BAC Information

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BAC

Clone NameB6Ng01-337G14
Chromosome11 (Build37)
Map Location 61,893,657 - 62,045,781
singlet/doubletdoublet
Overlap geneSpecc1
Upstream geneLOC668228, Tnfrsf13b, Usp22, LOC668239, Aldh3a1, Aldh3a2, 4933429E10Rik, 1300013J15Rik, LOC100042602, LOC626150, Zfp179, Mfap4, Mapk7, 3110043A19Rik, Eppb9, Epn2, Grap, Slc5a10, 2310040C09Rik, Prpsap2, Ulk2, Akap10, D630015H07, LOC626325, LOC100041558
Downstream geneAdora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337G14.bB6Ng01-337G14.g
ACCGA122050GA122051
length801930
definitionB6Ng01-337G14.b B6Ng01-337G14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,044,981 - 62,045,781)(61,893,657 - 61,894,591)
sequence
gaattccagttcaaaggaaatggtaatctccactgagatttacagaaagc
gctctgtgataagctatgatggaaacagagaccttaatacttcaaagctt
tttagcagtttcaaacggaaagagtttccctccaaagtcttctaggacaa
gctccaggctgtattcccctagacgctctagttgagggaaaaggcttaaa
accctggcctgaaaggtattgagtccataccaacagcaaatatcctggaa
tacatctaagctcatctgcaaactcagccagtgcctgtgtgaagaaaggt
tctccaggaggtgagggagaagttcttcccagcctgttcatgcaggtcaa
aagcccaactcagggaacctctcttcttggccaccaccttatcatttcca
atgagccagaccacctccactgacctctagaggctcagttcttccaatat
gtctgccctcagactcccagaccatgcccactatcaacagaggcaccagg
ccaatgtctatgcataggcgcagtgtgtggaccatggtgtattgatgggg
cagacatttatccacagtggcactgtaactgaatagttgtgcatccaaca
atgattagtggtcctgacaataaagtacgggtatatggcaggagctccta
aaggaccagataggctgggaattgtggggatgcctcttaaaggtaaggca
tgttaggcactagtgagacagaagtgacataccacccaaagtgggattga
aagagtccctctgaagctgtggttaaggtaggagtaggagaggaggggtg
g
gaattcaatccctagaatccacatggaagaaggagggaactagtttattc
acttttgtcttctgacctcctctgtaccacacacaagtagacagataaat
gtaataaagaggaaatgaatggtatttcagacctcctttcagaccccttc
tgagacttgagagggctggttggataagcctgttcttcaagtgatgctct
tactcatttttggaggagtgtttaggcagaaaccaagtttcttagaggct
gcttttgtagctctgtggcatctatactggcagcaaggttcttaaatgtg
tgtggttttctgagttagttcatcataactttttgtggtattgcaggttg
gtaaagaaaaatgatcaagttaaagacagaagttccatgttcaagggcag
ttataattaaaagagcacggtgaaggctacaccccttacttgctacaggg
tctagttaacagcctttcaatttctaggcaggttgccacagggctacagc
ctgtgtactgtttaaaggcatttggataaatcaatggacaagcccagcca
gcttggagttgtattgacccagagggaggagtgcaattttataattctgc
ctagaaagtgagctgagaacttacaatcgatcctcctgctttcacttccc
aagctagcattacaggcacaggctacttctggggtttttgcagtgctgag
gatcaagcccagcactttgtgtatgatgagtactacaaactaagctaatc
caagccccatttagcttatcattcttttttatccttccttccttccttcc
ttccttccttccttcctccctccctcctttcctccctccttctctctcac
ccccctctctctttctttcttctttctttctttctttctttcttctttct
ttctccttccttccttcctcctcctttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_62044981_62045781
seq2: B6Ng01-337G14.b_47_847 (reverse)

seq1  CCACCCCTCCTCTCCTACTCCTACCTTAACCACAGCTTCAGAGGGACTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCTCCTCTCCTACTCCTACCTTAACCACAGCTTCAGAGGGACTCT  50

seq1  TTCAATCCCACTTTGGGTGGTATGTCACTTCTGTCTCACTAGTGCCTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATCCCACTTTGGGTGGTATGTCACTTCTGTCTCACTAGTGCCTAAC  100

seq1  ATGCCTTACCTTTAAGAGGCATCCCCACAATTCCCAGCCTATCTGGTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTTACCTTTAAGAGGCATCCCCACAATTCCCAGCCTATCTGGTCCT  150

seq1  TTAGGAGCTCCTGCCATATACCCGTACTTTATTGTCAGGACCACTAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGCTCCTGCCATATACCCGTACTTTATTGTCAGGACCACTAATCA  200

seq1  TTGTTGGATGCACAACTATTCAGTTACAGTGCCACTGTGGATAAATGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGATGCACAACTATTCAGTTACAGTGCCACTGTGGATAAATGTCT  250

seq1  GCCCCATCAATACACCATGGTCCACACACTGCGCCTATGCATAGACATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCATCAATACACCATGGTCCACACACTGCGCCTATGCATAGACATTG  300

seq1  GCCTGGTGCCTCTGTTGATAGTGGGCATGGTCTGGGAGTCTGAGGGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTGCCTCTGTTGATAGTGGGCATGGTCTGGGAGTCTGAGGGCAGA  350

seq1  CATATTGGAAGAACTGAGCCTCTAGAGGTCAGTGGAGGTGGTCTGGCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGGAAGAACTGAGCCTCTAGAGGTCAGTGGAGGTGGTCTGGCTCA  400

seq1  TTGGAAATGATAAGGTGGTGGCCAAGAAGAGAGGTTCCCTGAGTTGGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATGATAAGGTGGTGGCCAAGAAGAGAGGTTCCCTGAGTTGGGCT  450

seq1  TTTGACCTGCATGAACAGGCTGGGAAGAACTTCTCCCTCACCTCCTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCTGCATGAACAGGCTGGGAAGAACTTCTCCCTCACCTCCTGGAG  500

seq1  AACCTTTCTTCACACAGGCACTGGCTGAGTTTGCAGATGAGCTTAGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTCTTCACACAGGCACTGGCTGAGTTTGCAGATGAGCTTAGATGT  550

seq1  ATTCCAGGATATTTGCTGTTGGTATGGACTCAATACCTTTCAGGCCAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGGATATTTGCTGTTGGTATGGACTCAATACCTTTCAGGCCAGGG  600

seq1  TTTTAAGCCTTTTCCCTCAACTAGAGCGTCTAGGGGAATACAGCCTGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGCCTTTTCCCTCAACTAGAGCGTCTAGGGGAATACAGCCTGGAG  650

seq1  CTTGTCCTAGAAGACTTTGGAGGGAAACTCTTTCCGTTTGAAACTGCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCCTAGAAGACTTTGGAGGGAAACTCTTTCCGTTTGAAACTGCTAA  700

seq1  AAAGCTTTGAAGTATTAAGGTCTCTGTTTCCATCATAGCTTATCACAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTTGAAGTATTAAGGTCTCTGTTTCCATCATAGCTTATCACAGAG  750

seq1  CGCTTTCTGTAAATCTCAGTGGAGATTACCATTTCCTTTGAACTGGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTCTGTAAATCTCAGTGGAGATTACCATTTCCTTTGAACTGGAATT  800

seq1  C  801
      |
seq2  C  801

seq1: chr11_61893657_61894591
seq2: B6Ng01-337G14.g_65_994

seq1  GAATTCAATCCCTAGAATCCACATGGAAGAAGGAGGGAACTAGTTTATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCCTAGAATCCACATGGAAGAAGGAGGGAACTAGTTTATTC  50

seq1  ACTTTTGTCTTCTGACCTCCTCTGTACCACACACAAGTAGACAGATAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGTCTTCTGACCTCCTCTGTACCACACACAAGTAGACAGATAAAT  100

seq1  GTAATAAAGAGGAAATGAATGGTATTTCAGACCTCCTTTCAGACCCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAAAGAGGAAATGAATGGTATTTCAGACCTCCTTTCAGACCCCTTC  150

seq1  TGAGACTTGAGAGGGCTGGTTGGATAAGCCTGTTCTTCAAGTGATGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTTGAGAGGGCTGGTTGGATAAGCCTGTTCTTCAAGTGATGCTCT  200

seq1  TACTCATTTTTGGAGGAGTGTTTAGGCAGAAACCAAGTTTCTTAGAGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATTTTTGGAGGAGTGTTTAGGCAGAAACCAAGTTTCTTAGAGGCT  250

seq1  GCTTTTGTAGCTCTGTGGCATCTATACTGGCAGCAAGGTTCTTAAATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTAGCTCTGTGGCATCTATACTGGCAGCAAGGTTCTTAAATGTG  300

seq1  TGTGGTTTTCTGAGTTAGTTCATCATAACTTTTTGTGGTATTGCAGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTTCTGAGTTAGTTCATCATAACTTTTTGTGGTATTGCAGGTTG  350

seq1  GTAAAGAAAAATGATCAAGTTAAAGACAGAAGTTCCATGTTCAAGGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGAAAAATGATCAAGTTAAAGACAGAAGTTCCATGTTCAAGGGCAG  400

seq1  TTATAATTAAAAGAGCACGGTGAAGGCTACACCCCTTACTTGCTACAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTAAAAGAGCACGGTGAAGGCTACACCCCTTACTTGCTACAGGG  450

seq1  TCTAGTTAACAGCCTTTCAATTTCTAGGCAGGTTGCCACAGGGCTACAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTTAACAGCCTTTCAATTTCTAGGCAGGTTGCCACAGGGCTACAGC  500

seq1  CTGTGTACTGTTTAAAGGCATTTGGATAAATCAATGGACAAGCCCAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTACTGTTTAAAGGCATTTGGATAAATCAATGGACAAGCCCAGCCA  550

seq1  GCTTGGAGTTGTATTGACCCAGAGGGAGGAGTGCAATTTTATAATTCTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAGTTGTATTGACCCAGAGGGAGGAGTGCAATTTTATAATTCTGC  600

seq1  CTAGAAAGTGAGCTGAGAACTTACAATCGATCCTCCTGCTTTCACTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAGTGAGCTGAGAACTTACAATCGATCCTCCTGCTTTCACTTCCC  650

seq1  AAGCTAGCATTACAGGCACAGGCTACTTCTGGGGTTTTTGCAGTGCTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTAGCATTACAGGCACAGGCTACTTCTGGGGTTTTTGCAGTGCTGAG  700

seq1  GATCAAGCCCAGCACTTTGTGTATGATGAGTACTACAAACTAAGCTAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGCCCAGCACTTTGTGTATGATGAGTACTACAAACTAAGCTAATC  750

seq1  CAAGCCCCATTTAGCTTATCATTCTTTTTTATCCTTCCTTCCTTCCTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCCATTTAGCTTATCATTCTTTTTTATCCTTCCTTCCTTCCTTCC  800

seq1  TTCCTTCCTTCCTTCCTCCCTCCCTCCTTTCCTCCCTCCTTCTCTCTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCTTCCTCCCTCCCTCCTTTCCTCCCTCCTTCTCTCTCAC  850

seq1  CCCCCTCTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTT  900
      ||||||||||||||||||| ||||||||||||||||||||||| ||||||
seq2  CCCCCTCTCTCTTTCTTTC-TTCTTTCTTTCTTTCTTTCTTTC-TTCTTT  898

seq1  CTTTCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTT  935
      ||||| ||||||||||||||||  | |||||||||
seq2  CTTTC-TCCTTCCTTCCTTCCT--CCTCCTTTCTT  930