BAC Information

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BAC

Clone NameB6Ng01-335J11
Chromosome11 (Build37)
Map Location 24,310,102 - 24,310,676
singlet/doubletsinglet
Overlap genenone
Upstream geneAhsa2, 1700093K21Rik, A730027B03Rik, 0610010F05Rik, Pex13, 4933435A13Rik, Rel, Papolg, A830031A19Rik, LOC100042256, Bcl11a
Downstream geneLOC100042282
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335J11.bB6Ng01-335J11.g
ACCGA120769GA120770
length9941,185
definitionB6Ng01-335J11.b B6Ng01-335J11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttaataccaacacacaggaagttaactttaataaatggaaa
cttatttgctattggttaaagaagaatattttagttagggttacatgatg
atacatcacgactaaaagcagcatgtcagagagaaggatttattttgctt
acaattctaaatcattgttcatcatctaagaaagtctggatagaaattca
atcagggcaggaaacctgaggcaggagctgatgcagaagctatggagggt
gcgcttactggcttgttcctcatgatactcagcctgctttcttatagaaa
ccaggacttttgtgattatgttacctcactcagaatgatatcctccagat
ccatccatttgcctaagaatttcataaattcattctttttaatagctgag
tagtactccattgtgtaaatgtaccacattttttgcatccattcctctgt
tgagggacatctgggttctttccagcttctggatattataaataaggcta
ctatgaacatagtagagcatgtgtctttattaccagttggaacatcttgt
gagtatatgcccaggagaggtattgctggatcttcctgaagtactatgtc
caattttctgaggaaccgctatactgatttccagagtggttgtaccagtt
tgcaatcccaccaacaatggaggagttttcctctttctccacatccttgc
cagcatctgctgtcacctgagtttttgatcttagccattctgagtggtgt
gaggtgaaatcttagggttgtttggatttgtatttccctgatgactaagg
atgttgaactttttttaggtgcttctcagccatttggtattcctcagttg
cgaatttatttagctctgttccccatttttgtgaggagcgggtgtggcag
cagtcccaagaaagcgccagggactgcagctaagtcttatgacttgcacc
tgacttcctcatacacctgaaaataagccacgaccatcgtgaga

gaattctttggtttctccatctatggtaatttagagttttgctgggtata
gtagcctgcgctggcatttgtcttctcttagggtctgtataacatctgtc
caggatcttctggctttcatagtctctggtgagaagtctggggtagttct
aataggcctgcctttatatgttaattgacctttttcccttactgctttta
ttattctatctttatttagtgcatttgttgttcttattattatgtgtcag
gaggaatttattttctggtccagtctatttggagttctgtaggcttcttg
catgttcatgggcatctctttctttaggtttgggaagttttcttctataa
ttttgttgaagatatttactggccctttaagttgaaaatcttcattctca
tttactcctattatctgtaagtttggtcttctcattgtgtcctggatttc
ctggatgttttgagttagaatctttttgcattttccattttctttgattg
ttgtgtccatgttctctatggaatcttctgcacctgagattctctcttcc
atctcttgtattctgttgctgatgctggcatctgtgattccagatttctt
tcctagggtttctatctccagtgttgtctcactttggattttctttattg
tttctacttcccttttaggtcttggatggttttgtccaattccatcacct
gttttgtttgttttttttttccctgtgtttctttaaggatttctacctat
ttagcaatgttctcctgaatttctttaagtgagttattaaagtccttcct
gatgtcctctaccagcatcatgagatatggttttaaatccaagtcttgct
tttcgggtgtgttgggggtatccaggactggctgagtgggactgctgggt
tctgatgatggtgagtggccttggtttctgttagtaagattctatgtttg
ctttcgacatctggtaatctctggagttagttgtatagttgtctctggtt
gaagcttgtcctcctgtgatctgttaaccttctgccagcaaggctggaga
gtctagctctctcctgaatctcagtggtcgaagtactccttctgcagcaa
gctttcctctttgcaggaaggtgccataatctggtgatcaaacctgcctc
tcggctgggaaataagagcccaaaaccggtactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_24310102_24310676
seq2: B6Ng01-335J11.b_44_618

seq1  GAATTCACTTTAATACCAACACACAGGAAGTTAACTTTAATAAATGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTAATACCAACACACAGGAAGTTAACTTTAATAAATGGAAA  50

seq1  CTTATTTGCTATTGGTTAAAGAAGAATATTTTAGTTAGGGTTACATGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTGCTATTGGTTAAAGAAGAATATTTTAGTTAGGGTTACATGATG  100

seq1  ATACATCACGACTAAAAGCAGCATGTCAGAGAGAAGGATTTATTTTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCACGACTAAAAGCAGCATGTCAGAGAGAAGGATTTATTTTGCTT  150

seq1  ACAATTCTAAATCATTGTTCATCATCTAAGAAAGTCTGGATAGAAATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTCTAAATCATTGTTCATCATCTAAGAAAGTCTGGATAGAAATTCA  200

seq1  ATCAGGGCAGGAAACCTGAGGCAGGAGCTGATGCAGAAGCTATGGAGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGCAGGAAACCTGAGGCAGGAGCTGATGCAGAAGCTATGGAGGGT  250

seq1  GCGCTTACTGGCTTGTTCCTCATGATACTCAGCCTGCTTTCTTATAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTTACTGGCTTGTTCCTCATGATACTCAGCCTGCTTTCTTATAGAAA  300

seq1  CCAGGACTTTTGTGATTATGTTACCTCACTCAGAATGATATCCTCCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTTTTGTGATTATGTTACCTCACTCAGAATGATATCCTCCAGAT  350

seq1  CCATCCATTTGCCTAAGAATTTCATAAATTCATTCTTTTTAATAGCTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCATTTGCCTAAGAATTTCATAAATTCATTCTTTTTAATAGCTGAG  400

seq1  TAGTACTCCATTGTGTAAATGTACCACATTTTTTGCATCCATTCCTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTCCATTGTGTAAATGTACCACATTTTTTGCATCCATTCCTCTGT  450

seq1  TGAGGGACATCTGGGTTCTTTCCAGCTTCTGGATATTATAAATAAGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGACATCTGGGTTCTTTCCAGCTTCTGGATATTATAAATAAGGCTA  500

seq1  CTATGAACATAGTAGAGCATGTGTCTTTATTACCAGTTGGAACATCTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAACATAGTAGAGCATGTGTCTTTATTACCAGTTGGAACATCTTGT  550

seq1  GAGTATATGCCCAGGAGAGGTATTG  575
      |||||||||||||||||||||||||
seq2  GAGTATATGCCCAGGAGAGGTATTG  575


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