BAC Information

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BAC

Clone NameB6Ng01-304H05
Chromosome11 (Build37)
Map Location 74,415,870 - 74,541,440
singlet/doubletdoublet
Overlap geneE130309D14Rik, 1300001I01Rik, Pafah1b1
Upstream geneOlfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4
Downstream geneMett10d, Mnt, Rutbc1, Tsr1, Srr, LOC100042478, Smg6, LOC100043429, LOC627835, Hic1, LOC668604, Ovca2, Dph1, Rtn4rl1, Rpa1, Smyd4, Serpinf1, LOC100043447, Serpinf2, Wdr81, LOC100042498, 2010305C02Rik, Prpf8, Rilp, Scarf1, Slc43a2, Pitpna, LOC654359, Pps, Myo1c, Crk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-304H05.bB6Ng01-304H05.g
ACCGA098004GA098005
length1,1901,087
definitionB6Ng01-304H05.b B6Ng01-304H05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,540,251 - 74,541,440)(74,415,870 - 74,416,953)
sequence
gaattcagttttctcatcttatcagtggatctggatgatggaactcgtgt
tgtctcatcaaatgcttctacctgctcacccattccccccccccccccat
aggttttttttcctatgtatatttcatgtctatttaaaggttttggatta
taaaggttccctctggctcctccttgttctactaagctgagagtttgact
ctgtggattccctttcatttgcttttatgtgctcgcaatttcatgacaca
tccggatgtcacgatgctgagaagaatgactggtctagttggatctgccc
acactgacatatctatgccttgtggaatttcaagtacccaagttaatgag
tgaaactctcctagagtcagtgcctggtcagttgggtcatggttctcttc
tggatggactttaacttatataacttgcattcccccaagcttccttctta
ccatttgttagtttatttctctattattttcacacatgacattggacatt
ttcctgtaaactacagaggccagttgaactttcaaaaaaattgttttttg
gttttttttttttttgatgagtgatttttcttttgtgtgtttatgttcat
atgtgggaatttgcttgcacatgtgtgtggtggttgacacccacgacttt
taccagcatgctgggcatcaaactcaggtcctgatgtttgaggagcaagc
actttacctacagagcaatctctctagctccttagaacaaagttttaaca
tttttcctttggccatacttatagaagacattttgttctctccccagtag
caatatttttggactgtttcttccagtcagcttatttgcagaattgtttt
aagtaacactaattttgctgcagcaattgaaacaaatgtttccattttga
aaatgtctactgggaaaaataaagatttgtatttcaaatgaatggaggga
ttgttagattgttcttaggaaaaaaaatggaaatgtttatttttccacaa
gaaatataaaacactaactcaagacatccatttagtaaatttctctgagg
aagactaagttctacagaaggactatgaactatgattgatggcacagatg
tctaattctcattccattagaacaagtaattgttcaagtgattacagtgt
tagcactaactgaaagcgcatagaacctgtgttaacacac
gaattcaatttactaacttaggaaatgtgttttaccaaactggatctcat
ggaatgtaaggaaaaaaatggaccatcggcaaatatcttcctgaccaccc
tgctgtgtgtctgaaattccactgaacagtccttgcatggaaattagcta
ctgccctactgcccagggttttgttttactgttggtttggttttggtttg
gtttggctgtgtcttagttagggttttactgctgtgagcagataccatga
catttaatttgggctggcttacaggttcagaggttcaacccattatcatc
aaggcaggagcatgacagcatctaggcaggcatggtgcaggcagagctga
gagttctacatcttcatctgaaggctgctagaaaactgacttccaggcag
ctaggatgagggtcttaagcccatgctcacagtgacacacccactccaac
aaggccatacctcctactagcgccacgccctgagccaagcatatataaac
catcacagggtgtctgtctgtctgtctgtctgtctctctggctctctggc
tctgtctgtgtgtgtgagagagagacagagaaagagactagagattaaaa
tcagactttgcacttgataggtgctctaccacagagctatagtcttagcc
taaaggctaacttttcaatccactgttaaacactaaaacttgagcaatgg
ggtgctggaaaaatgtgcagcagttaagagtgcttgctgctcttgtagag
gttcctacttgaggtcccagcacctacatcagatggcttacaatcaccta
taactccagttctaggaacctaacatcttctggcctctatgagcacataa
cacagagacacacggagatacatacacactgagatacatacacacggata
gatagatagatagatagatagatagatagatagatagatagatcgacttt
ttaaaaaaataaatgggctgggtaattagtaaaggtattagcctttaatc
aagcactctagaggcagaggcagaagatctcctgtgagtttgagaacagc
tggctcacgagctagcttcaggaacagcagaagctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_74540251_74541440
seq2: B6Ng01-304H05.b_47_1236 (reverse)

seq1  GTGTGTT---ACA-GTTCTGTGCGTTTTCAGTTAGTTGCTAACACTGTAT  46
      |||||||   ||| ||||| |||| |||||||||| ||||||||||||| 
seq2  GTGTGTTAACACAGGTTCTATGCGCTTTCAGTTAG-TGCTAACACTGTA-  48

seq1  ATCCACTTTGACAAATACTTG-TCTAATGAAAATGGAGAATTAAGACATC  95
      || |||||  |||| |||||| ||||||| ||   ||||||| |||||||
seq2  AT-CACTTGAACAATTACTTGTTCTAATGGAA--TGAGAATT-AGACATC  94

seq1  TGTGCCATCAATCATAGTTCATAAGTCCTTCTGTAGAACCTAGGTCTCCT  145
      |||||||||||||||||||||| |||||||||||||||| |||   ||||
seq2  TGTGCCATCAATCATAGTTCAT-AGTCCTTCTGTAGAACTTAGTCTTCCT  143

seq1  CAGGAGAAATTTACT-AATGGATGTCTTGAG-TAGTGTTTATAT-TTTCT  192
      || |||||||||||| ||||||||||||||| |||||||| ||| |||||
seq2  CA-GAGAAATTTACTAAATGGATGTCTTGAGTTAGTGTTT-TATATTTCT  191

seq1  TGTGGAAAAAATAAACATTT-CATTTTTTTTCCTAAGAACAATCTAACAA  241
      ||||| |||||||||||||| |||||||||||||||||||||||||||||
seq2  TGTGG-AAAAATAAACATTTCCATTTTTTTTCCTAAGAACAATCTAACAA  240

seq1  TCCCTCCATTCATTTGAATTACAAATCTTTATTTTT-CCAGTAGACATTT  290
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  TCCCTCCATTCATTTGAAATACAAATCTTTATTTTTCCCAGTAGACATTT  290

seq1  TCAAAATGGAAACATTTGTTTCAATTGCTGCAGCAAAATTAGTGTTACTT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGGAAACATTTGTTTCAATTGCTGCAGCAAAATTAGTGTTACTT  340

seq1  AAAACAATTCTGCAAATAAGCTGACTGGAAGAAACAGTCCAAAAATATTG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAATTCTGCAAATAAGCTGACTGGAAGAAACAGTCCAAAAATATTG  390

seq1  CTACTGGGGAGAGAACAAAATGTCTTCTATAAGTATGGCCAAAGGAAAAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGGGAGAGAACAAAATGTCTTCTATAAGTATGGCCAAAGGAAAAA  440

seq1  TGTTAAAACTTTGTTCTAAGGAGCTAGAGAGATTGCTCTGTAGGTAAAGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAACTTTGTTCTAAGGAGCTAGAGAGATTGCTCTGTAGGTAAAGT  490

seq1  GCTTGCTCCTCAAACATCAGGACCTGAGTTTGATGCCCAGCATGCTGGTA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTCCTCAAACATCAGGACCTGAGTTTGATGCCCAGCATGCTGGTA  540

seq1  AAAGTCGTGGGTGTCAACCACCACACACATGTGCAAGCAAATTCCCACAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCGTGGGTGTCAACCACCACACACATGTGCAAGCAAATTCCCACAT  590

seq1  ATGAACATAAACACACAAAAGAAAAATCACTCATCAAAAAAAAAAAAAAC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATAAACACACAAAAGAAAAATCACTCATCAAAAAAAAAAAAAAC  640

seq1  CAAAAAACAATTTTTTTGAAAGTTCAACTGGCCTCTGTAGTTTACAGGAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACAATTTTTTTGAAAGTTCAACTGGCCTCTGTAGTTTACAGGAA  690

seq1  AATGTCCAATGTCATGTGTGAAAATAATAGAGAAATAAACTAACAAATGG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCAATGTCATGTGTGAAAATAATAGAGAAATAAACTAACAAATGG  740

seq1  TAAGAAGGAAGCTTGGGGGAATGCAAGTTATATAAGTTAAAGTCCATCCA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGGAAGCTTGGGGGAATGCAAGTTATATAAGTTAAAGTCCATCCA  790

seq1  GAAGAGAACCATGACCCAACTGACCAGGCACTGACTCTAGGAGAGTTTCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAACCATGACCCAACTGACCAGGCACTGACTCTAGGAGAGTTTCA  840

seq1  CTCATTAACTTGGGTACTTGAAATTCCACAAGGCATAGATATGTCAGTGT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTAACTTGGGTACTTGAAATTCCACAAGGCATAGATATGTCAGTGT  890

seq1  GGGCAGATCCAACTAGACCAGTCATTCTTCTCAGCATCGTGACATCCGGA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGATCCAACTAGACCAGTCATTCTTCTCAGCATCGTGACATCCGGA  940

seq1  TGTGTCATGAAATTGCGAGCACATAAAAGCAAATGAAAGGGAATCCACAG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCATGAAATTGCGAGCACATAAAAGCAAATGAAAGGGAATCCACAG  990

seq1  AGTCAAACTCTCAGCTTAGTAGAACAAGGAGGAGCCAGAGGGAACCTTTA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAACTCTCAGCTTAGTAGAACAAGGAGGAGCCAGAGGGAACCTTTA  1040

seq1  TAATCCAAAACCTTTAAATAGACATGAAATATACATAGGAAAAAAAACCT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCAAAACCTTTAAATAGACATGAAATATACATAGGAAAAAAAACCT  1090

seq1  ATGGGGGGGGGGGGGGAATGGGTGAGCAGGTAGAAGCATTTGATGAGACA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGGGGGGGGGGGAATGGGTGAGCAGGTAGAAGCATTTGATGAGACA  1140

seq1  ACACGAGTTCCATCATCCAGATCCACTGATAAGATGAGAAAACTGAATTC  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAGTTCCATCATCCAGATCCACTGATAAGATGAGAAAACTGAATTC  1190

seq1: chr11_74415870_74416953
seq2: B6Ng01-304H05.g_65_1151

seq1  GAATTCAATTTACTAACTTAGGAAATGTGTTTTACCAAACTGGATCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTACTAACTTAGGAAATGTGTTTTACCAAACTGGATCTCAT  50

seq1  GGAATGTAAGGAAAAAAATGGACCATCGGCAAATATCTTCCTGACCACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTAAGGAAAAAAATGGACCATCGGCAAATATCTTCCTGACCACCC  100

seq1  TGCTGTGTGTCTGAAATTCCACTGAACAGTCCTTGCATGGAAATTAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTGTCTGAAATTCCACTGAACAGTCCTTGCATGGAAATTAGCTA  150

seq1  CTGCCCTACTGCCCAGGGTTTTGTTTTACTGTTGGTTTGGTTTTGGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTACTGCCCAGGGTTTTGTTTTACTGTTGGTTTGGTTTTGGTTTG  200

seq1  GTTTGGCTGTGTCTTAGTTAGGGTTTTACTGCTGTGAGCAGATACCATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCTGTGTCTTAGTTAGGGTTTTACTGCTGTGAGCAGATACCATGA  250

seq1  CATTTAATTTGGGCTGGCTTACAGGTTCAGAGGTTCAACCCATTATCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAATTTGGGCTGGCTTACAGGTTCAGAGGTTCAACCCATTATCATC  300

seq1  AAGGCAGGAGCATGACAGCATCTAGGCAGGCATGGTGCAGGCAGAGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGAGCATGACAGCATCTAGGCAGGCATGGTGCAGGCAGAGCTGA  350

seq1  GAGTTCTACATCTTCATCTGAAGGCTGCTAGAAAACTGACTTCCAGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTACATCTTCATCTGAAGGCTGCTAGAAAACTGACTTCCAGGCAG  400

seq1  CTAGGATGAGGGTCTTAAGCCCATGCTCACAGTGACACACCCACTCCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATGAGGGTCTTAAGCCCATGCTCACAGTGACACACCCACTCCAAC  450

seq1  AAGGCCATACCTCCTACTAGCGCCACGCCCTGAGCCAAGCATATATAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCATACCTCCTACTAGCGCCACGCCCTGAGCCAAGCATATATAAAC  500

seq1  CATCACAGGGTGTCTGTCTGTCTGTCTGTCTGTCTCTCTGGCTCTCTGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAGGGTGTCTGTCTGTCTGTCTGTCTGTCTCTCTGGCTCTCTGGC  550

seq1  TCTGTCTGTGTGTGTGAGAGAGAGACAGAGAAAGAGACTAGAGATTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTGTGTGTGAGAGAGAGACAGAGAAAGAGACTAGAGATTAAAA  600

seq1  TCAGACTTTGCACTTGATAGGTGCTCTACCACAGAGCTATAGTCTTAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTTTGCACTTGATAGGTGCTCTACCACAGAGCTATAGTCTTAGCC  650

seq1  TAAAGGCTAACTTTTCAATCCACTGTTAAACACTAAAACTTGAGCAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCTAACTTTTCAATCCACTGTTAAACACTAAAACTTGAGCAATGG  700

seq1  GGTGCTGGAAAAATGTGCAGCAGTTAAGAGTGCTTGCTGCTCTTGTAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGAAAAATGTGCAGCAGTTAAGAGTGCTTGCTGCTCTTGTAGAG  750

seq1  GTTCCTACTTGAGGTCCCAGCACCTACATCAGATGGCTTACAATCACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTACTTGAGGTCCCAGCACCTACATCAGATGGCTTACAATCACCTA  800

seq1  TAACTCCAGTTCTAGGAACCTAACATCTTCTGGCCTCTATGAGCACATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCCAGTTCTAGGAACCTAACATCTTCTGGCCTCTATGAGCACATAA  850

seq1  CACAGAGACACACGGAGATACATACACACTGAGATACATACACACAGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CACAGAGACACACGGAGATACATACACACTGAGATACATACACACGGATA  900

seq1  GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACTTT  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATCGACTTT  950

seq1  TTAAAAAAATAAAT-GGCTGGGT-ATTAGTAAAGGTATTAGCCTTTAATC  998
      |||||||||||||| |||||||| ||||||||||||||||||||||||||
seq2  TTAAAAAAATAAATGGGCTGGGTAATTAGTAAAGGTATTAGCCTTTAATC  1000

seq1  CAGCACTCTAGAGGCAGAGGCAGGAAGATCT-CTGTGAGTTTGAGACCAG  1047
       ||||||||||||||||||||| |||||||| |||||||||||||| |||
seq2  AAGCACTCTAGAGGCAGAGGCA-GAAGATCTCCTGTGAGTTTGAGAACAG  1049

seq1  CCTGGTCTACAGAGCTAGC-TCAGG-ACAGCAG-AGCTAC  1084
       |||| ||   |||||||| ||||| ||||||| ||||||
seq2  -CTGG-CTCACGAGCTAGCTTCAGGAACAGCAGAAGCTAC  1087