BAC Information

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BAC

Clone NameB6Ng01-303N24
Chromosome11 (Build37)
Map Location 10,578,859 - 10,732,429
singlet/doubletdoublet
Overlap genenone
Upstream geneAbca13, LOC665435, LOC382483
Downstream geneVwc2, Zpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-303N24.bB6Ng01-303N24.g
ACCGA097568GA097569
length1,0561,093
definitionB6Ng01-303N24.b B6Ng01-303N24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,578,859 - 10,579,445)(10,731,328 - 10,732,429)
sequence
gaattcagcagcattctttttattcagtattattttatctgtctgctata
ttttgtgatcccatatgaaattgaaattagtttattacatctctaagata
taattttggaattgttactggcattgtattgaacctgtggattgattttg
ttaagatgtctattttcacgatatgaattcttctgaaaattggacacggg
aatcttttcatcttcttgtgtattcctcaattcctttctttagtatctct
ttttattgttcatttttttatcttcccttggttaaatttactactaggta
ttttattatttttatggtggccatagtgaatgggattgtttccatctctt
tctcagtatatttgacaggtttttaatagaaagactatggcttgtttttc
ctgttaattttgtatcatgaaaatttgctgatagtgttttttaccagctc
tacaaatttccccatagagttttaaagtttttttttttatagaattgtac
atagaacaatattatcagcaaatggaggagcattgtcttttccttttcct
ctttgcaatccttatacttttgactttgctctaagatttcaataattgtg
ttcaccagcagtagagagagtagacaatattctctgccacttattgtagt
agaaaagctttgagttgtttgtttttgtttgtttgtttagggtgatgcta
gttctaggtttgttgtatatagcctctcttatcttatgttaatatgtttt
atatatatatatatatatatatatatatatatatatatatatccctccct
ctctctcctttccagaagtttttatcatgaaaggatgatgaagttgtcaa
aagccctgtctgtatctattgaagtgaccatgtagtttatgtctctgagt
taatttgatggggtagaaatggttttctaatttcagcttttctgacacgc
acatggaagttccacattttttgaaatagaaagatagtatggttgtgtgg
atataggtaccatatcaactacactgcttcagtggtccttgactttctag
aaattt

gaattcatactaatatcatagaaacacagcacaattagtggtatgacatc
tggttatgcaaactgaacagctttctatcaattcagagttgatttttaag
atagcattaactactttatctaactgtttggtatacatgctgttaacttc
tgcctaattaggatgggtttggtttaggctgaaaagcacataacccccaa
atcatatggggctggcaagtaaaagtatatttcttctcttgaattttgaa
gacatggctagttgtagccttatagttactttagagaccaaggctagcag
aggatttattatttatagggcaatttgctctagtatatgagattcctgac
ctataataccttgtaaaatgcagttcacatatgacattcaatttagactt
tgtttttacttgcaaaaacttttcgatgagttgtatgaatcagttacctt
accatgcatttcatatatatttcatcttgtttccaaaaacacaattttat
atattattatttcattttttacaaaaaagtatactatattttcgtttttc
aaaaaatgggtgtaatgtcttcttgatgggttgaccatttttttatcatg
atttaatactcttttttatttccttcatcaagttttgacatagttttatt
acttggttatggatgttagtggagttagcttggctctttctgtcctactg
tcctcatggaataatctttgttttcactcttaactgatttaatagtctaa
agttttctgcaggtgctatgtggtgtggtggttgaatactttgtaaaatt
ccttctactcatttctacttttaaagtgggcattttcttatactggatgc
tgttattgaccattggacaaactgtttccaattttgctcatttgtttcct
atgcaatttattttctttgttcctcaattacttagcattgtcttcttttg
gtttctaatgttaaatttctggtgtgcattttatttccttccatttgttt
aaattatactattacatattagctgcatgatctgttcaataacatatttt
ggtttacttctacaaccagatctggctctttccttcttctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_10578859_10579445
seq2: B6Ng01-303N24.b_514_1102

seq1  AGTTTTAAAGTTTTTTTTTTTATAGAATTGTACATAGAACAATATTATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAAGTTTTTTTTTTTATAGAATTGTACATAGAACAATATTATCA  50

seq1  GCAAATGGAGGAGCATTGTCTTTTCCTTTTCCTCTTTGCAATCCTTATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGGAGGAGCATTGTCTTTTCCTTTTCCTCTTTGCAATCCTTATAC  100

seq1  TTTTGACTTTGCTCTAAGATTTCAATAATTGTGTTCACCAGCAGTAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACTTTGCTCTAAGATTTCAATAATTGTGTTCACCAGCAGTAGAGA  150

seq1  GAGTAGACAATATTCTCTGCCACTTATTGTAGTAGAAAAGCTTTGAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGACAATATTCTCTGCCACTTATTGTAGTAGAAAAGCTTTGAGTTG  200

seq1  TTTGTTTTTGTTTGTTTGTTTAGGGTGATGCTAGTTCTAGGTTTGTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTTGTTTGTTTGTTTAGGGTGATGCTAGTTCTAGGTTTGTTGTA  250

seq1  TATAGCCTCTCTTATCTTATGTTAATATGTTTTATATATATATATATATA  300
      ||||||||||||||||||||||||||||||||    ||||||||||||||
seq2  TATAGCCTCTCTTATCTTATGTTAATATGTTT----TATATATATATATA  296

seq1  TATATATATATATATATATATATATATATCCCTCCCTCTCTCTCCTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATATATCCCTCCCTCTCTCTCCTTTCC  346

seq1  AGAAG-TTTTATCATGAAAGGATGATGAAGTTTGTCAAAAGCCCTGTCTG  399
      ||||| |||||||||||||||||||||||| |||||||||||||||||||
seq2  AGAAGTTTTTATCATGAAAGGATGATGAAG-TTGTCAAAAGCCCTGTCTG  395

seq1  TATCTATTGAAGTGACCATGTAGTTTATGTCTCTGAGTTAATTT-AT-GG  447
      |||||||||||||||||||||||||||||||||||||||||||| || ||
seq2  TATCTATTGAAGTGACCATGTAGTTTATGTCTCTGAGTTAATTTGATGGG  445

seq1  GTAGAAAATGTTT--TTATTTAAG--TTTATGAAAAGCAAAATGGAGTTC  493
      |||||||  ||||  | |||| ||  ||| ||| | ||| |  | |||||
seq2  GTAGAAATGGTTTTCTAATTTCAGCTTTTCTGACACGCACATGGAAGTTC  495

seq1  CACA-TTTTTGAAATAGAAA-ATAGTATGGTTTTGTGGGATATAAGGTCC  541
      |||| ||||||||||||||| ||||||||||| ||| ||||||| |  ||
seq2  CACATTTTTTGAAATAGAAAGATAGTATGGTTGTGT-GGATATAGGTACC  544

seq1  CTATCAATTCCA-TGCCTTTCAGTGGT-CTTGAGCTTTCTAGAAATTT  587
       |||||| | || |||  ||||||||| ||||| ||||||||||||||
seq2  ATATCAACTACACTGC--TTCAGTGGTCCTTGA-CTTTCTAGAAATTT  589


seq1: chr11_10731328_10732429
seq2: B6Ng01-303N24.g_68_1160 (reverse)

seq1  TAGAGAAGAAGAAAAGGAGCAGAATCT-GATGTAGAAGTAAACAAAAATT  49
      ||||||||||| ||| ||||   |||| | ||||||||||||| ||||| 
seq2  TAGAGAAGAAGGAAA-GAGCCAGATCTGGTTGTAGAAGTAAACCAAAAT-  48

seq1  AATGTTAATTGAAACAAGATCATGCAAACCTAATATGTAAATAGTATAAT  99
       ||||| ||||||   |||||||||  | ||||||||| |||||||||||
seq2  -ATGTT-ATTGAA--CAGATCATGC--AGCTAATATGT-AATAGTATAAT  91

seq1  TTAAAACAAATTGGGAAGGAAATAAAATGCACACCAGAAATTTAACATTA  149
      || ||||||||  |||||||||||||||||||||||||||||||||||||
seq2  TT-AAACAAAT--GGAAGGAAATAAAATGCACACCAGAAATTTAACATTA  138

seq1  GAAA-CAAAAGAAGACAATGCTAAAGTAATTGAGGAACAAAGAAAATAAA  198
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAAACCAAAAGAAGACAATGCT-AAGTAATTGAGGAACAAAGAAAATAAA  187

seq1  TTGCATAGGAAACAAATGAGCAAAATTGG-AACAGTTTGT-CAATGGTCA  246
      ||||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  TTGCATAGGAAACAAATGAGCAAAATTGGAAACAGTTTGTCCAATGGTCA  237

seq1  ATAACAGCATCCAGTATAAGAAAATGCCCACTTTAAAAGTAGAAATGAGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGCATCCAGTATAAGAAAATGCCCACTTTAAAAGTAGAAATGAGT  287

seq1  AGAAGGAATTTTACAAAGTATTCAACCACCACACCACATAGCACCTGCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAATTTTACAAAGTATTCAACCACCACACCACATAGCACCTGCAG  337

seq1  AAAACTTTAGACTATTAAATCAGTTAAGAGTGAAAACAAAGATTATTCCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTAGACTATTAAATCAGTTAAGAGTGAAAACAAAGATTATTCCA  387

seq1  TGAGGACAGTAGGACAGAAAGAGCCAAGCTAACTCCACTAACATCCATAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACAGTAGGACAGAAAGAGCCAAGCTAACTCCACTAACATCCATAA  437

seq1  CCAAGTAATAAAACTATGTCAAAACTTGATGAAGGAAATAAAAAAGAGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAATAAAACTATGTCAAAACTTGATGAAGGAAATAAAAAAGAGTA  487

seq1  TTAAATCATGATAAAAAAATGGTCAACCCATCAAGAAGACATTACACCCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCATGATAAAAAAATGGTCAACCCATCAAGAAGACATTACACCCA  537

seq1  TTTTTTGAAAAACGAAAATATAGTATACTTTTTTGTAAAAAATGAAATAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAAAAACGAAAATATAGTATACTTTTTTGTAAAAAATGAAATAA  587

seq1  TAATATATAAAATTGTGTTTTTGGAAACAAGATGAAATATATATGAAATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATAAAATTGTGTTTTTGGAAACAAGATGAAATATATATGAAATG  637

seq1  CATGGTAAGGTAACTGATTCATACAACTCATCGAAAAGTTTTTGCAAGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAAGGTAACTGATTCATACAACTCATCGAAAAGTTTTTGCAAGTA  687

seq1  AAAACAAAGTCTAAATTGAATGTCATATGTGAACTGCATTTTACAAGGTA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAGTCTAAATTGAATGTCATATGTGAACTGCATTTTACAAGGTA  737

seq1  TTATAGGTCAGGAATCTCATATACTAGAGCAAATTGCCCTATAAATAATA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGTCAGGAATCTCATATACTAGAGCAAATTGCCCTATAAATAATA  787

seq1  AATCCTCTGCTAGCCTTGGTCTCTAAAGTAACTATAAGGCTACAACTAGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTGCTAGCCTTGGTCTCTAAAGTAACTATAAGGCTACAACTAGC  837

seq1  CATGTCTTCAAAATTCAAGAGAAGAAATATACTTTTACTTGCCAGCCCCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTTCAAAATTCAAGAGAAGAAATATACTTTTACTTGCCAGCCCCA  887

seq1  TATGATTTGGGGGTTATGTGCTTTTCAGCCTAAACCAAACCCATCCTAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTGGGGGTTATGTGCTTTTCAGCCTAAACCAAACCCATCCTAAT  937

seq1  TAGGCAGAAGTTAACAGCATGTATACCAAACAGTTAGATAAAGTAGTTAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGAAGTTAACAGCATGTATACCAAACAGTTAGATAAAGTAGTTAA  987

seq1  TGCTATCTTAAAAATCAACTCTGAATTGATAGAAAGCTGTTCAGTTTGCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCTTAAAAATCAACTCTGAATTGATAGAAAGCTGTTCAGTTTGCA  1037

seq1  TAACCAGATGTCATACCACTAATTGTGCTGTGTTTCTATGATATTAGTAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAGATGTCATACCACTAATTGTGCTGTGTTTCTATGATATTAGTAT  1087

seq1  GAATTC  1102
      ||||||
seq2  GAATTC  1093


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