BAC Information

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BAC

Clone NameB6Ng01-311H18
Chromosome11 (Build37)
Map Location 92,524,085 - 92,525,173
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC382545, LOC100039286, Car10, LOC629636
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311H18.bB6Ng01-311H18.g
ACCGA103190GA103191
length9861,106
definitionB6Ng01-311H18.b B6Ng01-311H18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagtagactggagcagaaaagaaattcctcccgacacataata
gtcaaaaaaccaaatgcactaaacaaagatacaatattaagagcagtaag
ggaaaaaggtcaactaacatataaaggcagacctattagaattaaaccag
acttctcaccagagactatgaaagccagaagatcctggacagatgtcata
cagaccctaaaagaacacaaatgccagcccaggctagtatacccagcaaa
actctcaattaccatagatggagaaacaaagtattccatgataaaaccaa
attcacacaatatctttctatgaatccagcccttcaaaggataataaagg
gaatacaccaacacgaggagggaaactatgcacgagaaaaagcaagaaac
taatctttcaacaaacctgaaagaagatagccacctgaacagaatcccaa
cactatcaacaaaaataacaggaagcaacaaatgcttttacttaatatct
cttaatatcaatggactcaattccccaatacaaagacctaagctaacaga
ctgaatatacaagcaggacccagcattttactgcatacaagaaacacatt
taaataacaaagacagacaccacctcagagttaaagtctgaggaaaaaaa
aaaaaagaaggcttccaagaaaatgttcccaagacataagtgttatttgc
tattccaataaaatagactttaatcctaagttatcaagcaaaaaggcaga
aagacacttaaatttcaccaaaggaaaaacccaccaaaagaaagtctcat
ttctgaaaatctatgcccctaaatgaaaaggcgcgcacattcctaaaaga
aacttactaaagctcaaaatacacatgggaacccacatagcaattggaaa
cttcaacacccactctcaccaatggacaggtcgttgaaacagaaacttaa
catagacacagtaaaactatagagatggtttatgaa
gaattccaaatgtcatacacttgtagaaactctctgcagctggcaatcgc
acccctgctagagcacaccttaatcatagtcagctattgtggacaagcta
aaggaaccccatgtcctacacctgggattaaaacaaaaacatattcctat
gacatttctgtgtttttaaacaaaacaaaattttcaataccgaggagtac
tgatttactgacacacacagccagaacaccaaggatggagacaactttct
gcatctgtaataccaccaaggcaagatctggtccttgtggtcacttatct
atctagtagaggacttgaggagaggaaagaaaaaaaatgcttgcactcat
attttcatttacaagactagggaataaaggaacacagttgttgacaaaaa
tattttattatgtttcttttatattaaatatggtttatatgtgatcctgt
cattattctaaagcaatttagttgtgaatagtcaccctttcattattctt
atctaaacttaagttgatggtaattttaatcaatgaaatgttgaaggaaa
taagtgaaatgattatgtagggttttagaaatgttaggatacaaaagcaa
gtgatcacatactcttctaggaaattatgctatatttaatagtaacagag
gcttgcacttatagaaatcttaagtcttttaggaatgtacatttataagt
ttttaactatagaaaagaagttattgtagagttattagaagtggattaca
agagaagaaaacatttcagaaaaattggtttgttttctagctcttacagc
ctgcctagatacatcaaatgatactaaagtttttaaactatcaaaaacct
tataaatatactaaaatttattgttctgaagtgagtctaagatagatact
gtgttcgttaaagttagcttgtttctaatgactataatagggatgctatt
tgtcagcaattggccttcaccttgttactttcatctcagcatctttggga
aagaacaacttaaaagccctttaattttatattttcatttaagtctgtat
tgttcacctagacttgggaaattggtaaaccttatgaggcattgctaact
gctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92524085_92525173
seq2: B6Ng01-311H18.g_64_1169 (reverse)

seq1  AGCAGCAG-TAGCAATGCCTCATAAGTTTTACCAATT--CCAAGTCCTAG  47
      |||||||| ||||||||||||||||| ||||||||||  |||||||   |
seq2  AGCAGCAGTTAGCAATGCCTCATAAGGTTTACCAATTTCCCAAGTCTAGG  50

seq1  TGAACAATACAGACTT-AATG-AAATAT-AAATTAAA-GGCTTTTA--GT  91
      |||||||||||||||| |||| |||||| |||||||| ||||||||   |
seq2  TGAACAATACAGACTTAAATGAAAATATAAAATTAAAGGGCTTTTAAGTT  100

seq1  GTTCTT--CCAAAGATGCTGAGATG-AAGTAACAAGGTGAAAGCCAA-TG  137
      ||||||  ||||||||||||||||| ||||||||||||||| ||||| ||
seq2  GTTCTTTCCCAAAGATGCTGAGATGAAAGTAACAAGGTGAAGGCCAATTG  150

seq1  CTGACAAATAGCATCCCTA-TATAGTCATTAG-AACAAGCTAACTTTAAC  185
      ||||||||||||||||||| |||||||||||| |||||||||||||||||
seq2  CTGACAAATAGCATCCCTATTATAGTCATTAGAAACAAGCTAACTTTAAC  200

seq1  GAACACAGTATCTATCTTAGACTCACTTCAGAACAATAAA-TTTAGTATA  234
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAACACAGTATCTATCTTAGACTCACTTCAGAACAATAAATTTTAGTATA  250

seq1  TTTAT-AGGTTTTTGATAGTTTAAAAACTTTAGTATCATTTGATGTATCT  283
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGGTTTTTGATAGTTTAAAAACTTTAGTATCATTTGATGTATCT  300

seq1  AGGCAGGCTGTAAGAGCTAGAAAACAAACCAATTTTTCTGAAATGTTTTC  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCTGTAAGAGCTAGAAAACAAACCAATTTTTCTGAAATGTTTTC  350

seq1  TTCTCTTGTAATCCACTTCTAATAACTCTACAATAACTTCTTTTCTATAG  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTGTAATCCACTTCTAATAACTCTACAATAACTTCTTTTCTATAG  400

seq1  TTAAAAACTTATAAATGTACATTCCTAAAAGACTTAAGATTTCTATAAGT  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACTTATAAATGTACATTCCTAAAAGACTTAAGATTTCTATAAGT  450

seq1  GCAAGCCTCTGTTACTATTAAATATAGCATAATTTCCTAGAAGAGTATGT  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCCTCTGTTACTATTAAATATAGCATAATTTCCTAGAAGAGTATGT  500

seq1  GATCACTTGCTTTTGTATCCTAACATTTCTAAAACCCTACATAATCATTT  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTTGCTTTTGTATCCTAACATTTCTAAAACCCTACATAATCATTT  550

seq1  CACTTATTTCCTTCAACATTTCATTGATTAAAATTACCATCAACTTAAGT  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATTTCCTTCAACATTTCATTGATTAAAATTACCATCAACTTAAGT  600

seq1  TTAGATAAGAATAATGAAAGGGTGACTATTCACAACTAAATTGCTTTAGA  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAAGAATAATGAAAGGGTGACTATTCACAACTAAATTGCTTTAGA  650

seq1  ATAATGACAGGATCACATATAAACCATATTTAATATAAAAGAAACATAAT  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGACAGGATCACATATAAACCATATTTAATATAAAAGAAACATAAT  700

seq1  AAAATATTTTTGTCAACAACTGTGTTCCTTTATTCCCTAGTCTTGTAAAT  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTTTGTCAACAACTGTGTTCCTTTATTCCCTAGTCTTGTAAAT  750

seq1  GAAAATATGAGTGCAAGCATTTTTTTTCTTTCCTCTCCTCAAGTCCTCTA  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATGAGTGCAAGCATTTTTTTTCTTTCCTCTCCTCAAGTCCTCTA  800

seq1  CTAGATAGATAAGTGACCACAAGGACCAGATCTTGCCTTGGTGGTATTAC  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAGATAAGTGACCACAAGGACCAGATCTTGCCTTGGTGGTATTAC  850

seq1  AGATGCAGAAAGTTGTCTCCATCCTTGGTGTTCTGGCTGTGTGTGTCAGT  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGAAAGTTGTCTCCATCCTTGGTGTTCTGGCTGTGTGTGTCAGT  900

seq1  AAATCAGTACTCCTCGGTATTGAAAATTTTGTTTTGTTTAAAAACACAGA  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTACTCCTCGGTATTGAAAATTTTGTTTTGTTTAAAAACACAGA  950

seq1  AATGTCATAGGAATATGTTTTTGTTTTAATCCCAGGTGTAGGACATGGGG  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATAGGAATATGTTTTTGTTTTAATCCCAGGTGTAGGACATGGGG  1000

seq1  TTCCTTTAGCTTGTCCACAATAGCTGACTATGATTAAGGTGTGCTCTAGC  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTAGCTTGTCCACAATAGCTGACTATGATTAAGGTGTGCTCTAGC  1050

seq1  AGGGGTGCGATTGCCAGCTGCAGAGAGTTTCTACAAGTGTATGACATTTG  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTGCGATTGCCAGCTGCAGAGAGTTTCTACAAGTGTATGACATTTG  1100

seq1  GAATTC  1089
      ||||||
seq2  GAATTC  1106