BAC Information

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BAC

Clone NameB6Ng01-313O15
Chromosome11 (Build37)
Map Location 105,999,868 - 106,000,678
singlet/doubletsinglet
Overlap geneMap3k3
Upstream geneMettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807, Tanc2, LOC667737, Cyb561, Ace, EG217246, Kcnh6, Wdr68, Ccdc44
Downstream geneLimd2, 2610019A05Rik, 2610204L23Rik, Ddx42, Ftsj3, Psmc5, Smarcd2, Tcam1, Gh, Cd79b, Scn4a, 2310007L24Rik, Icam2, Ern1, LOC100041277, Tex2, Pecam1, Gm885, Polg2, Ddx5, Ccdc45, Smurf2, LOC666873, Kpna2, 1810010H24Rik, Bptf, LOC100042899
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-313O15.bB6Ng01-313O15.g
ACCGA104995GA104996
length1,248788
definitionB6Ng01-313O15.b B6Ng01-313O15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtcagcc
ctgcgcagagaggcagtgcgcagactcattcattcccagagaagaacaaa
ggaaaatacaacaggcatttccggtctttaaaggagccgagggtgggcgt
gtccacgctccggtagaatacttacaaattaaagaaattgccgagtcggt
ccgtaaatacggaaccaatgctaattttaccttggtgcagttagacaggc
ttgccggcatggcactaactcctgctgactggcaaacggttgtaaaagcc
gctctccctagtatgggcaaatatatggaatggagagctctttggcatga
aactgcacaagcgcaggcccgagcaaacgcagctgctttgaatccagagc
agagagattggacttttgacttgttaacgggtcagggagcttattctgct
gatcaaacaaactaccattggggagcttatgcccagatttcttccacggc
tattagggcctagaaggcgctctctcgagcaggtgaaaccactgggcagt
taacaaagataatccagggacctcaggaatccttctcagattttgtggcc
agaatgacagaggcagcagagcgtatttttagagagtcagagcaagctgc
gcctctgatagaacagctaatctatgagcaagccacaaaagagtgccgag
cggccatagccccaagaaagaacaaaggcttacaagactggctcaggtct
gtcgagagcttgggggacctctcaccaatgcagcttagcggccgccatcc
tccaatctcaaaacgctcatgagcagaaataatcagaggacatgtttaac
tgcggaaagcctgggcattttaagaaagaattgcagagctccagattaaa
caaggaggactctccactcttttgcctctagtgtgtggcaaggatatcat
agagtcgatcagtggtcgcctctgtgtgaggaataaagcagaattcttcc
ctcactgtatagtcattcagcttatgtgcaaacgttaatcgtccttgtcc
aggcttcagaatgatcggtgttctagaccagagagcagtctgaaggct
gaattccaggacagccagggctacacatcctgtctcgaaaaacaaaaaac
aaaaaaaaaaaagaaaaaaaaaagagaaagaaagaaagaaggaaggaagg
aaggaaggaaagaaagaaaggaaagaaagaaaggaaggaaggaaggaagg
aaggaaggaaggaaggaaggaaggaaggaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaactc
agctgataaaccaatgtacgggaccttttatttatacttcttctcatagt
ttcagtcactaccagtgaactatttagaatttatgtttgttttattcatg
gtgtcttatatctcaggctggcctttaacacattatgtagcagaaatgcc
tctacttcctaggtacaaggattataggcacatgccataaggtctggctc
tattttcttttttttttttttttaagattgattgattgattgattatatg
taagtacactgtagctgttttccgacacaccagaagagggcatcaatctt
attacagatggttgtgagctaccatgtggttgctggattgtactcagacc
ttggaagagcagtcagtgctcttaaccactgagcatctctccacccttct
ttttttaagaaagttacctagttggctcttcctacctcagctcataactc
aacatctagcgcagcagaattattattatacataagtacattatgtagct
gtcttcagatgcaccagagaggcatcagatcttgttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_105999868_106000678
seq2: B6Ng01-313O15.g_69_856

seq1  GAATTCCAGGACAGCCAGGGCTACACATCCTGTCTCGAAAAACAAAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAGGGCTACACATCCTGTCTCGAAAAACAAAAAAC  50

seq1  AAAAAAAAAAAAGAAAAAAAAAAGAGAAAGAAAGAAAGAAGGAAGGAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAGAAAAAAAAAAGAGAAAGAAAGAAAGAAGGAAGGAAGG  100

seq1  AAGGAAGGAAAGAAAGAAAGGAAAGAAAGAAAGGAAGGAAGGAAGGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAAGAAAGAAAGGAAAGAAAGAAAGGAAGGAAGGAAGGAAGG  150

seq1  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAA  200

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAACTC  250

seq1  AGCTGATAAACCAATGTACGGGACCTTTTATTTATACTTCTTCTCATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATAAACCAATGTACGGGACCTTTTATTTATACTTCTTCTCATAGT  300

seq1  TTCAGTCACTACCAGTGAACTATTTAGAATTTATGTTTGTTTTATTCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCACTACCAGTGAACTATTTAGAATTTATGTTTGTTTTATTCATG  350

seq1  GTGTCTTATATCTCAGGCTGGCCTTTAACACATTATGTAGCAGAAATGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTATATCTCAGGCTGGCCTTTAACACATTATGTAGCAGAAATGCC  400

seq1  TCTACTTCCTAGGTACAAGGATTATAGGCACATGCCATAAGGTCTGGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTTCCTAGGTACAAGGATTATAGGCACATGCCATAAGGTCTGGCTC  450

seq1  TATTTTCTTTTTTTTTTTTTTTTAAGATTGATTGATTGATTGATTATATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTTTTTTTTTTTTTTTTAAGATTGATTGATTGATTGATTATATG  500

seq1  TAAGTACACTGTAGCTGTTTTCCGACACACCAGAAGAGGGCATCAAATCT  550
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAAGTACACTGTAGCTGTTTTCCGACACACCAGAAGAGGGCATC-AATCT  549

seq1  TATTACAGATGGTTGTGAGCTACCATGTGGTTGCTGGGATTTGTACTCAG  600
      |||||||||||||||||||||||||||||||||||||   ||||||||| 
seq2  TATTACAGATGGTTGTGAGCTACCATGTGGTTGCTGG--ATTGTACTCA-  596

seq1  GACCTTTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAA  650
      |||| ||||||||||||||||||||||||||||||||| |||||||||| 
seq2  GACC-TTGGAAGAGCAGTCAGTGCTCTTAACCACTGAG-CATCTCTCCA-  643

seq1  CCCCTTCTTTTTTTTTAAGAAAAGTTACCCTAGGTTGGCTTCTTCCTACC  700
       ||||||  |||||||||| ||||||| |||| |||||| ||||||||||
seq2  -CCCTTC--TTTTTTTAAG-AAAGTTA-CCTA-GTTGGC-TCTTCCTACC  686

seq1  TCAGCTCCATAAACTCAACATCTAGCGCAGCCAGAAAATTTTATTATTAT  750
      |||||| ||| ||||||||||||||||||| |||||    ||||||||||
seq2  TCAGCT-CAT-AACTCAACATCTAGCGCAG-CAGAA----TTATTATTAT  729

seq1  ACATAAGTACATTATGTAGCTGTCTTCAGATGCACCAGAAGAGGGCATCA  800
      |||||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  ACATAAGTACATTATGTAGCTGTCTTCAGATGCACCAG-AGA-GGCATCA  777

seq1  GATCTCGTTAC  811
      ||||| |||||
seq2  GATCTTGTTAC  788