BAC Information

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BAC

Clone NameB6Ng01-335I22
Chromosome11 (Build37)
Map Location 116,061,606 - 116,061,742
singlet/doubletsinglet
Overlap gene2310004N24Rik
Upstream geneTmem104, Grin2c, Fdxr, Fads6, Otop2, Ush1g, Otop3, C630004H02Rik, Cdr2l, Ict1, Atp5h, Kctd2, 4933422H20Rik, Slc16a5, Armc7, Nt5c, Hn1, Sumo2, Nup85, Gga3, Mrps7, Mif4gd, Slc25a19, Grb2, LOC100043184, 2310067B10Rik, Caskin2, Tsen54, Llgl2, Recql5, 2210020M01Rik, Sap30bp, Itgb4, Galk1, H3f3b, Unk, Unc13d, Wbp2, Trim47, Trim65, Mrpl38, Fbf1, Acox1
Downstream geneCdk3, Evpl, Srp68, Galr2, Exoc7, Foxj1, LOC668255, 1110014K08Rik, Qrich2, Prpsap1, LOC629971, Sphk1, Ube2o, Aanat, Rhbdf2, Cygb, OTTMUSG00000003947, 1810032O08Rik, St6galnac2, LOC634720, BC018473, St6galnac1, Mxra7, Jmjd6, 1110005A03Rik, LOC100043293, Sfrs2, Mfsd11, Mgat5b, LOC100042036, Sec14l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335I22.bB6Ng01-335I22.g
ACCGA120743GA120744
length1,219953
definitionB6Ng01-335I22.b B6Ng01-335I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttatgtttaataccgaattctttacagaatgaaataaag
tttttactggaataagatggcccattgtctgtcttaataagtttaggcaa
tcccatggcattaaatgcttgtaggcaatgatcaattacgttttttgaag
cttctcctgtatgcagagaagcaaaaagaaatcctgaacaagtatcaatg
caaacatgtatatattttagttttccaaattctgcataatgggttatatc
catttgccaaatatgattaggcataaggcctctaggattaactcctagat
gcggcactggagataaagtaatacatttaggacattgttttacgatcatt
ctcgcttgctcctttgtgatcttatgtcggagccttagggtatggctaga
aagatgaaacctttcgtgatcacgttgggccaaagcaacccgatctgaaa
ctaaggcttctcctattagagctctgtcaatgcgatcattaccctctgcc
agaggtccaggaagaccagagtgagaccgtatgtggccaatataaaacgg
atttttccgggcgagaatgatgttttgtaattctgaaaataaagatcctg
acggcgtattgaagttaaacgtaccacaggtttccaataagggtactgac
tgagcaacatataaactgtcagtaaaaatattaaaagcctcatgcacaga
ctgaaaaaccttcagtactgctgttaattcagcgagctgagccgagagac
caggagtctctacgataacctgttgattactaataagatatccagctcgc
cctttagaggagccatcagtaaaaatcaatagagcattatttaaaggctg
taaggaagtcatcttaggaaatatcatatcatgcacatttaagaatttta
tcaacctatcttggggggtagtggctatctagagttccttcaaaccctaa
ttgtgcaagcaaccaatctgtactatgctgtttcagcccagtgtcctgac
tcacgctgtaaggctggacaatgatatctggctcctttccaaaataaggt
caatgctgccttctcagtgatatcattctggagcactgctttcggtgata
tgggcaaggaatattacggtttggggaggaatcccttcgaaatgtttatc
acagttaggaacttttgccatagccaaattcgcgtaggggcacacagtgt
agacgctgtactatataca
gaattctgttcaagtggctatcttctttaggtttgttgaaagattacttt
gttgccttttttcgagcttagtttccccctttgttagagttttcccttta
ttatcctttgaagggctggatttgtggaaagatattgtgtaaatttggtt
ttgtcatggaatactttggtttctccatctatggtaattgagagttttgc
tgggtatagtagcttgggctggcatttgtgttctcataggatctgtatga
tatctgccctgatcttctggctttcctagtctctggtgagaattctggtg
taattctgataggtctgcctgtatatgttacttgaccttttcccttactt
cttttaatattctttttttgttttgtgcatttggtgttttgattattatg
tgatgagcggaatttcttttctgttccaaactatttggagttctgtaggc
ttcttgtatgctcatgggaatctctttctttaggttggggaagttttctt
ctataattttgttgaagatacttactggccctttaagttggaaatcttct
tctcgtctatacctattatccttttttttctttttttctttttgggcttt
gttttgtttttgttgtttttatttgtttgtttgtttgtttttcgagacag
ggtttctctgaatagccctgcctgtcctgaatctcactcagtagaccagg
ctggcctggaactcagaaatcctcctgcttttgtcttcttgtgtcctgga
tttcctggatgtttggggttaggatcttttttgtatttcacattttcttt
cactgttgttcaatgttttctatggtatcttctgtatctcctctctctct
tgtattctgttgggtatgcttgcatcaatggctcttgactttttcctagg
tttctgtttcagagtggtctccctttttgaatttctttattgtttctact
ttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_116061606_116061742
seq2: B6Ng01-335I22.g_637_784

seq1  TTTTTTC---TTTTCTTTT----CTT--TTTTG--TTTGTT-TGTTTGTT  38
      |||||||   |||||||||    |||  |||||  |||||| | ||| ||
seq2  TTTTTTCTTTTTTTCTTTTTGGGCTTTGTTTTGTTTTTGTTGTTTTTATT  50

seq1  TGTTTGTTTTGTTTGTTTTTCGAGACAGGGTTTCTCTGTATAGCCCTGGC  88
      |||||| ||||||||||||||||||||||||||||||| ||||||||| |
seq2  TGTTTG-TTTGTTTGTTTTTCGAGACAGGGTTTCTCTGAATAGCCCTGCC  99

seq1  TGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATC  137
      ||||||| | ||||||  ||||||||||||||||| |||||||||||||
seq2  TGTCCTGAATCTCACTCAGTAGACCAGGCTGGCCTGGAACTCAGAAATC  148