BAC Information

Click to search

BAC

Clone NameB6Ng01-318G01
Chromosome11 (Build37)
Map Location 92,410,643 - 92,614,406
singlet/doubletdoublet
Overlap genenone
Upstream geneKif2b
Downstream geneLOC382545, LOC100039286, Car10, LOC629636
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-318G01.bB6Ng01-318G01.g
ACCGA108284GA108285
length1,134971
definitionB6Ng01-318G01.b B6Ng01-318G01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,613,283 - 92,614,406)(92,410,643 - 92,411,608)
sequence
gaattcactttgtagaccaggctggcctggaactcagagatctgcctgcc
tctgcctcccgagtgctgctatgtctgatttttggcaggtgtaagcttat
gtagtccttgtacaaacaaacacagccactgtgaattcatgagtatcagt
ggagcaaagtatgaagaaggcagtggaagtactgacacattccctgcaaa
aggaagccaagggctgtttttcctccaatggcccgttggaatgtattgtc
catattaatgctcagttttgcaaattgttactttccagaaatgctcttac
aagcatgcctaaaggaaatgtccttatggcatgcctacaggcatttccta
gggtggtcctaaatcttgtcaatttgaaaacttaaaatcaactattagaa
taattgtggtgtgttcagccctaattgaggcattatagtatgccactgat
tcatgggtttttagaactagaggttaatgaggacttctatgaagcatgtc
tatggatacaagattatgattctcatgaatacacagcagctgtggttgtt
tgcacaagaacttcataagctcaatccaggcaaaaatccagtaagatgga
gtagaggctctggaagtcctaaccctagctgaggaattttgacagttcaa
ggctactgggataggaagtcagtcttcttcagagacatatgatctatcag
gttgcccatgctccaagggaccacacaggatacgaatcagggggttacaa
gaagaaggcaagaagtttggggttgaatatgtgtccatgagtctggttca
gtaccctcaggagtgagaggtgcctgatagatcacctatctggacttaca
ggcaattgtgatcctcccaattttggtaccagtaatcaaactttggtctt
ctgcaagagtggtaagtgcttttaacttgtgtgccatgtctccctgtccc
aaatgggttttattcaagtgcagaaaataataatttcatcttcatttatt
tggttttaaaaaaatagaaaaatggtagtagtgtaaaaaataaggatcaa
cattagaataatcatgaccagcctatgaaacatggatactttatactaca
cccttgccataattgcttaatgttaagttccaaa
gaattcagtctttttttgagtgaggagatgttggaatgtattgccttggg
aaggcattgtcttgaatgtgtgtttggtaagaagcagttagattgaagca
gtattttagaaaataaatcacaaccacttcccactagaagaagaacgtat
actatcagctacatgaaatttaaaatgatgtggaatctttgtaacctcta
ctgatagaatattttctaacctgtatttccatggaaacaaagagggaaca
gtaccatcaattggagagagttggtagggaaggaacctttagcacatatg
ctacattgagctgatattaacagagcccaaggaccaacaattaagttctg
catccaataagtcattcagccttagttctcatgctgctcctattacaagg
ggccaaatgccacattgctgcacgttatgcctgtatctatcagttactct
tggtatctaccatgcactaaaatttccaacactacagcttacatttcctt
tgctaatgaagccatgcatttcttcccaaattcttcctctgggacctttg
atattcacactcagtgattgtgattcccttgtttccaaagccttttcttc
aaggactcccagtatcttctttaagtaacttaaatatagttttccttcca
agtaaaattgtagttttcacactcttaggaatctcaggatgtaaaggaaa
attcaagttcctccaaatttctgtatgatgctcccagaaagtacagtctc
tgcctctgaacttcagatcaagacatcgttcagccttcaatgggagaagc
ttctcgttcacagtagatgataaataatacagaaagaccacacaacatgc
agagattaggagactttgggagtactttttctcttaatggaaacatgtat
taaacaccctttctctccagggtcagataggcagaaaaagggggggggga
ttccccaggagaaaaggaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_92613283_92614406
seq2: B6Ng01-318G01.b_43_1176 (reverse)

seq1  TTTGGAA--TTACATTAAGCAATTATGCAAAGGTTGTAGTAT-AAGTATC  47
      |||||||  | ||||||||||||||||  |||| |||||||| |||||||
seq2  TTTGGAACTTAACATTAAGCAATTATGGCAAGGGTGTAGTATAAAGTATC  50

seq1  AATTGTTTCATA-GCTGGTCATGATTATTCTAATTGTTGAT-CTTATTTT  95
       | ||||||||| |||||||||||||||||||| ||||||| ||||||||
seq2  CA-TGTTTCATAGGCTGGTCATGATTATTCTAA-TGTTGATCCTTATTTT  98

seq1  TTACACTTACTAC--ATTTTCTA--TTTTTAAAACCAAATAAATGAAGAT  141
      |||||| ||||||   |||||||  |||||||||||||||||||||||||
seq2  TTACAC-TACTACCATTTTTCTATTTTTTTAAAACCAAATAAATGAAGAT  147

seq1  G-AATTAT--ATTTCTGCACTTGAATAAAA-CCATTTGGGACAGGGAGAC  187
      | ||||||   ||||||||||||||||||| |||||||||||||||||||
seq2  GAAATTATTATTTTCTGCACTTGAATAAAACCCATTTGGGACAGGGAGAC  197

seq1  ATGGCACACAAGTTAAAAGCACTTACCACTCTTGCAGAAGACCAAAGTTT  237
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACACAAGTTAAAAGCACTTACCACTCTTGCAGAAGACCAAAGTTT  247

seq1  GATTACTGGTACCAAAATTGGGAGGATCACAATTGCCTGTAAGTCCAGAT  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTGGTACCAAAATTGGGAGGATCACAATTGCCTGTAAGTCCAGAT  297

seq1  AGGTGATCTATCAGGCACCTCTCACTCCTGAGGGTACTGAACCAGACTCA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGATCTATCAGGCACCTCTCACTCCTGAGGGTACTGAACCAGACTCA  347

seq1  TGGACACATATTCAACCCCAAACTTCTTGCCTTCTTCTTGTAACCCCCTG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACATATTCAACCCCAAACTTCTTGCCTTCTTCTTGTAACCCCCTG  397

seq1  ATTCGTATCCTGTGTGGTCCCTTGGAGCATGGGCAACCTGATAGATCATA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGTATCCTGTGTGGTCCCTTGGAGCATGGGCAACCTGATAGATCATA  447

seq1  TGTCTCTGAAGAAGACTGACTTCCTATCCCAGTAGCCTTGAACTGTCAAA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGAAGAAGACTGACTTCCTATCCCAGTAGCCTTGAACTGTCAAA  497

seq1  ATTCCTCAGCTAGGGTTAGGACTTCCAGAGCCTCTACTCCATCTTACTGG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCAGCTAGGGTTAGGACTTCCAGAGCCTCTACTCCATCTTACTGG  547

seq1  ATTTTTGCCTGGATTGAGCTTATGAAGTTCTTGTGCAAACAACCACAGCT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGCCTGGATTGAGCTTATGAAGTTCTTGTGCAAACAACCACAGCT  597

seq1  GCTGTGTATTCATGAGAATCATAATCTTGTATCCATAGACATGCTTCATA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTATTCATGAGAATCATAATCTTGTATCCATAGACATGCTTCATA  647

seq1  GAAGTCCTCATTAACCTCTAGTTCTAAAAACCCATGAATCAGTGGCATAC  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCTCATTAACCTCTAGTTCTAAAAACCCATGAATCAGTGGCATAC  697

seq1  TATAATGCCTCAATTAGGGCTGAACACACCACAATTATTCTAATAGTTGA  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGCCTCAATTAGGGCTGAACACACCACAATTATTCTAATAGTTGA  747

seq1  TTTTAAGTTTTCAAATTGACAAGATTTAGGACCACCCTAGGAAATGCCTG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGTTTTCAAATTGACAAGATTTAGGACCACCCTAGGAAATGCCTG  797

seq1  TAGGCATGCCATAAGGACATTTCCTTTAGGCATGCTTGTAAGAGCATTTC  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATGCCATAAGGACATTTCCTTTAGGCATGCTTGTAAGAGCATTTC  847

seq1  TGGAAAGTAACAATTTGCAAAACTGAGCATTAATATGGACAATACATTCC  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGTAACAATTTGCAAAACTGAGCATTAATATGGACAATACATTCC  897

seq1  AACGGGCCATTGGAGGAAAAACAGCCCTTGGCTTCCTTTTGCAGGGAATG  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGGCCATTGGAGGAAAAACAGCCCTTGGCTTCCTTTTGCAGGGAATG  947

seq1  TGTCAGTACTTCCACTGCCTTCTTCATACTTTGCTCCACTGATACTCATG  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTACTTCCACTGCCTTCTTCATACTTTGCTCCACTGATACTCATG  997

seq1  AATTCACAGTGGCTGTGTTTGTTTGTACAAGGACTACATAAGCTTACACC  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACAGTGGCTGTGTTTGTTTGTACAAGGACTACATAAGCTTACACC  1047

seq1  TGCCAAAAATCAGACATAGCAGCACTCGGGAGGCAGAGGCAGGCAGATCT  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAAATCAGACATAGCAGCACTCGGGAGGCAGAGGCAGGCAGATCT  1097

seq1  CTGAGTTCCAGGCCAGCCTGGTCTACAAAGTGAATTC  1124
      |||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCCAGGCCAGCCTGGTCTACAAAGTGAATTC  1134

seq1: chr11_92410643_92411608
seq2: B6Ng01-318G01.g_69_1039

seq1  GAATTCAGTCTTTTTTTGAGTGAGGAGATGTTGGAATGTATTGCCTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTTTTTTTGAGTGAGGAGATGTTGGAATGTATTGCCTTGGG  50

seq1  AAGGCATTGTCTTGAATGTGTGTTTGGTAAGAAGCAGTTAGATTGAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTGTCTTGAATGTGTGTTTGGTAAGAAGCAGTTAGATTGAAGCA  100

seq1  GTATTTTAGAAAATAAATCACAACCACTTCCCACTAGAAGAAGAACGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAGAAAATAAATCACAACCACTTCCCACTAGAAGAAGAACGTAT  150

seq1  ACTATCAGCTACATGAAATTTAAAATGATGTGGAATCTTTGTAACCTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCAGCTACATGAAATTTAAAATGATGTGGAATCTTTGTAACCTCTA  200

seq1  CTGATAGAATATTTTCTAACCTGTATTTCCATGGAAACAAAGAGGGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAGAATATTTTCTAACCTGTATTTCCATGGAAACAAAGAGGGAACA  250

seq1  GTACCATCAATTGGAGAGAGTTGGTAGGGAAGGAACCTTTAGCACATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCAATTGGAGAGAGTTGGTAGGGAAGGAACCTTTAGCACATATG  300

seq1  CTACATTGAGCTGATATTAACAGAGCCCAAGGACCAACAATTAAGTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTGAGCTGATATTAACAGAGCCCAAGGACCAACAATTAAGTTCTG  350

seq1  CATCCAATAAGTCATTCAGCCTTAGTTCTCATGCTGCTCCTATTACAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAATAAGTCATTCAGCCTTAGTTCTCATGCTGCTCCTATTACAAGG  400

seq1  GGCCAAATGCCACATTGCTGCACGTTATGCCTGTATCTATCAGTTACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAATGCCACATTGCTGCACGTTATGCCTGTATCTATCAGTTACTCT  450

seq1  TGGTATCTACCATGCACTAAAATTTCCAACACTACAGCTTACATTTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATCTACCATGCACTAAAATTTCCAACACTACAGCTTACATTTCCTT  500

seq1  TGCTAATGAAGCCATGCATTTCTTCCCAAATTCTTCCTCTGGGACCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAATGAAGCCATGCATTTCTTCCCAAATTCTTCCTCTGGGACCTTTG  550

seq1  ATATTCACACTCAGTGATTGTGATTCCCTTGTTTCCAAAGCCTTTTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACACTCAGTGATTGTGATTCCCTTGTTTCCAAAGCCTTTTCTTC  600

seq1  AAGGACTCCCAGTATCTTCTTTAAGTAACTTAAATATAGTTTTCCTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTCCCAGTATCTTCTTTAAGTAACTTAAATATAGTTTTCCTTCCA  650

seq1  AGTAAAATTGTAGTTTTCACACTCTTAGGAATCTCAGGATGTAAAGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATTGTAGTTTTCACACTCTTAGGAATCTCAGGATGTAAAGGAAA  700

seq1  ATTCAAGTTCCTCCAAATTTCTGTATGATGCTCCCAGAAAGTACAGTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTTCCTCCAAATTTCTGTATGATGCTCCCAGAAAGTACAGTCTC  750

seq1  TGCCTCTGAACTTCAGATCAAGACATCGTTCAGCCTTCAAT-GGAGAAGC  799
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGCCTCTGAACTTCAGATCAAGACATCGTTCAGCCTTCAATGGGAGAAGC  800

seq1  TTCTCG-TCACAGTAGATGATAAATAATACAG-AAGACCACACAACATGC  847
      |||||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  TTCTCGTTCACAGTAGATGATAAATAATACAGAAAGACCACACAACATGC  850

seq1  AGAGATTAGGAGACTTT-GGAGTAC-TTTTCTCTTAATGG-AACATGTAT  894
      ||||||||||||||||| ||||||| |||||||||||||| |||||||||
seq2  AGAGATTAGGAGACTTTGGGAGTACTTTTTCTCTTAATGGAAACATGTAT  900

seq1  AAAACACCC-TTCTCTCCAAGGGTCAGATAGGCAGAAAAAGGGGGGGGGG  943
       |||||||| |||||||| |||||||||||||||||||||||||||||||
seq2  TAAACACCCTTTCTCTCC-AGGGTCAGATAGGCAGAAAAAGGGGGGGGGG  949

seq1  ATTCCCCAAGGAGAAAAGGAAGT  966
      ||||||| |||||||||||||||
seq2  ATTCCCC-AGGAGAAAAGGAAGT  971