BAC Information

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BAC

Clone NameB6Ng01-318C12
Chromosome12 (Build37)11 (Build37)
Map Location 25,421,240 - 25,421,27863,034,407 - 63,035,478
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG668701, LOC668471, LOC668703, LOC546534, 9030624G23Rik, EG668710, LOC100042945, EG668711, EG668714, LOC629364, Taf1b, Grhl1, EG629383, Klf11, Cys1, Rrm2
Downstream geneLOC668719, Mboat2, EG629397, C330002I19Rik, Id2, LOC100042973, LOC100042974
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318C12.bB6Ng01-318C12.g
ACCGA108116GA108117
length1801,069
definitionB6Ng01-318C12.b B6Ng01-318C12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(25,421,240 - 25,421,278)(63,034,407 - 63,035,478)
sequence
gaattctggggacttttcagagggatacaagtcctaaggccctgagaggc
acagtggcttggtggttggttgtggttagttgttgttgttcatggtttgt
taagaagtcacatgcaaagaagaaagaagaagaaggaagaagaaggaaga
agaaggaagaagaagaggaggaggaggagg
gaattcctcagttgctttttagctccacggccctggttgtcagagctcag
aaatgtacggcacgagtgaatgcttcctgctactttgtggtttgcagcag
atgtgactagcaggtcttcgtggtatttctgaagacagtcaaactgaagt
tgagcctggtgggtaacccagtccccaaacatgaactgtggtcggcggag
accatgctcccatggcgggccacgggaaaagctggggcttttcctcctga
tacattcgtgcttcctcgtggctcacactgtagctgaagcagaagtaagg
aaacacttcaaatctcaccccagcctctgagtctgggaaggaacctgtta
tataggcttcccttttgtagtttcttaaaaagaaaacaaaggaaaacaaa
aatacaagccgaaaccttcctcccaaacccaaaatacatcctccccgcaa
cctaacattcaagggaaactgattaatatacagacaatgactgcacttcc
ctagtccatgttgggatcttaattcttcagggctgtagagttggtgaagt
gaggccttgtgagaggtgtttgggtcaaggagcagggtgttcatgagtgg
gacagttgccctaaaggccttcatctctttcttcttgcacactctatgac
ttttcccttccctctccatcatctgctaagcagcaggaggcacttgcttt
cctctccagacctgtgagccaaaattaaccttaattcaatgtcaccttgg
ggttttgtttaagccagaatgtggactaagagatggctgagggtgtggcc
atggtggatggcagtgccccaactgtggtcaaaaagaaggaccctggggc
aatgcatggtggattgtggattctcatcccccttgaagcatcagcacatc
cagcaagagggatgagagacacatacatctcgccatctataatgtacaag
gtacacacagagctgcactctagctgtggatctgagagagctgcaaaaga
ctctgagcagtgaatgtgtctgagaccaacaaaaagtctcatctttttat
aagactattgtttgtaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_25421240_25421278
seq2: B6Ng01-318C12.b_185_221 (reverse)

seq1  CTTCCTCCTCCTCCTCTTCTTCTTCCTCCTCTTCCTCCT  39
      | |||||||||||||||||||||||||  ||||| ||||
seq2  CCTCCTCCTCCTCCTCTTCTTCTTCCT--TCTTCTTCCT  37

seq1: chr11_63034407_63035478
seq2: B6Ng01-318C12.g_67_1135

seq1  GAATTCCTCAGTTGCTTTTTAGCTCCACGGCCCTGGTTGTCAGAGCTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGTTGCTTTTTAGCTCCACGGCCCTGGTTGTCAGAGCTCAG  50

seq1  AAATGTACGGCACGAGTGAATGCTTCCTGCTACTTTGTGGTTTGCAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACGGCACGAGTGAATGCTTCCTGCTACTTTGTGGTTTGCAGCAG  100

seq1  ATGTGACTAGCAGGTCTTCGTGGTATTTCTGAAGACAGTCAAACTGAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTAGCAGGTCTTCGTGGTATTTCTGAAGACAGTCAAACTGAAGT  150

seq1  TGAGCCTGGTGGGTAACCCAGTCCCCAAACATGAACTGTGGTCGGCGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTGGTGGGTAACCCAGTCCCCAAACATGAACTGTGGTCGGCGGAG  200

seq1  ACCATGCTCCCATGGCGGGCCACGGGAAAAGCTGGGGCTTTTCCTCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCTCCCATGGCGGGCCACGGGAAAAGCTGGGGCTTTTCCTCCTGA  250

seq1  TACATTCGTGCTTCCTCGTGGCTCACACTGTAGCTGAAGCAGAAGTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCGTGCTTCCTCGTGGCTCACACTGTAGCTGAAGCAGAAGTAAGG  300

seq1  AAACACTTCAAATCTCACCCCAGCCTCTGAGTCTGGGAAGGAACCTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTTCAAATCTCACCCCAGCCTCTGAGTCTGGGAAGGAACCTGTTA  350

seq1  TATAGGCTTCCCTTTTGTAGTTTCTTAAAAAGAAAACAAAGGAAAACAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGCTTCCCTTTTGTAGTTTCTTAAAAAGAAAACAAAGGAAAACAAA  400

seq1  AATACAAGCCGAAACCTTCCTCCCAAACCCAAAATACATCCTCCCCGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAGCCGAAACCTTCCTCCCAAACCCAAAATACATCCTCCCCGCAA  450

seq1  CCTAACATTCAAGGGAAACTGATTAATATACAGACAATGACTGCACTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACATTCAAGGGAAACTGATTAATATACAGACAATGACTGCACTTCC  500

seq1  CTAGTCCATGTTGGGATCTTAATTCTTCAGGGCTGTAGAGTTGGTGAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCCATGTTGGGATCTTAATTCTTCAGGGCTGTAGAGTTGGTGAAGT  550

seq1  GAGGCCTTGTGAGAGGTGTTTGGGTCAAGGAGCAGGGTGTTCATGAGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCTTGTGAGAGGTGTTTGGGTCAAGGAGCAGGGTGTTCATGAGTGG  600

seq1  GACAGTTGCCCTAAAGGCCTTCATCTCTTTCTTCTTGCACACTCTATGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTGCCCTAAAGGCCTTCATCTCTTTCTTCTTGCACACTCTATGAC  650

seq1  TTTTCCCTTCCCTCTCCATCATCTGCTAAGCAGCAGGAGGCACTTGCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCTTCCCTCTCCATCATCTGCTAAGCAGCAGGAGGCACTTGCTTT  700

seq1  CCTCTCCAGACCTGTGAGCCAAAATTAACCTTAATTCAATGTCACCTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCAGACCTGTGAGCCAAAATTAACCTTAATTCAATGTCACCTTGG  750

seq1  GGTTTTGTTTAAGCCAGAATGTGGACTAAGAGATGGCTGAGGGTGTGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTTTAAGCCAGAATGTGGACTAAGAGATGGCTGAGGGTGTGGCC  800

seq1  ATGGTGGATGGCAGTGCCCCAACTGTGGTCAAAAAGAAGGACCCTGGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGATGGCAGTGCCCCAACTGTGGTCAAAAAGAAGGACCCTGGGGC  850

seq1  AATGCATGGTGGATTGTGGATTCTCATCCCCCTTGAAGCATCAGCACATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATGGTGGATTGTGGATTCTCATCCCCCTTGAAGCATCAGCACATC  900

seq1  CAGCAAGAGGGATGAGAGACACATACATCTCGCCATCTATAATGTACAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGAGGGATGAGAGACACATACATCTCGCCATCTATAATGTACAAG  950

seq1  GTACACACAGGAGCTGCACTCTAGCTGTGGATCTGAGAGAGGCTGCAAAA  1000
      ||||||||| |||||||||||||||||||||||||||||| |||||||||
seq2  GTACACACA-GAGCTGCACTCTAGCTGTGGATCTGAGAGA-GCTGCAAAA  998

seq1  GACTCTGAGCAGTGAATGTGTCTGAGACCAACAAAAAGTCCTCATC-TTT  1049
      ||||||||||||||||||||||||||||||||||||||| |||||| |||
seq2  GACTCTGAGCAGTGAATGTGTCTGAGACCAACAAAAAGT-CTCATCTTTT  1047

seq1  TATAAGACTAATGGTTTGTAAAA  1072
      ||||||||| || ||||||||||
seq2  TATAAGACT-ATTGTTTGTAAAA  1069