BAC Information

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BAC

Clone NameB6Ng01-335D19
Chromosome11 (Build37)
Map Location 39,070,209 - 39,071,142
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335D19.bB6Ng01-335D19.g
ACCGA120530GA120531
length934582
definitionB6Ng01-335D19.b B6Ng01-335D19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctgtgtagataggcttcaaattctcaaatcaaatcacagagc
tattgatagccaccataatactcatggcattatttcaatagggttggtat
tgtagttcaaatggataaaagcttggtataatcagaaatgattttctacc
taaacatccaacgttgttccatttttcattgtgaaagctaaacagggact
ttttctgtgtacagacgctattggtgcttttgatcactatatacattttt
ttctttctgatcttgttcaaggtagacatggtttattttgttcatactta
gattttctcgttatagcatcactaacattaaaagatgttttcttcacaaa
gagaaggatggcttgttgatctgtggagctttgtccagaaattcttccct
ggtggtgaatgtattttgaggctgtatcttcaaaataaggccctatgtat
aataaattctccttcctcttctctgttattctctgtatctcattccatac
atgttatatctagaaattaagccagttatatcttattatatgcaaaatat
aataatttttatattttaaatacatgcatgtaattagtaaccaacaatga
aaattctattttgtttcaaagactatttctctcttattctctagtctagt
agaaaacaatatttctaatatatttgtttttgtatatgctgtattactga
tcaagtgatatatatgtaatttaaagttatattgaagtatgaatcagaaa
caatctgggttagagtactttatgagtgaaatgtgggttttacacattat
tcagtaaaattacttggaagtcatttttatcttcagtgatgttcaagtct
tgtcctaggtgctgaagtgaattatgtgatatcccatgcagcatgaaatt
tatgggtgtgtgtgtgtgtgtgtgtgtgtgtgtg

gaattcccatcacccattttccaaatttttggttctagaattgttaattc
taaaggaaatgtagggacaaaaatggagcagagactgaagggaaggccat
ccagtgaccagctcaatttagaatccatcccatgagcaggcaccaaaccc
tgaaattattactgatgccatgctgtgcttgcagatggaaacctagcatg
gctgatctatgagaggatctaccagcatctgactgagacaggtgcagata
cttgcagccaaagattgtactgaggtttgggacctctatggaagagttag
gggaaggacagaaggagctgaagggaattgcaatcccataggaagaacaa
cattatcaagtacctcatacccctcgggacatacatggtgtaagccacca
ataaaagtgcatacataggttggtctgtgcccctttgcacatatgtagca
gaggataaccttgtcgagcttcaatgagagtagatgtacttcaatgaaat
ggggtttctatgtaatcccatagaaacttgatgccccagggaagggagat
gctgtttgtgggtgaggttgggatgggtggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_39070209_39071142
seq2: B6Ng01-335D19.b_47_980 (reverse)

seq1  CACACACACACACACACACACACACACACCCATAAATTTCATGCTGCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACCCATAAATTTCATGCTGCATG  50

seq1  GGATATCACATAATTCACTTCAGCACCTAGGACAAGACTTGAACATCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCACATAATTCACTTCAGCACCTAGGACAAGACTTGAACATCACT  100

seq1  GAAGATAAAAATGACTTCCAAGTAATTTTACTGAATAATGTGTAAAACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAAAAATGACTTCCAAGTAATTTTACTGAATAATGTGTAAAACCC  150

seq1  ACATTTCACTCATAAAGTACTCTAACCCAGATTGTTTCTGATTCATACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCACTCATAAAGTACTCTAACCCAGATTGTTTCTGATTCATACTT  200

seq1  CAATATAACTTTAAATTACATATATATCACTTGATCAGTAATACAGCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAACTTTAAATTACATATATATCACTTGATCAGTAATACAGCATA  250

seq1  TACAAAAACAAATATATTAGAAATATTGTTTTCTACTAGACTAGAGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAAACAAATATATTAGAAATATTGTTTTCTACTAGACTAGAGAATA  300

seq1  AGAGAGAAATAGTCTTTGAAACAAAATAGAATTTTCATTGTTGGTTACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAATAGTCTTTGAAACAAAATAGAATTTTCATTGTTGGTTACTA  350

seq1  ATTACATGCATGTATTTAAAATATAAAAATTATTATATTTTGCATATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATGCATGTATTTAAAATATAAAAATTATTATATTTTGCATATAAT  400

seq1  AAGATATAACTGGCTTAATTTCTAGATATAACATGTATGGAATGAGATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATAACTGGCTTAATTTCTAGATATAACATGTATGGAATGAGATAC  450

seq1  AGAGAATAACAGAGAAGAGGAAGGAGAATTTATTATACATAGGGCCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATAACAGAGAAGAGGAAGGAGAATTTATTATACATAGGGCCTTAT  500

seq1  TTTGAAGATACAGCCTCAAAATACATTCACCACCAGGGAAGAATTTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGATACAGCCTCAAAATACATTCACCACCAGGGAAGAATTTCTGG  550

seq1  ACAAAGCTCCACAGATCAACAAGCCATCCTTCTCTTTGTGAAGAAAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCTCCACAGATCAACAAGCCATCCTTCTCTTTGTGAAGAAAACAT  600

seq1  CTTTTAATGTTAGTGATGCTATAACGAGAAAATCTAAGTATGAACAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAATGTTAGTGATGCTATAACGAGAAAATCTAAGTATGAACAAAAT  650

seq1  AAACCATGTCTACCTTGAACAAGATCAGAAAGAAAAAAATGTATATAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATGTCTACCTTGAACAAGATCAGAAAGAAAAAAATGTATATAGTG  700

seq1  ATCAAAAGCACCAATAGCGTCTGTACACAGAAAAAGTCCCTGTTTAGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAAGCACCAATAGCGTCTGTACACAGAAAAAGTCCCTGTTTAGCTT  750

seq1  TCACAATGAAAAATGGAACAACGTTGGATGTTTAGGTAGAAAATCATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATGAAAAATGGAACAACGTTGGATGTTTAGGTAGAAAATCATTTC  800

seq1  TGATTATACCAAGCTTTTATCCATTTGAACTACAATACCAACCCTATTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATACCAAGCTTTTATCCATTTGAACTACAATACCAACCCTATTGA  850

seq1  AATAATGCCATGAGTATTATGGTGGCTATCAATAGCTCTGTGATTTGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGCCATGAGTATTATGGTGGCTATCAATAGCTCTGTGATTTGATT  900

seq1  TGAGAATTTGAAGCCTATCTACACAGGAGAATTC  934
      ||||||||||||||||||||||||||||||||||
seq2  TGAGAATTTGAAGCCTATCTACACAGGAGAATTC  934


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