BAC Information

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BAC

Clone NameB6Ng01-310F17
Chromosome11 (Build37)
Map Location 54,366,450 - 54,366,618
singlet/doubletsinglet
Overlap geneRapgef6
Upstream geneKif3a, Il4, Il13, LOC667731, Rad50, Il5, Irf1, LOC622459, Slc22a5, LOC667762, Slc22a21, Slc22a4, Pdlim4, P4ha2, LOC623647, Dbi-ps, Csf2, Il3, Acsl6, 4930404A10Rik, LOC100041400, LOC100041411, Fnip1
Downstream geneCdc42se2, LOC677786, LOC100041463, Lyrm7, Hint1, Gpx3, Tnip1, LOC667826, Anxa6, Ccdc69, Gm2a, LOC667832, Slc36a3, Slc36a2, Slc36a1, Fat2, Sparc, Atox1, G3bp, Glra1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310F17.bB6Ng01-310F17.g
ACCGA102355GA102356
length8681,137
definitionB6Ng01-310F17.b B6Ng01-310F17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgtttatctctgttccccattttttaataaggttatttggtt
ctctggatgaaacccaagaggaaggaagaccaaaatgtgaatgtttcagt
gctttttagaagagtgaacaaaactcagaaggaaatatggagacaaagag
tagagcagagaaggaaggaaaggtcatccagggactagcccaccagggga
tccatcccatatatagccaccaaaccctgactttattgtggatgccaaga
agtgtttgctgatggaagcctgatatggctgtctcctgagaggctctgat
agagcctgacaaagtcagaggcagatgcttgcaggcaacctttgaactga
tcttagggggtccctgatggaggagttggagaagggactgaaggagctga
gggggggttgcaaccccatggatggagcaacaatgtcaacagaccggacc
cccatcccgagctcccaggaactgcaccaccacccaaagaatacacatgg
agccacccgtagcgctggctgcatatgtgacagaggatggccttgttgga
catcagtgggaggagaggatcttgggcctgagggtgttcaatgtcccagt
gtaggggaatgccagggcaggaggacaggagtgggagggtctgtgggggc
acaccctcatagatgcaggagaagggatgatgggatgggggtgctgcctc
agtctcagtgctaggattttttgcagtctgcctgctccatctagctagat
aaaattaatattgtaactcttttcgttctttactttcagagctaatgtac
atttttttttttcctcagtgacaatatattttttgaaatatattttcggt
ggatgcaattgccacatt
gaattctcagtttaattctataccccatttttgattgggttgtatccctt
ttttggtggttagcctcttgagatctttatatatttgggatgttacccct
ctatgggatgtggggttagtgaagattctttcccaatttgtaggttgtcg
atttgtcttattgactatgtcctctgtcttacagaagctttccagtttca
tgaggtcccatttatcaattcttgatcttagagcctgagccattggagtg
ttgattaggaaatttccctccgtgccaatgagttcaaggctctttcccat
tttctcttccattagattcagtgtatctgattttacgttgaattccttga
tccacttggacttgagctttgtgcaagggtctatatgggtctagtttcat
ttttctatatatagattgccagttagatcagcaccacttattgaagatgc
tttctttttctccattgtatatttttggcttctttgtcaaagatgaagtg
tgcacaagtatgtagttttatttctgggtcttcaattctattacattgat
caacatgtctgtctctgtattaatatcacacagtatttttttcaataaaa
cttattatttttattggatattttctttatttacatttcaaatatttttt
tctttccaagtctcccattctgcaaccccctataacataccccctccctt
gcctctacgatggtgcttcccccccccccatccactcccatattcccacc
gctggcattcgcctacactgaagcattgaacaccatcacgtcccacggac
ctctcctctcactgatgtcaagaaggcatcctctacacatatgatgccag
agccgtgggtgataccatcatgtgtagtcattcggtaggatggtccagtc
tccagaagctggggttgggtatgagcacaatgaagacagatcgctctata
caatgaggacatcaaaacctcactcagtcctcactgatgactacttagaa
aagctctgaggataggcgtgagtgacttcttccagaactctatcaatgat
cagattggatctggctaatacgagatctatgatggtaattgaggaatctg
gcttactcgcatgcatgacgacgttagggtggcgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_54366450_54366618
seq2: B6Ng01-310F17.b_739_913

seq1  CTGCCTCAGTCTCAGTGCTAGGA-TTTTTGCAGTCTGCCTGCTCCATCTA  49
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTGCCTCAGTCTCAGTGCTAGGATTTTTTGCAGTCTGCCTGCTCCATCTA  50

seq1  GCTAGATAAAATTAATATTGTAACTC-TTTCGTTCTTTAC-TTCAGAGCT  97
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  GCTAGATAAAATTAATATTGTAACTCTTTTCGTTCTTTACTTTCAGAGCT  100

seq1  AATGTACA-TTTTTTTTTTCCTCAGTGACAATATA-TTTTTGAAATATAT  145
      |||||||| |||||||||||||||||||||||||| ||||||||||||||
seq2  AATGTACATTTTTTTTTTTCCTCAGTGACAATATATTTTTTGAAATATAT  150

seq1  TTTCGGTTGATGCAATTG-CACATT  169
      ||||||| |||||||||| ||||||
seq2  TTTCGGTGGATGCAATTGCCACATT  175