BAC Information

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BAC

Clone NameB6Ng01-304B16
Chromosome11 (Build37)
Map Location 120,253,454 - 120,383,647
singlet/doubletdoublet
Overlap geneNploc4, Tspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10
Upstream geneLOC672511, Rnf213, A730011L01Rik, Nptx1, 4932417H02Rik, Chmp6, Baiap2, Aatk, Azi1, 2410002I01Rik, 1810043H04Rik, 1810073N04Rik, 2810410L24Rik, LOC100042332, LOC100043384, LOC100043389, Bahcc1, Actg1, Fscn2, 2310003H01Rik
Downstream geneLOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265, Fn3k, Tbcd, Zfp750
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304B16.bB6Ng01-304B16.g
ACCGA097741GA097742
length1,1851,007
definitionB6Ng01-304B16.b B6Ng01-304B16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,253,454 - 120,254,610)(120,382,650 - 120,383,647)
sequence
gaattcatcttcaaatctaattaagctctaatatgcaaaaacatttttcc
agcacctgttcactttaatcttcccctccagggaattttcttgttaaaaa
cccccaccctttctttgtgctattctcgttcaaacttaactacccaactg
taccttttctgctcaccacaaaaataaaggtgttgtagctcccatttttc
cctaggggaaaacagggtaacttgtatctgcacaccccgcccccacgcct
tcactcgccagccaatccctagtcccaaacacaattttaaaggcaattac
tttttatgggccttagcaaatgtcaggcagaacacactggaaggtagaca
tcttcattctaaatttgacagctgccatagtgccagcagtttacctatcc
acacctgagcgagacaagggagaatgagaagtcatggtcccccacacctc
actgcctactgcagtccacatctgcaagcactggtgtcatggtgccatag
aaacatagataccgatgtccttgttatcctggccaacacaggtttggctt
ggtgagtgactcactgaccagctggtatccccctgcgttagatagatgga
tgaacccttagcctgctgctgctgctccattaacaactggtaggacaggt
aactagcagcaggatctgagaggcactcagagcacaagagcagtgggccc
gggagctccactcacagcacacctgcaggacgcctgccagagacagacag
aagcagcacatggtgcttctcaggcacctgccaggttagatagattctgc
atgtcctggtctcgctgcccctcccactcccactacacgtgtcacaggca
ctatccttgccccagtgcatgagaaatgataggctgctgtgactgactag
cccagtaagtagcagatagtaagagccagtgttatattaacagtggagga
aagttttggagaatacaggacttcatttaacctggaaaattttcatcttc
aagatttaaagtagtagtgtgcattgaggacctagttatttagaggattg
cctcatggtggggttcccacttgtgaagtataccagccacccaaccttta
gatggagcctcatggcttgtcaggcaggttttcctctctttctctccctt
gtgaaagggatgaatgccagtcagtcactcatcag
gaattcagtaagatccacctgcctgtgcctcctcagtgctgggattaaat
gaatgaatcactatgcccagctggttttgtttgctttttcaaatgttatt
agattattattattactattactgtgaatgtgtggccacaatgccatggc
atgcatgctgggacagctttgtgaagttggttctttcgttccatctttat
atgggttctgggttggtctcagggcctcaggcttagtggcaggcactttg
agtctctgagccctctctcccatccacctatctctctgagagtgtttcca
gccagccataaccagttttctgggggtctttctttttcttttttcacttc
tttctttcttccttccttcctttctttctttctttcttttcttctttttt
cttttctttttttttttttttttctcttttgttgtacagatgttgctttt
ttctagacagggtttctctgtgtagccctgactgtcctggaactcactct
gtagaccaggctggcctcaaacacagagatcttcctacctctgcctcctg
agttctggaattaaagatgtgtgccaccattgcctgatttagttttttaa
atatgagagagtgtgtctgtgtttgtgtgagtacgtgcagatgtgctggt
gccctctgaggccagaagagggcgtcagatcccctgcagctggtggttgt
gagccatctgatgctggtcttgagaactgaacctggatctttctacaaga
acagcaaggttgtgccaaaactccttttttctcaacactgggtagtctta
ctggggtgggtggaagcctgctttgtccctaccacaggcctggagggagg
tctctttgccccacagcagggttgaatccaggcctctgaacaacctccct
ggcccctccagtaggcctcttctctggccagaacccagccctattagccg
aagacagaatttagagtcttcttgggaaaaatgttcctccaagatggcct
tcactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_120253454_120254610
seq2: B6Ng01-304B16.b_49_1233

seq1  GAATTCATCTTCAAATCTAATTAAGCTCTAATATGCAGAAACATTTTTCC  50
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATTCATCTTCAAATCTAATTAAGCTCTAATATGCAAAAACATTTTTCC  50

seq1  AGCACCTGTTCACTTTAATCTTCCCCTCCAGGGAATTTTCTTGTTAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTGTTCACTTTAATCTTCCCCTCCAGGGAATTTTCTTGTTAAAAA  100

seq1  CCCCCACCCTTTCTTTGTGCTATTCTCGTTCAAACTTAACTACCCAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCTTTCTTTGTGCTATTCTCGTTCAAACTTAACTACCCAACTG  150

seq1  TACCTTTTCTGCTCACCACAAAAATAAAGGTGTTGTAGCTCCCATTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTCTGCTCACCACAAAAATAAAGGTGTTGTAGCTCCCATTTTTC  200

seq1  CCTAGGGGAAAACAGGGTAACTTGTATCTGCACACCCCGCCCCCACGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGGGGAAAACAGGGTAACTTGTATCTGCACACCCCGCCCCCACGCCT  250

seq1  TCACTCGCCAGCCAATCCCTAGTCCCAAACACAATTTTAAAGGCAATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCGCCAGCCAATCCCTAGTCCCAAACACAATTTTAAAGGCAATTAC  300

seq1  TTTTTATGGGCCTTAGCAAATGTCAGGCAGAACACACTGGAAGGTAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGGGCCTTAGCAAATGTCAGGCAGAACACACTGGAAGGTAGACA  350

seq1  TCTTCATTCTAAATTTGACAGCTGCCATAGTGCCAGCAGTTTACCTATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTCTAAATTTGACAGCTGCCATAGTGCCAGCAGTTTACCTATCC  400

seq1  ACACCTGAGCGAGACAAGGGAGAATGAGAAGTCATGGTCCCCCACACCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGAGCGAGACAAGGGAGAATGAGAAGTCATGGTCCCCCACACCTC  450

seq1  ACTGCCTACTGCAGTCCACATCTGCAAGCACTGGTGTCATGGTGCCATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTACTGCAGTCCACATCTGCAAGCACTGGTGTCATGGTGCCATAG  500

seq1  AAACATAGATACCGATGTCCTTGTTATCCTGGCCAACACAGGTTTGGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGATACCGATGTCCTTGTTATCCTGGCCAACACAGGTTTGGCTT  550

seq1  GGTGAGTGACTCACTGACCAGCTGGTATCCCCCTGCGTTAGATAGATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTGACTCACTGACCAGCTGGTATCCCCCTGCGTTAGATAGATGGA  600

seq1  TGAACCCTTAGCCTGCTGCTGCTGCTCCATTAACAACTGGTAGGACAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCTTAGCCTGCTGCTGCTGCTCCATTAACAACTGGTAGGACAGGT  650

seq1  AACTAGCAGCAGGATCTGAGAGGCACTCAGAGCACAAGAGCAGTGGGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCAGCAGGATCTGAGAGGCACTCAGAGCACAAGAGCAGTGGGCCC  700

seq1  GGGAGCTCCACTCACAGCACACCTGCAGGACGCCTGCCAGAGACAGACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTCCACTCACAGCACACCTGCAGGACGCCTGCCAGAGACAGACAG  750

seq1  AAGCAGCACATGGTGCTTCTCAGGCACCTGCCAGGTTAGATAGATTCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCACATGGTGCTTCTCAGGCACCTGCCAGGTTAGATAGATTCTGC  800

seq1  ATGTCCTGGTCTCGCTGCCCCTCCCACTCCCAACTACACGTGTCACAGGC  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGTCCTGGTCTCGCTGCCCCTCCCACTCCC-ACTACACGTGTCACAGGC  849

seq1  ACTATCCTTGCCCCAGTGCATGAGAAATGATAGGCTGCTGTGACTGACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCCTTGCCCCAGTGCATGAGAAATGATAGGCTGCTGTGACTGACTA  899

seq1  GCCCAGTAAGTAGCAGATAGT-AGAGCCAGTG-TATA-TAACAGT-GAGG  946
      ||||||||||||||||||||| |||||||||| |||| ||||||| ||||
seq2  GCCCAGTAAGTAGCAGATAGTAAGAGCCAGTGTTATATTAACAGTGGAGG  949

seq1  AAAGTTTTGGAGAATACAGGAC-TCATTTAA-CTG--AAAATTTCATC-T  991
      |||||||||||||||||||||| |||||||| |||  ||| ||||||| |
seq2  AAAGTTTTGGAGAATACAGGACTTCATTTAACCTGGAAAATTTTCATCTT  999

seq1  CAAGATTT-AAGTAGTAGTGTGCA-TGAGGAACTAGTTA-TAAGAGGATT  1038
      |||||||| ||||||||||||||| |||||| ||||||| | ||||||||
seq2  CAAGATTTAAAGTAGTAGTGTGCATTGAGGACCTAGTTATTTAGAGGATT  1049

seq1  G-CTCAT-GTGGG--TTCCAC-TGTGGAGTATA-CAG-CACCCAACCTTA  1081
      | ||||| |||||  | |||| |||| |||||| ||| ||||||||||| 
seq2  GCCTCATGGTGGGGTTCCCACTTGTGAAGTATACCAGCCACCCAACCTTT  1099

seq1  GAATGGAG-CTCATGG-TTGTCA-GCAG--TGTTCTCTCT---TCTCCC-  1122
        |||||| ||||||| |||||| ||||  | | ||||||   |||||| 
seq2  AGATGGAGCCTCATGGCTTGTCAGGCAGGTTTTCCTCTCTTTCTCTCCCT  1149

seq1  TGTG-AAGGAATG-ATG-CAGCCCAAGTCACTCATCAG  1157
      |||| |||| ||| ||| ||| |  |||||||||||||
seq2  TGTGAAAGGGATGAATGCCAGTC--AGTCACTCATCAG  1185

seq1: chr11_120382650_120383647
seq2: B6Ng01-304B16.g_69_1075 (reverse)

seq1  CCAGCTGAAGGGCCATCTGGGAGG-ACATTTTCCCCAAGGAGACTCTAAA  49
      |||| |||| |||||||| ||||| ||||||| |||||| ||||||||||
seq2  CCAG-TGAA-GGCCATCTTGGAGGAACATTTTTCCCAAGAAGACTCTAAA  48

seq1  -TCTGTCTCTGGCTAATAGGGCT-GGCTCTGGCCAGAGAAGAGGCCTACT  97
       |||||||  ||||||||||||| || |||||||||||||||||||||||
seq2  TTCTGTCTTCGGCTAATAGGGCTGGGTTCTGGCCAGAGAAGAGGCCTACT  98

seq1  GGAGGGGCCAGGGAGGTTG-TCAGAGGCCTGGATTCAA-CCTGCTGTGGG  145
      ||||||||||||||||||| |||||||||||||||||| |||||||||||
seq2  GGAGGGGCCAGGGAGGTTGTTCAGAGGCCTGGATTCAACCCTGCTGTGGG  148

seq1  GC-AAGAGACCTCCCTCCAGGCCTGTGGTA-GGAC-AAGCAGGCTTCCAC  192
      || ||||||||||||||||||||||||||| |||| ||||||||||||||
seq2  GCAAAGAGACCTCCCTCCAGGCCTGTGGTAGGGACAAAGCAGGCTTCCAC  198

seq1  C--ACCCAGTAAGACTACCCAGTGTTGAGAAAAAAGGAGTTTTGGCACAA  240
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCAGTAAGACTACCCAGTGTTGAGAAAAAAGGAGTTTTGGCACAA  248

seq1  CCTTGCTGTTCTTGTAG-AAGATCCAGGTTCAGTTCTCAAGACCAGCATC  289
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CCTTGCTGTTCTTGTAGAAAGATCCAGGTTCAGTTCTCAAGACCAGCATC  298

seq1  AGATGGCTCACAACCACCAGCTGCAGGGGATCTGACGCCCTCTTCTGGCC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCACAACCACCAGCTGCAGGGGATCTGACGCCCTCTTCTGGCC  348

seq1  TCAGAGGGCACCAGCACATCTGCACGTACTCACACAAACACAGACACACT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGGCACCAGCACATCTGCACGTACTCACACAAACACAGACACACT  398

seq1  CTCTCATATTTAAAAAACTAAATCAGGCAATGGTGGCACACATCTTTAAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATATTTAAAAAACTAAATCAGGCAATGGTGGCACACATCTTTAAT  448

seq1  TCCAGAACTCAGGAGGCAGAGGTAGGAAGATCTCTGTGTTTGAGGCCAGC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAACTCAGGAGGCAGAGGTAGGAAGATCTCTGTGTTTGAGGCCAGC  498

seq1  CTGGTCTACAGAGTGAGTTCCAGGACAGTCAGGGCTACACAGAGAAACCC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTACAGAGTGAGTTCCAGGACAGTCAGGGCTACACAGAGAAACCC  548

seq1  TGTCTAGAAAAAAGCAACATCTGTACAACAAAAGAGAAAAAAAAAAAAAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGAAAAAAGCAACATCTGTACAACAAAAGAGAAAAAAAAAAAAAA  598

seq1  AAAGAAAAGAAAAAAGAAGAAAAGAAAGAAAGAAAGAAAGGAAGGAAGGA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAGAAAAAAGAAGAAAAGAAAGAAAGAAAGAAAGGAAGGAAGGA  648

seq1  AGAAAGAAAGAAGTGAAAAAAGAAAAAGAAAGACCCCCAGAAAACTGGTT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAGTGAAAAAAGAAAAAGAAAGACCCCCAGAAAACTGGTT  698

seq1  ATGGCTGGCTGGAAACACTCTCAGAGAGATAGGTGGATGGGAGAGAGGGC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGGCTGGAAACACTCTCAGAGAGATAGGTGGATGGGAGAGAGGGC  748

seq1  TCAGAGACTCAAAGTGCCTGCCACTAAGCCTGAGGCCCTGAGACCAACCC  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGACTCAAAGTGCCTGCCACTAAGCCTGAGGCCCTGAGACCAACCC  798

seq1  AGAACCCATATAAAGATGGAACGAAAGAACCAACTTCACAAAGCTGTCCC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCATATAAAGATGGAACGAAAGAACCAACTTCACAAAGCTGTCCC  848

seq1  AGCATGCATGCCATGGCATTGTGGCCACACATTCACAGTAATAGTAATAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGCATGCCATGGCATTGTGGCCACACATTCACAGTAATAGTAATAA  898

seq1  TAATAATCTAATAACATTTGAAAAAGCAAACAAAACCAGCTGGGCATAGT  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATCTAATAACATTTGAAAAAGCAAACAAAACCAGCTGGGCATAGT  948

seq1  GATTCATTCATTTAATCCCAGCACTGAGGAGGCACAGGCAGGTGGATCTT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATTCATTTAATCCCAGCACTGAGGAGGCACAGGCAGGTGGATCTT  998

seq1  ACTGAATTC  998
      |||||||||
seq2  ACTGAATTC  1007