BAC Information

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BAC

Clone NameB6Ng01-313D11
Chromosome11 (Build37)
Map Location 25,607,524 - 25,608,181
singlet/doubletsinglet
Overlap gene5730522E02Rik
Upstream geneLOC100042282
Downstream geneLOC100042328, LOC100042345, Fancl, Vrk2, EG628586
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313D11.bB6Ng01-313D11.g
ACCGA104492GA104493
length1,218654
definitionB6Ng01-313D11.b B6Ng01-313D11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttaatgggattatttgattt
tctggagtccaccttcttgagttctttgtatatattggatattagtcccc
tatctgatttaggattgttaaagatcctttcccaatctgttggtggcctt
tttgtcttattgacggtgtcttttgctttgcagaagctttgcaattttat
gaggtcccatttgtagattcttgatcttacagcaccagccattgctgttc
tgctcaggaatttttcccctgtgcccatatcttcgaggctttcccccaat
ttctcctctataagtttcagtctcttgttttatgtggagttccttaatcc
acttagacttgagctttgtacaggagataagaatggatcaattcgaattc
ttctacatgctaactgcaagttgtgccagcaccatttgttgaaaatgctg
tcttttttcctttgtcaaagatcaagtgaccatagttgtgtgggttcatt
tctgtgtcttcaattctattccattgatcgacctgtctctctctgtacca
gtaccatgcagtttttaacacaattgctctgtagtacagctttaggtcag
gcatggtgattccaccagaggttcttttattgttgagaataatttttgct
atcctaggttttttgttattccagatcaatttacaaatttcctgttctaa
ctcagtgaagaattgagtaggaattttgatggggattacattgaatctgt
agattgctttcggcaaaatagccattttcactatattaatcctgccaatt
caagagcatgggagatctttctaacttctgagattatcttaaatttattt
cttcagatacttgaagttcttagcatacagttcttttcacctccttagtt
agagtcacaccaaggtatttttatattatttgtgactattgagaagggtg
ttgtttccctaatttctttttcagcctgtttatcctttgtgtagtgaaag
gcactgatttgtttgagttaattttatatccagctatttcactgaagctt
gtttcccagggttagagttctctggtgattttaggtccactatattatac
tatcatatcatctgcaaatagtgaatttttgacttcttctttccaattgg
atcgcttgattctctttggtgtgctaattgacttctgcttgaggacttca
agaatacagctgtattgc
gaattccaaaggcaacggaagcctgatatctatttgctatagaagtttac
acttctcctaattggaagttcaaagctctccctgtagatattacccacac
gagagttactgtgatgcccttcaatacagggtgcagagtctgggtcaaac
gtttcataggaactgaaaactcattgatgtttttttttgtttttttggtt
ttttgtttgtttgtttttttttttttttctggtgtatggcttctgtgatt
ccatgcagcacctttgtgtggcttaaaacactgaggccttttcatggcag
gatgctggtgggagaagttagaggagccccatattcatggaacttttcat
ttctgcctcttacagacagttcaaagtttcacagtggcacaatgattttg
gtaaatttaacaagaacctctaaaaagataatctcttttatgatttattc
tttctttctttctttctttctttctttctttctttctttccttttattta
tttatttatttatttatttatttatttatttatttatttattgtgtaaat
aggatgatcttgaatgaaagggtctgaagctacagagcactttctatctg
ctcattttttttcaatttctgaaatgatgctacttactgtgggggtgggg
gagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_25607524_25608181
seq2: B6Ng01-313D11.g_66_719

seq1  GAATTCCAAAGGCAACGGAAGCCTGATATCTATTTGCTATAGAAGTTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGCAACGGAAGCCTGATATCTATTTGCTATAGAAGTTTAC  50

seq1  ACTTCTCCTAATTGGAAGTTCAAAGCTCTCCCTGTAGATATTACCCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCTAATTGGAAGTTCAAAGCTCTCCCTGTAGATATTACCCACAC  100

seq1  GAGAGTTACTGTGATGCCCTTCAATACAGGGTGCAGAGTCTGGGTCAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTACTGTGATGCCCTTCAATACAGGGTGCAGAGTCTGGGTCAAAC  150

seq1  GTTTCATAGGAACTGAAAACTCATTGATGTTTTTTTTTGTTTTTTTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCATAGGAACTGAAAACTCATTGATGTTTTTTTTTGTTTTTTTGGTT  200

seq1  TTTTGTTTGTTTGTTTTTTTTTTTTTTTCTGGTGTATGGCTTCTGTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTGTTTTTTTTTTTTTTTCTGGTGTATGGCTTCTGTGATT  250

seq1  CCATGCAGCACCTTTGTGTGGCTTAGAACACTGAGGCCTTTTCATGGCAG  300
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCATGCAGCACCTTTGTGTGGCTTAAAACACTGAGGCCTTTTCATGGCAG  300

seq1  GATGCTGGTGGGAGAAGTTAGAGGAGCCCCATATTCATGGAACTTTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGTGGGAGAAGTTAGAGGAGCCCCATATTCATGGAACTTTTCAT  350

seq1  TTCTGCCTCTTACAGACAGTTCAAAGTTTCACAGTGGCACAATGATTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCCTCTTACAGACAGTTCAAAGTTTCACAGTGGCACAATGATTTTG  400

seq1  GTAAATTTAACAAGAACCTCTAAAAAGATAATCTCTTTTATGATTTATTC  450
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  GTAAATTTAACAAGAACCTCTAAAAAGATAATCTCTTTTATGATTTA---  447

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTTA  500
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTTTTA  496

seq1  TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTGTGT  546

seq1  AAATAGGATGATCTTGAATGAAAGGGTCTGAAGCTACAGAGCACTTTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGATGATCTTGAATGAAAGGGTCTGAAGCTACAGAGCACTTTCTA  596

seq1  TCTGCTCATTTTTTTTCAATTTCTGAAATGATGCTACTTACTGTGGGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCATTTTTTTTCAATTTCTGAAATGATGCTACTTACTGTGGGGGT  646

seq1  GGGGGAGG  658
      ||||||||
seq2  GGGGGAGG  654