BAC Information

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BAC

Clone NameB6Ng01-301G02
Chromosome11 (Build37)
Map Location 121,349,210 - 121,522,931
singlet/doubletdoublet
Overlap geneTbcd, Zfp750, B3gntl1
Upstream geneMrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265, Fn3k
Downstream geneMetrnl, Ptchd3, LOC667879, LOC674842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-301G02.bB6Ng01-301G02.g
ACCGA095706GA095707
length1,0071,084
definitionB6Ng01-301G02.b B6Ng01-301G02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,521,811 - 121,522,931)(121,349,210 - 121,350,296)
sequence
gaattctctgcttttttcccttctttttctcccttcttaagaaacaaaat
ctttaggcatctattctcaagttttcaaatttttccagtgtcaatgtaat
cttgagtctgctactaaaaatcttatttctgtttctatacttggcagctt
taggaattttatttggttctttattctcacgcctgtaattttgtgaatgc
tgtgtagaaaaatatgacactgttgcaggtttatctgtaatcatgacttt
cctcgcatttaatgtatttgtagagattgctctgactctcagttttaaac
ctgatgtctgaccatccttaccggaagtttctgctctctgccctttgccc
tgagtgtagcgagctttcctgtttcttttcatgccttctgttttctgctg
gataaggacagtacagacagcaggtgtctggtctggttgctgctgacact
gtttggtcatgctcctcaggggcaagttacctggggtggcagtagtcatg
gctgcactgtgggttacctagggtggcaatagtcttggttggactgtggg
ttacctggggtggcagtagtcttggctggactgtgggttacctggggtgg
cagtagtcttggctggactgtgggttacctggggtggcagtagtcttgtc
aggactatgggttacctggggtggcagtagtcttgtcaggactgtgggtt
acctagggaggcaatagtcttgtcgggactgtgggttacctagggtggta
atagtcttagctggactgtgggttacctggggtggcagtagtcttggcag
gactgtgggttacctagggaggcaatagtcttgtcgggactgtgggttac
ctagggtggcattagtcttggctagactgtgggttacctggggtggcaat
agtcttggctgcactgtgggtttacctgggggtggcaatagtcttggcag
gactatgggtttacctgggtggcagtagtcctggcaggactgtgggtaac
ctggggg
gaattcaggactttgcacgtggtaggtaatcattaccactaacacataca
tttttttttttttttttaagatgctttaaagctggggatggtatgactga
tgcctgtaattccagcattctgaaggttgaggcaggagcagtgttagaga
tttctggctagcctggccagtagagtgagatcctgtctgaaaaaaataaa
aacaaaaccaaaaattagaaaaagacaaaaccaggcaacattttactact
tatgccctggttgaaaggtcgagctctctctggtgtgactgacctcctca
gggccggggtgctgccttccggctttgctccccagctggctagtgtgctg
cccttgtgctggctgggtctgcttcttcacacttctctgccatgcagtaa
gttgactttgatcttatgattccccagttggaatctgtggccttgcttag
caacacctttgtctctggattcctgcaagagggacctggaacttttgttt
ttcctgtcacctgcccttacccacttattctgccttaccatgatgttgca
cactgtggttggtaatgtatgttttcgtttaccttttcagttaggtggtc
agatagtcttgagtgtaactggccttcctttagaccctcagtatctgtta
ttgtgaataaggccaaggtctggctctgctctgccatccccaagtgactg
gagagttttttgcctttaagtttacttccagcattttcattatgatcatc
ctgttggatctgagcccgtggcgtgtgcttgtctttcgttcttccttagc
ccctagcataggctatgggtatatttcccctctgaaacttgtgcttctcc
acctgagctcctgctatgtctgggcaggtccttgtaccacctttgttata
tgctgtcttgtttccaaaagctagggaggctttttggagttagacttggg
gataatagtggcttctggagttgacagtcatgccagagtttgtatcccag
ttcatgtttattttataatatttttaactagtaactagttataagcagac
tatccaggttgtcacaggaggtgtttcaagtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_121521811_121522931
seq2: B6Ng01-301G02.b_205_1029 (reverse)

seq1  GCCAAGACTACTGCCACCCCAGGTAACCCACAGTCCTGTCAAGACTACTG  50
                                                        
seq2  --------------------------------------------------  0

seq1  CCACCCCAGGTAACCCACAGTCCTGCCAAGACTACTGCCACCCCAGGTAA  100
                                                        
seq2  --------------------------------------------------  0

seq1  CCCACAGTCCAGCCAAGACTATTGCCACCCCAGGTAACCCACAGTCCAGC  150
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGACTATTGCCACCCTAGGTAACCCACAGTCCCGACAAGATTACTGCC  200
                                                        
seq2  --------------------------------------------------  0

seq1  ACCCCAGGTAACCCACAGTCCAGCCAAGACTATTGCCACCCCAGATAACC  250
                                                        
seq2  --------------------------------------------------  0

seq1  CACAGTCCTGCCAAGACTACTGCCCCCCCCCAGGTAACCCACAGTCCTGC  300
                                                      ||
seq2  ------------------------------------------------GC  2

seq1  CAAGACTACTGCCACCCCAGGT-AACCCATAGTCCTGCCAAGACTACTGC  349
      || ||||||||||| ||||||| ||||||||||||||||||||||| |||
seq2  CAGGACTACTGCCA-CCCAGGTAAACCCATAGTCCTGCCAAGACTATTGC  51

seq1  CA-CCCCAGGT-AACCCACAGTGCAGCCAAGACTATTGCCACCCCAGGTA  397
      || |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCAGGTAAACCCACAGTGCAGCCAAGACTATTGCCACCCCAGGTA  101

seq1  ACCCACAGTCTAGCCAAGACTATTGCCACCCTAGGTAACCCACAGTCCCG  447
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACCCACAGTCTAGCCAAGACTAATGCCACCCTAGGTAACCCACAGTCCCG  151

seq1  ACAAGACTATTGCCTCCCTAGGTAACCCACAGTCCTGCCAAGACTACTGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACTATTGCCTCCCTAGGTAACCCACAGTCCTGCCAAGACTACTGC  201

seq1  CACCCCAGGTAACCCACAGTCCAGCTAAGACTATTACCACCCTAGGTAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAGGTAACCCACAGTCCAGCTAAGACTATTACCACCCTAGGTAAC  251

seq1  CCACAGTCCCGACAAGACTATTGCCTCCCTAGGTAACCCACAGTCCTGAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCCCGACAAGACTATTGCCTCCCTAGGTAACCCACAGTCCTGAC  301

seq1  AAGACTACTGCCACCCCAGGTAACCCATAGTCCTGACAAGACTACTGCCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTACTGCCACCCCAGGTAACCCATAGTCCTGACAAGACTACTGCCA  351

seq1  CCCCAGGTAACCCACAGTCCAGCCAAGACTACTGCCACCCCAGGTAACCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGGTAACCCACAGTCCAGCCAAGACTACTGCCACCCCAGGTAACCC  401

seq1  ACAGTCCAGCCAAGACTACTGCCACCCCAGGTAACCCACAGTCCAACCAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCCAGCCAAGACTACTGCCACCCCAGGTAACCCACAGTCCAACCAA  451

seq1  GACTATTGCCACCCTAGGTAACCCACAGTGCAGCCATGACTACTGCCACC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATTGCCACCCTAGGTAACCCACAGTGCAGCCATGACTACTGCCACC  501

seq1  CCAGGTAACTTGCCCCTGAGGAGCATGACCAAACAGTGTCAGCAGCAACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAACTTGCCCCTGAGGAGCATGACCAAACAGTGTCAGCAGCAACC  551

seq1  AGACCAGACACCTGCTGTCTGTACTGTCCTTATCCAGCAGAAAACAGAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGACACCTGCTGTCTGTACTGTCCTTATCCAGCAGAAAACAGAAG  601

seq1  GCATGAAAAGAAACAGGAAAGCTCGCTACACTCAGGGCAAAGGGCAGAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAAAAGAAACAGGAAAGCTCGCTACACTCAGGGCAAAGGGCAGAGA  651

seq1  GCAGAAACTTCCGGTAAGGATGGTCAGACATCAGGTTTAAAACTGAGAGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACTTCCGGTAAGGATGGTCAGACATCAGGTTTAAAACTGAGAGT  701

seq1  CAGAGCAATCTCTACAAATACATTAAATGCGAGGAAAGTCATGATTACAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCAATCTCTACAAATACATTAAATGCGAGGAAAGTCATGATTACAG  751

seq1  ATAAACCTGCAACAGTGTCATATTTTTCTACACAGCATTCACAAAATTAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCTGCAACAGTGTCATATTTTTCTACACAGCATTCACAAAATTAC  801

seq1  AGGCGTGAGAATAAAGAACCAAAT  1121
      ||||||||||||||||||||||||
seq2  AGGCGTGAGAATAAAGAACCAAAT  825

seq1: chr11_121349210_121350296
seq2: B6Ng01-301G02.g_67_1150

seq1  GAATTCAGGACTTTGCACGTGGTAGGTAATCATTACCACTAACACATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACTTTGCACGTGGTAGGTAATCATTACCACTAACACATACA  50

seq1  TTTTTTTTTTTTTTTTTAAGATGCTTTAAAGCTGGGGATGGTATGACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTAAGATGCTTTAAAGCTGGGGATGGTATGACTGA  100

seq1  TGCCTGTAATTCCAGCATTCTGAAGGTTGAGGCAGGAGCAGTGTTAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTAATTCCAGCATTCTGAAGGTTGAGGCAGGAGCAGTGTTAGAGA  150

seq1  TTTCTGGCTAGCCTGGCCAGTAGAGTGAGATCCTGTCTGAAAAAAATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGCTAGCCTGGCCAGTAGAGTGAGATCCTGTCTGAAAAAAATAAA  200

seq1  AACAAAACCAAAAATTAGAAAAAGACAAAACCAGGCAACATTTTACTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCAAAAATTAGAAAAAGACAAAACCAGGCAACATTTTACTACT  250

seq1  TATGCCCTGGTTGAAAGGTCGAGCTCTCTCTGGTGTGACTGACCTCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCTGGTTGAAAGGTCGAGCTCTCTCTGGTGTGACTGACCTCCTCA  300

seq1  GGGCCGGGGTGCTGCCTTCCGGCTTTGCTCCCCAGCTGGCTAGTGTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCGGGGTGCTGCCTTCCGGCTTTGCTCCCCAGCTGGCTAGTGTGCTG  350

seq1  CCCTTGTGCTGGCTGGGTCTGCTTCTTCACACTTCTCTGCCATGCAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTGCTGGCTGGGTCTGCTTCTTCACACTTCTCTGCCATGCAGTAA  400

seq1  GTTGACTTTGATCTTATGATTCCCCAGTTGGAATCTGTGGCCTTGCTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTTTGATCTTATGATTCCCCAGTTGGAATCTGTGGCCTTGCTTAG  450

seq1  CAACACCTTTGTCTCTGGATTCCTGCAAGAGGGACCTGGAACTTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCTTTGTCTCTGGATTCCTGCAAGAGGGACCTGGAACTTTTGTTT  500

seq1  TTCCTGTCACCTGCCCTTACCCACTTATTCTGCCTTACCATGATGTTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCACCTGCCCTTACCCACTTATTCTGCCTTACCATGATGTTGCA  550

seq1  CACTGTGGTTGGTAATGTATGTTTTCGTTTACCTTTTCAGTTAGGTGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGGTTGGTAATGTATGTTTTCGTTTACCTTTTCAGTTAGGTGGTC  600

seq1  AGATAGTCTTGAGTGTAACTGGCCTTCCTTTAGACCCTCAGTATCTGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTCTTGAGTGTAACTGGCCTTCCTTTAGACCCTCAGTATCTGTTA  650

seq1  TTGTGAATAAGGCCAAGGTCTGGCTCTGCTCTGCCATCCCCAAGTGACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAATAAGGCCAAGGTCTGGCTCTGCTCTGCCATCCCCAAGTGACTG  700

seq1  GAGAGTTTTTTGCCTTTAAGTTTACTTCCAGCATTTTCATTATGATCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTTTTGCCTTTAAGTTTACTTCCAGCATTTTCATTATGATCATC  750

seq1  CTGTTGGATCTGAG-CCGTGGCGTGTGCTTGTCTTTCGTTCTTCCTTAGC  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTGTTGGATCTGAGCCCGTGGCGTGTGCTTGTCTTTCGTTCTTCCTTAGC  800

seq1  CCCTAGCATAGGCTATGGGTATATTTCCCCTCTGAAACTTGTGCTTCTCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGCATAGGCTATGGGTATATTTCCCCTCTGAAACTTGTGCTTCTCC  850

seq1  ACCTGAGCTCCTGCTATGTCTGGGCAGGTCCTTGTA-CACCTTTGTTATA  898
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACCTGAGCTCCTGCTATGTCTGGGCAGGTCCTTGTACCACCTTTGTTATA  900

seq1  TGCTGTC-TGTTTCCAAAAGCTAGGGAGGCTTTTTGGAGTTAGACTTGGG  947
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTTGTTTCCAAAAGCTAGGGAGGCTTTTTGGAGTTAGACTTGGG  950

seq1  GATAATAGTGGCTTCTGGAGGTGACAGTCATGCCAGGAGTTGGTATCCCA  997
      |||||||||||||||||||| |||||||||||||| ||||| ||||||||
seq2  GATAATAGTGGCTTCTGGAGTTGACAGTCATGCCA-GAGTTTGTATCCCA  999

seq1  GTTCAATGTTTTATTTTATAATATTTTTAACCTTAGTAAACTAGTTTAAT  1047
      |||| ||| ||||||||||||||||||||||  |||| ||||||||  ||
seq2  GTTC-ATG-TTTATTTTATAATATTTTTAAC--TAGT-AACTAGTT--AT  1042

seq1  TAGCAGACTATACAAGTTGTCACAG--AGTGTTCCAAGTAGA  1087
       |||||||||| || ||||||||||   ||||| ||||||||
seq2  AAGCAGACTATCCAGGTTGTCACAGGAGGTGTTTCAAGTAGA  1084