCCAGAGCAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACTCAACATTCAACATTGAACTTGAAGTCCTAGCCAGAGCAATTA  350

seq1  GACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAAGAAGTCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAAGAAGTCAAA  400

seq1  ATATCACTTTTTGCAGATGATGTGATAGTATATATAAGTGACCCTAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACTTTTTGCAGATGATGTGATAGTATATATAAGTGACCCTAAAAA  450

seq1  TTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCAATGAAGTATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCAATGAAGTATTTT  500

seq1  ATCTTTTATAGAAATCTACAGAGAATATGTCATCTGATTTGAATTTCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTATAGAAATCTACAGAGAATATGTCATCTGATTTGAATTTCTAG  550

seq1  TTTGTTATACATACATGTTATACAATAACATCTCAATATGGTCCACACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTATACATACATGTTATACAATAACATCTCAATATGGTCCACACTG  600

seq1  CTATTATACTAGTCAAATTGACCTTTTCCTCTTCCTCCCTTCCCTCTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATACTAGTCAAATTGACCTTTTCCTCTTCCTCCCTTCCCTCTCTT  650

seq1  TTCCCTCTTCTTCAGAAAGAGATTCAGAGTGTAGCCCTGAATGGCCGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTTCTTCAGAAAGAGATTCAGAGTGTAGCCCTGAATGGCCGGGG  700

seq1  ACTCTCTATATAGACCAGGCTGGATTGAATTCATAGAGACCCACATACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTATATAGACCAGGCTGGATTGAATTCATAGAGACCCACATACTT  750

seq1  TTGCCTCCTGAGTACTGGGATTAAAGTCATGTGTTACCATTCCTGGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCCTGAGTACTGGGATTAAAGTCATGTGTTACCATTCCTGGCTGA  800

seq1  CATTCATTTCTTGGCATTACCTACTTAGCATTTTTAGTTTTCTTGATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTTCTTGGCATTACCTACTTAGCATTTTTAGTTTTCTTGATTAT  850

seq1  CTGACCATTATTTTTTTTGCAAGAGTACAAATGACCACCCCTTTTATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATTATTTTTTTTGCAAGAGTACAAATGACCACCCCTTTTATTTT  900

seq1  TTATTTTTTCTTTAGATTCA-TTTATTTATTTTAATTGAACTAATTTTTT  949
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTATTTTTTCTTTAGATTCATTTTATTTATTTTAATTGAACTAATTTTTT  950

seq1  ATTATATTCAGCACAATATATATTTTATAGCAATCATAAAAATGATGGAC  999
      |||||||||||||| |||||||||||||||| ||||| ||||||||||||
seq2  ATTATATTCAGCAC-ATATATATTTTATAGC-ATCAT-AAAATGATGGAC  997

seq1  ATGTTATTAAATGAACATAAATAGATAAAGTCTTTTGGCTTCTTTGTTTG  1049
      |||||||| ||||||||| ||||||||||||||||||||||||||  |||
seq2  ATGTTATT-AATGAACAT-AATAGATAAAGTCTTTTGGCTTCTTTTGTTG  1045

seq1  GTTTGGCTTTAGTAG-AGCTTTAAAATC  1076
       ||  |||||||||| |||||  |||||
seq2  CTT--GCTTTAGTAGAAGCTT--AAATC  1069