BAC Information

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BAC

Clone NameB6Ng01-326E06
Chromosome11 (Build37)
Map Location 78,729,013 - 78,883,371
singlet/doubletdoublet
Overlap geneNos2, Lgals9, Ksr1
Upstream geneSez6, LOC100043518, Phf12, Dhrs13, Flot2, Eral1, BC017647, LOC100043525, Traf4, Nek8, Tlcd1, Rpl23a, Rab34, 4933404M19Rik, Supt6h, Sdf2, 2610507B11Rik, BC030499, LOC100043544, LOC100042648, Spag5, Aldoc, Pigs, Unc119, Foxn1, OTTMUSG00000000132, Slc13a2, Slc46a1, A830091I15Rik, Vtn, Og9x, AI316787, Poldip2, Tnfaip1, Ift20, Tmem97, Nlk, LOC100043570, LOC100042674, 1810009O10Rik, 1810012P15Rik
Downstream geneLOC100042697, Wsb1, Nf1, Omg, Evi2b, Evi2a, Rab11fip4, OTTMUSG00000000185, LOC432584, Utp6, ENSMUSG00000072631, Suz12, Crlf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-326E06.bB6Ng01-326E06.g
ACCGA114118GA114119
length5491,045
definitionB6Ng01-326E06.b B6Ng01-326E06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,882,817 - 78,883,371)(78,729,013 - 78,730,034)
sequence
tgcatgatgtcagtcttattctcgcctttgtgtaaatccagaaaatccac
ctcattcttttagagcacaatagtgagagaattcttcaggatgtctgaca
gtgggccggggatgcagctcagtgataggtagggggctgttccctagaaa
gagcagctggcaaagctaaagggacagctagcctgctgcggtaggaacag
agacatcctttctccccctactcccccctcccccccccccgcctctgaga
gacctcccccagacatacacacactgagtccctcaacacctgaagaaagg
aaggaagggagggagggaggaagagatcctccattatgaatgattgtgtt
tggatgagaccacttgcttacacaagtgctcactgtgacttcagcatatg
aataaatctgtgagcctgtgcccacagaagccacatgtacctgaaaaagc
tctgtacctacctagccccggggcacctagcaggtgggaagcctttggca
agccttttctggtccaagggtggtagaaatggataacaatcagtgtgga
gaattccctgacatcggagctgtggcatattcatccgtggtctgtgagcc
acgatcctctgtgttcctccctcctgaaaactgggacaataacatagcct
taccggttgtcctgagactgggcgtcatgccatggtcatgcagtgtgttg
ttgatcctgggtgttgttcaagctgaagaccgctagagccacaggaaaac
cacatgaccatggcagatgctcctcccctgggagcctgcatagaggaggc
agaaagcctgcatagatgaggctgacctgccttccagtatcactatgaag
atttgaggatatgaccatgctgagtgggtctttacaggcttcccataaat
acacacatagttctaggttcgaaacctggatctgctccttcaccctcagg
gactcagtccttacttgtctgggagtgcagcatcctctgcaaattgaaag
taggagtagtactttgccaaggcagactcttggtgacagcgcctttgtct
cccctaccctcaactggataagaactctgcctgcctgcatctcctcctac
agtgtcacaccacagagctgccaccaatggggggcgttaagcagatccac
tcagctgtcaccaatccctcagttccaccgtggactgagtccttctgctg
tgtgccttcctgcagtgaagtgggcacaccaatcagggagtcctctgggg
tgcagcaaggaccttaggtctcagatctgagtcaagcctcaactctacca
ctataagctaagtttgctgggctgggggcacactttttcagtgtcacttt
tgtttatgaaatcaggggaacagggcagagcgtttcatcaatgagtggaa
agccaggctttggctatattcacttgggtgagtactcagggcatggagct
tgtaattgggcatagctgggggcttatgccaagagatgcagtttgagggg
gtgcccagggtgttatgcctccgaaacccaagcttgcctttcaggtcttt
gttcctgttcctcctcagaaataagcatggagaagatggggagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_78882817_78883371
seq2: B6Ng01-326E06.b_49_603 (reverse)

seq1  TCCCCACTGATTGTTATCCATTTCTACCACCCTTGGACCAGAAAAGGCTT  50
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTGATTGTTATCCATTTCTACCACCCTTGGACCAGAAAAGGCTT  50

seq1  GCCAAAGGCTTCCCACCTGCTAGGTGCCCCGGGGCTAGGTAGGTACAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAGGCTTCCCACCTGCTAGGTGCCCCGGGGCTAGGTAGGTACAGAG  100

seq1  CTTTTTCAGGTACATGTGGCTTCTGTGGGCACAGGCTCACAGATTTATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCAGGTACATGTGGCTTCTGTGGGCACAGGCTCACAGATTTATTC  150

seq1  ATATGCTGAAGTCACAGTGAGCACTTGTGTAAGCAAGTGGTCTCATCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTGAAGTCACAGTGAGCACTTGTGTAAGCAAGTGGTCTCATCCAA  200

seq1  ACACAATCATTCATAATGGAGGATCTCTTCCTCCCTCCCTCCCTTCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATCATTCATAATGGAGGATCTCTTCCTCCCTCCCTCCCTTCCTTC  250

seq1  CTTTCTTCAGGTGTTGAGGGACTCAGTGTGTGTATGTCTGGGGGAGGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCAGGTGTTGAGGGACTCAGTGTGTGTATGTCTGGGGGAGGTCT  300

seq1  CTCAGAGGCGGGGGGGGGGGAGGGGGGAGTAGGGGGAGAAAGGATGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGGCGGGGGGGGGGGAGGGGGGAGTAGGGGGAGAAAGGATGTCTC  350

seq1  TGTTCCTACCGCAGCAGGCTAGCTGTCCCTTTAGCTTTGCCAGCTGCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTACCGCAGCAGGCTAGCTGTCCCTTTAGCTTTGCCAGCTGCTCT  400

seq1  TTCTAGGGAACAGCCCCCTACCTATCACTGAGCTGCATCCCCGGCCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGGAACAGCCCCCTACCTATCACTGAGCTGCATCCCCGGCCCACT  450

seq1  GTCAGACATCCTGAAGAATTCTCTCACTATTGTGCTCTAAAAGAATGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACATCCTGAAGAATTCTCTCACTATTGTGCTCTAAAAGAATGAGG  500

seq1  TGGATTTTCTGGATTTACACAAAGGCGAGAATAAGACTGACATCATGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTTCTGGATTTACACAAAGGCGAGAATAAGACTGACATCATGCAG  550

seq1  AATTC  555
      |||||
seq2  AATTC  555

seq1: chr11_78729013_78730034
seq2: B6Ng01-326E06.g_67_1111

seq1  GAATTCCCTGACATCGGAGCTGTGGCATATTCATCCGTGGTCTGTGAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGACATCGGAGCTGTGGCATATTCATCCGTGGTCTGTGAGCC  50

seq1  ACGATCCTCTGTGTTCCTCCCTCCTGAAAACTGGGACAATAACATAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATCCTCTGTGTTCCTCCCTCCTGAAAACTGGGACAATAACATAGCCT  100

seq1  TACCGGTTGTCCTGAGACTGGGCGTCATGCCATGGTCATGCAGTGTGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCGGTTGTCCTGAGACTGGGCGTCATGCCATGGTCATGCAGTGTGTTG  150

seq1  TTGATCCTGGGTGTTGTTCAAGCTGAAGACCGCTAGAGCCACAGGAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCCTGGGTGTTGTTCAAGCTGAAGACCGCTAGAGCCACAGGAAAAC  200

seq1  CACATGACCATGGCAGATGCTCCTCCCCTGGGAGCCTGCATAGAGGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGACCATGGCAGATGCTCCTCCCCTGGGAGCCTGCATAGAGGAGGC  250

seq1  AGAAAGCCTGCATAGATGAGGCTGACCTGCCTTCCAGTATCACTATGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCCTGCATAGATGAGGCTGACCTGCCTTCCAGTATCACTATGAAG  300

seq1  ATTTGAGGATATGACCATGCTGAGTGGGTCTTTACAGGCTTCCCATAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGGATATGACCATGCTGAGTGGGTCTTTACAGGCTTCCCATAAAT  350

seq1  ACACACATAGTTCTAGGTTCGAAACCTGGATCTGCTCCTTCACCCTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATAGTTCTAGGTTCGAAACCTGGATCTGCTCCTTCACCCTCAGG  400

seq1  GACTCAGTCCTTACTTGTCTGGGAGTGCAGCATCCTCTGCAAATTGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGTCCTTACTTGTCTGGGAGTGCAGCATCCTCTGCAAATTGAAAG  450

seq1  TAGGAGTAGTACTTTGCCAAGGCAGACTCTTGGTGACAGCGCCTTTGTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGTAGTACTTTGCCAAGGCAGACTCTTGGTGACAGCGCCTTTGTCT  500

seq1  CCCCTACCCTCAACTGGATAAGAACTCTGCCTGCCTGCATCTCCTCCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACCCTCAACTGGATAAGAACTCTGCCTGCCTGCATCTCCTCCTAC  550

seq1  AGTGTCACACCACAGAGCTGCCACCAATGGGGGGCGTTAAGCAGATCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCACACCACAGAGCTGCCACCAATGGGGGGCGTTAAGCAGATCCAC  600

seq1  TCAGCTGTCACCAATCCCTCAGTTCCACCGTGGACTGAGTCCTTCTGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGTCACCAATCCCTCAGTTCCACCGTGGACTGAGTCCTTCTGCTG  650

seq1  TGTGCCTTCCTGCAGTGAAGTGGGCACACCAATCAGGGAGTCCTCTGGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTTCCTGCAGTGAAGTGGGCACACCAATCAGGGAGTCCTCTGGGG  700

seq1  TGCAGCAAGGACCTTAGGTCTCAGATCTGAGTCAAGCCTCAACTCTACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCAAGGACCTTAGGTCTCAGATCTGAGTCAAGCCTCAACTCTACCA  750

seq1  CTATAAGCTAAGTTTGCTGGGCTGGGGGCACAC-TTTTCAGTGTCACTTT  799
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTATAAGCTAAGTTTGCTGGGCTGGGGGCACACTTTTTCAGTGTCACTTT  800

seq1  TGTTTATGAAATCAGGGGAACAGGGCAGAGCG-TTCATCAATGAGTGGAA  848
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTTTATGAAATCAGGGGAACAGGGCAGAGCGTTTCATCAATGAGTGGAA  850

seq1  AGCCAGGC-TTGGCTATATTCACTT-GGTGAGTACTCAGGGCATGGAGCT  896
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  AGCCAGGCTTTGGCTATATTCACTTGGGTGAGTACTCAGGGCATGGAGCT  900

seq1  TGTAATT-GGCATAGCTGGGGGC-TATGCCAAGAGATGCAG-TTGA-GGG  942
      ||||||| ||||||||||||||| ||||||||||||||||| |||| |||
seq2  TGTAATTGGGCATAGCTGGGGGCTTATGCCAAGAGATGCAGTTTGAGGGG  950

seq1  GTG-CCAGGGTG-TAGGCCTC--GAACCCAAGC-TGCC-TTCAGGTCTT-  985
      ||| |||||||| || |||||   ||||||||| |||| |||||||||| 
seq2  GTGCCCAGGGTGTTATGCCTCCGAAACCCAAGCTTGCCTTTCAGGTCTTT  1000

seq1  -GTCCTGT--CT-CTCAG-AATAAGCAT-GAG-AGAT-GGGAGAG  1022
        ||||||  || ||||| ||||||||| ||| |||| |||||||
seq2  GTTCCTGTTCCTCCTCAGAAATAAGCATGGAGAAGATGGGGAGAG  1045