BAC Information

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BAC

Clone NameB6Ng01-316O08
Chromosome11 (Build37)
Map Location 67,068,852 - 67,225,765
singlet/doubletdoublet
Overlap geneMyh4, Myh8, Myh13
Upstream geneGm879, LOC668323, A530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1
Downstream geneGas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8, Ntn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316O08.bB6Ng01-316O08.g
ACCGA107177GA107178
length9771,083
definitionB6Ng01-316O08.b B6Ng01-316O08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,225,176 - 67,225,765)(67,068,852 - 67,069,931)
sequence
gaattctttaagttattgtcctatgagaacttactgttagcctgcttaac
taagtacagtgtgcatgagaatgagggaggtggagggaagacatcttcta
aagtgtagggtcaagggagaacctgacatatttggatgtctgcaattgct
gctgtaggagggtgctgtcttggctaggttatggttctgtagtaccacag
acttgatgacttacacaacaggcctttgtttcccacagttctggaagatg
gaagtccaagacaatcaccagcagattctgtacctgatgaggcctctcct
ggtttgcaggtggctgcttctccaccacttccttgtgatggaggcaggag
agggagacaagtataagctatcctcttcctcttccaccactcctccttta
catcctcctctccccttcttcttttgagacatgatctaactatacatagt
cacatagctatagccctggctagtgtggagttcactatgcagaccaggct
ggccttgaactcacagatatcttcctgcttctgcctcccaagtgctggga
taaaaggtgtgcaccaccactcctggcttccttaagaggacactgatctc
acagtaagggtctcaccctcatggtcttatctgctcctaatcgccttcca
gagaccttatctccaaacgctatcacagggatagtgggtcaagtaaatct
gggagaatatcaatgcccaatatgtaacctgtgagaagaaacaagaggca
actgaatcacaaaggagtttgagtgtcagataaagaacttgggaatcaaa
ttggggaatgacgtcatcaaacctagcttagaaaagtaattccagaatcc
cctttcctgatctaccttcagcttagtttccttccttcccttcgccctgt
ttcttttccccatgctctcacacttttcattgtttgaaacagtctcatta
aagtagcccaaccttgccttggaattt
gaattccaaatgcgcttctcttgaaaagacgaagcagcggcttcagaatg
aagtggaggacctcatgattgacgtggagaggtctaacgctgcctgcgct
gcgcttgataagaagcagaggaactttgacaaggtggcccaccggacctg
ggacttacaactggggaaaggggggcactctgcctggcttcatagcctaa
ctaatgacgcgcttccaggtcctggcagaatggaaacagaagtacgagga
aactcaggctgagcttgaagcctcccagaaggagtcccgctctctgagca
ctgagctgttcaaagtgaagaatgcctatgaggagtctctggatcaactt
gagacgttaaagagagagaacaagaacctgcagcgtaagccccaagcttc
acaaccccgcttagctctaactgggttcttccattctgccaccattcatt
ccaacctcttcctttcatctgttcttccgcagaggagatctctgacctga
ccgagcagattgctgagggagggaagcacatccatgagctggagaaaatc
aagaagcaaattgatcaggaaaagagtgaattacaggcttctctggagga
agcggaggtatatgctttgtttgctcacccatctgttaaggagaattgca
actggaatctaccacgtcctaagctcccagggacaatgtataccaccaag
gaaaacctagacatatataccactcaaatgcaggatcaataatctaagtt
aggatatattgaaagaatgggaggagggctaaatgtcttcttgagaaacc
accatagtgaggtcaccaaaatgttgcttttatcaaggcatcccttgaac
atgaagaaaggtaaaatcctacgcatccagctggagttgaaccaggtgaa
aatctgagattgaccgcaaatttgctgaaaaagatgaagagatagatcag
ctgaaggagaaaccacctcagagttgtgggagttccatgcagagccacgc
tggacgcgagatcgcagcagaatgatgctctgagattaagaagaagatgg
aagggagacctcatgagatggagattccagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67225176_67225765
seq2: B6Ng01-316O08.b_50_639 (reverse)

seq1  TCCTCTTAAGGAAGCCAGGAGTGGTGGTGCACACCTTTTATCCCAGCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTTAAGGAAGCCAGGAGTGGTGGTGCACACCTTTTATCCCAGCACT  50

seq1  TGGGAGGCAGAAGCAGGAAGATATCTGTGAGTTCAAGGCCAGCCTGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCAGAAGCAGGAAGATATCTGTGAGTTCAAGGCCAGCCTGGTCT  100

seq1  GCATAGTGAACTCCACACTAGCCAGGGCTATAGCTATGTGACTATGTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTGAACTCCACACTAGCCAGGGCTATAGCTATGTGACTATGTATA  150

seq1  GTTAGATCATGTCTCAAAAGAAGAAGGGGAGAGGAGGATGTAAAGGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATCATGTCTCAAAAGAAGAAGGGGAGAGGAGGATGTAAAGGAGGA  200

seq1  GTGGTGGAAGAGGAAGAGGATAGCTTATACTTGTCTCCCTCTCCTGCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGAAGAGGAAGAGGATAGCTTATACTTGTCTCCCTCTCCTGCCTC  250

seq1  CATCACAAGGAAGTGGTGGAGAAGCAGCCACCTGCAAACCAGGAGAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAAGGAAGTGGTGGAGAAGCAGCCACCTGCAAACCAGGAGAGGCC  300

seq1  TCATCAGGTACAGAATCTGCTGGTGATTGTCTTGGACTTCCATCTTCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGGTACAGAATCTGCTGGTGATTGTCTTGGACTTCCATCTTCCAG  350

seq1  AACTGTGGGAAACAAAGGCCTGTTGTGTAAGTCATCAAGTCTGTGGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGGGAAACAAAGGCCTGTTGTGTAAGTCATCAAGTCTGTGGTACT  400

seq1  ACAGAACCATAACCTAGCCAAGACAGCACCCTCCTACAGCAGCAATTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACCATAACCTAGCCAAGACAGCACCCTCCTACAGCAGCAATTGCA  450

seq1  GACATCCAAATATGTCAGGTTCTCCCTTGACCCTACACTTTAGAAGATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCCAAATATGTCAGGTTCTCCCTTGACCCTACACTTTAGAAGATGT  500

seq1  CTTCCCTCCACCTCCCTCATTCTCATGCACACTGTACTTAGTTAAGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTCCACCTCCCTCATTCTCATGCACACTGTACTTAGTTAAGCAGG  550

seq1  CTAACAGTAAGTTCTCATAGGACAATAACTTAAAGAATTC  590
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGTAAGTTCTCATAGGACAATAACTTAAAGAATTC  590

seq1: chr11_67068852_67069931
seq2: B6Ng01-316O08.g_71_1153

seq1  GAATTCCAAATGCGCTTCTCTTGAAAAGACGAAGCAGCGGCTTCAGAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATGCGCTTCTCTTGAAAAGACGAAGCAGCGGCTTCAGAATG  50

seq1  AAGTGGAGGACCTCATGATTGACGTGGAGAGGTCTAACGCTGCCTGCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGAGGACCTCATGATTGACGTGGAGAGGTCTAACGCTGCCTGCGCT  100

seq1  GCGCTTGATAAGAAGCAGAGGAACTTTGACAAGGTGGCCCACCGGACCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTTGATAAGAAGCAGAGGAACTTTGACAAGGTGGCCCACCGGACCTG  150

seq1  GGACTTACAACTGGGGAAAGGGGGGCACTCTGCCTGGCTTCATAGCCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTACAACTGGGGAAAGGGGGGCACTCTGCCTGGCTTCATAGCCTAA  200

seq1  CTAATGACGCGCTTCCAGGTCCTGGCAGAATGGAAACAGAAGTACGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGACGCGCTTCCAGGTCCTGGCAGAATGGAAACAGAAGTACGAGGA  250

seq1  AACTCAGGCTGAGCTTGAAGCCTCCCAGAAGGAGTCCCGCTCTCTGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGGCTGAGCTTGAAGCCTCCCAGAAGGAGTCCCGCTCTCTGAGCA  300

seq1  CTGAGCTGTTCAAAGTGAAGAATGCCTATGAGGAGTCTCTGGATCAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTGTTCAAAGTGAAGAATGCCTATGAGGAGTCTCTGGATCAACTT  350

seq1  GAGACGTTAAAGAGAGAGAACAAGAACCTGCAGCGTAAGCCCCAAGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACGTTAAAGAGAGAGAACAAGAACCTGCAGCGTAAGCCCCAAGCTTC  400

seq1  ACAACCCCGCTTAGCTCTAACTGGGTTCTTCCATTCTGCCACCATTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCCGCTTAGCTCTAACTGGGTTCTTCCATTCTGCCACCATTCATT  450

seq1  CCAACCTCTTCCTTTCATCTGTTCTTCCGCAGAGGAGATCTCTGACCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTCTTCCTTTCATCTGTTCTTCCGCAGAGGAGATCTCTGACCTGA  500

seq1  CCGAGCAGATTGCTGAGGGAGGGAAGCACATCCATGAGCTGGAGAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGCAGATTGCTGAGGGAGGGAAGCACATCCATGAGCTGGAGAAAATC  550

seq1  AAGAAGCAAATTGATCAGGAAAAGAGTGAATTACAGGCTTCTCTGGAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCAAATTGATCAGGAAAAGAGTGAATTACAGGCTTCTCTGGAGGA  600

seq1  AGCGGAGGTATATGCTTTGTTTGCTCACCCATCTGTTAAGGAGAATTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGAGGTATATGCTTTGTTTGCTCACCCATCTGTTAAGGAGAATTGCA  650

seq1  ACTGGAATCTACCACGTCCTAAGCTCCCAGGGACAATGTATACCACCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAATCTACCACGTCCTAAGCTCCCAGGGACAATGTATACCACCAAG  700

seq1  GAAAACCTAGACATATATACCACTCAAATGCAGGATCAATAATCTAAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCTAGACATATATACCACTCAAATGCAGGATCAATAATCTAAGTT  750

seq1  AGGATATATTGAAAGAATGGGAGGAGGGCTAAATGTCTTCTTGAGAAACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATATTGAAAGAATGGGAGGAGGGCTAAATGTCTTCTTGAGAAACC  800

seq1  ACCATAGTGAGGTCACCAAAATGTTGCTTTTATCAAGGCATCCCTTGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGTGAGGTCACCAAAATGTTGCTTTTATCAAGGCATCCCTTGAAC  850

seq1  ATGAAG-AAGGTAAAATCCTACGCATCCAGCTGGAGTTGAACCAGGTG-A  898
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  ATGAAGAAAGGTAAAATCCTACGCATCCAGCTGGAGTTGAACCAGGTGAA  900

seq1  AATCTGAGATTGACCGCAAAATTGCTGAAAAAGATGAAGAGATAGATCAG  948
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATCTGAGATTGACCGCAAATTTGCTGAAAAAGATGAAGAGATAGATCAG  950

seq1  CTGAA-GAGAAACCACCTCAGAGTTGT-GGAG-TCCATGCAGAG-CACGC  994
      ||||| ||||||||||||||||||||| |||| ||||||||||| |||||
seq2  CTGAAGGAGAAACCACCTCAGAGTTGTGGGAGTTCCATGCAGAGCCACGC  1000

seq1  TGGACGCCGAGATCCGCAGCAGGAATGATGCTCTGAGGATTAAGAAGAAG  1044
      |||||| |||||| ||||||| |||||||||||||| |||||||||||||
seq2  TGGACG-CGAGAT-CGCAGCA-GAATGATGCTCTGA-GATTAAGAAGAAG  1046

seq1  ATGG-AGGGAGACCTCAATGAGATGGAGA-TCCAGCTG  1080
      |||| ||||||||||| |||||||||||| ||||||||
seq2  ATGGAAGGGAGACCTC-ATGAGATGGAGATTCCAGCTG  1083