BAC Information

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BAC

Clone NameB6Ng01-323D12
Chromosome11 (Build37)8 (Build37)
Map Location 66,717,546 - 66,717,64390,572,014 - 90,573,101
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneDnahc9, Gm879, LOC668323
Downstream geneA530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13, Gas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-323D12.bB6Ng01-323D12.g
ACCGA111857GA111858
length1141,085
definitionB6Ng01-323D12.b B6Ng01-323D12.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(66,717,546 - 66,717,643)(90,572,014 - 90,573,101)
sequence
gaattcaggtgtcgccgggcagtggtggcacacgcctttaatcccagcac
ttgggaggcagaggcggcgatttctgacttggaggccagcctggtctaca
gagtgagttccatg
gaattctttggaaaagtcagttgtgttggaaggtgaaagagttgtgttgg
aacatgaaagagcgttttcctgaagtggacacagatgaaagactaaggca
gacttgtgaaggaatgtttcactgaagcagacacgggaggaaggatgttc
tgctaaaacaagcatgtgaaaggacacgtgatgaaggattcttcgctaac
aacgcgcatgtactggtttgcttcacgttgcacagctcagcatcctctgt
tcatcataacctgcatgggatccctctgtgacttgccaaggatcctgaaa
caagcactagacattggggcagcgacctggggctttctcctaataatgac
aaacataggtcacacatcacggagcctcacgcacctccattacctccatt
cacttcatgcaggaacagacagttaccacacataggggttggtgcggaaa
gctagccaggatgacttgatgccagaacatatgtggtcaggcttcagata
ggcctcctcccagaaggaagagatgggtctgatctgcaacaggatgcagt
cagactgaggtgtagtccctgcctctggtttccagtcacgagagcttttg
agtctttgtgttagagcaatctggagcagaccctgtcacatcagaaaagg
gaatggcagggctggagagatgactccatgcctaagaggacctgttgttg
ctcttataatagacccagagggggttcccagcacgcacctgatgtctaac
cactgtcaggaactccagatccgggtggatgggatgtcttcttctaacac
cttagccaacaccagagtacacatggtgcacatacatacatgtctgcaaa
acaatcgtacataaataaaattgataagacctcaaaaaaaaagctacagt
aatgtcactttagaagactgccatcattcagaaataacagtataaaaatg
ttgaatttagggtagggattgtgagacccagtttaaacaagcttcttagc
caagcctcaagctcagcagagggtttcttcaggttcttgttctcactgtg
gagaaatctaagcacattcctggtcccctggagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_66717546_66717643
seq2: B6Ng01-323D12.b_59_154

seq1  GGGCAGTGGTGACACACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCA  50
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  GGGCAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGC-  49

seq1  GGCGGATTTCTGAGTCTGAGACCAGCCTGGTCTACAGAGTGAGTTCCA  98
      ||| ||||||||| |  ||| |||||||||||||||||||||||||||
seq2  GGC-GATTTCTGACTTGGAGGCCAGCCTGGTCTACAGAGTGAGTTCCA  96

seq1: chr8_90572014_90573101
seq2: B6Ng01-323D12.g_67_1151

seq1  GAATTCTTTGGAAAAGTCAGTTGTGTTGGAAGGTGAAAGAGTTGTGTTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGAAAAGTCAGTTGTGTTGGAAGGTGAAAGAGTTGTGTTGG  50

seq1  AACATGAAAGAGCGTTTTCCTGAAGTGGACACAGATGAAAGACTAAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAAGAGCGTTTTCCTGAAGTGGACACAGATGAAAGACTAAGGCA  100

seq1  GACTTGTGAAGGAATGTTTCACTGAAGCAGACACGGGAGGAAGGATGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTGAAGGAATGTTTCACTGAAGCAGACACGGGAGGAAGGATGTTC  150

seq1  TGCTAAAACAAGCATGTGAAAGGACACGTGATGAAGGATTCTTCGCTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAAACAAGCATGTGAAAGGACACGTGATGAAGGATTCTTCGCTAAC  200

seq1  AACGCGCATGTACTGGTTTGCTTCACGTTGCACAGCTCAGCATCCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCGCATGTACTGGTTTGCTTCACGTTGCACAGCTCAGCATCCTCTGT  250

seq1  TCATCATAACCTGCATGGGATCCCTCTGTGACTTGCCAAGGATCCTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATAACCTGCATGGGATCCCTCTGTGACTTGCCAAGGATCCTGAAA  300

seq1  CAAGCACTAGACATTGGGGCAGCGACCTGGGGCTTTCTCCTAATAATGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCACTAGACATTGGGGCAGCGACCTGGGGCTTTCTCCTAATAATGAC  350

seq1  AAACATAGGTCACACATCACGGAGCCTCACGCACCTCCATTACCTCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGGTCACACATCACGGAGCCTCACGCACCTCCATTACCTCCATT  400

seq1  CACTTCATGCAGGAACAGACAGTTACCACACATAGGGGTTGGTGCGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCATGCAGGAACAGACAGTTACCACACATAGGGGTTGGTGCGGAAA  450

seq1  GCTAGCCAGGATGACTTGATGCCAGAACATATGTGGTCAGGCTTCAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCCAGGATGACTTGATGCCAGAACATATGTGGTCAGGCTTCAGATA  500

seq1  GGCCTCCTCCCAGAAGGAAGAGATGGGTCTGATCTGCAACAGGATGCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCTCCCAGAAGGAAGAGATGGGTCTGATCTGCAACAGGATGCAGT  550

seq1  CAGACTGAGGTGTAGTCCCTGCCTCTGGTTTCCAGTCACGAGAGCTTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGAGGTGTAGTCCCTGCCTCTGGTTTCCAGTCACGAGAGCTTTTG  600

seq1  AGTCTTTGTGTTAGAGCAATCTGGAGCAGACCCTGTCACATCAGAAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTGTGTTAGAGCAATCTGGAGCAGACCCTGTCACATCAGAAAAGG  650

seq1  GAATGGCAGGGCTGGAGAGATGACTCCATGCCTAAGAGGACCTGTTGTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCAGGGCTGGAGAGATGACTCCATGCCTAAGAGGACCTGTTGTTG  700

seq1  CTCTTATAATAGACCCAGAGGGGGTTCCCAGCACGCACCTGATGTCTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTATAATAGACCCAGAGGGGGTTCCCAGCACGCACCTGATGTCTAAC  750

seq1  CACTGTCAGGAACTCCAGATCCGGGTGGATGGGATGTCTTCTTCTAACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCAGGAACTCCAGATCCGGGTGGATGGGATGTCTTCTTCTAACAC  800

seq1  CTTAGCCAACACCAGAGTACACATGGTGCACATACATACATGTCTGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCAACACCAGAGTACACATGGTGCACATACATACATGTCTGCAAA  850

seq1  ACAATCGTACATAAATAAAATTGATAAGACCTCAAAAAAAAAGCTACAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCGTACATAAATAAAATTGATAAGACCTCAAAAAAAAAGCTACAGT  900

seq1  AATGTCACTTTAGAAGACTGCCATCATTCAGAAATAACAGTATTAAAAAT  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATGTCACTTTAGAAGACTGCCATCATTCAGAAATAACAGTA-TAAAAAT  949

seq1  GTTGAATTTAGGGTAGGGATTGTGAGAACCCAGTTTAAAC-AGCT--CTA  997
      |||||||||||||||||||||||||| ||||||||||||| ||||   ||
seq2  GTTGAATTTAGGGTAGGGATTGTGAG-ACCCAGTTTAAACAAGCTTCTTA  998

seq1  GCCAAGGCCTCAAAGCTCAGCAGAGGGGTTTCTCCAAGTTCCTGTATCTC  1047
      ||||| ||||| |||||||||||| |||||||| || |||| ||| ||||
seq2  GCCAA-GCCTC-AAGCTCAGCAGA-GGGTTTCTTCAGGTTCTTGT-TCTC  1044

seq1  ACTGTGGAGGAAATCTAAAGCACATT-CTGGTCCCCT-GAGAC  1088
      |||||||| ||||||| ||||||||| |||||||||| |||||
seq2  ACTGTGGA-GAAATCT-AAGCACATTCCTGGTCCCCTGGAGAC  1085