BAC Information

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BAC

Clone NameB6Ng01-340A17
Chromosome11 (Build37)
Map Location 66,925,500 - 66,926,282
singlet/doubletsinglet
Overlap genenone
Upstream geneDnahc9, Gm879, LOC668323, A530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3
Downstream geneMyh2, Myh1, Myh4, Myh8, Myh13, Gas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-340A17.bB6Ng01-340A17.g
ACCGA123869GA123870
length1,217785
definitionB6Ng01-340A17.b B6Ng01-340A17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcatctgattcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgttcctactctctctccc
cgctttacttctgatagcttgtcctgaatttcctctagaattttcagccc
tatcttaatcacttgataacatgtgaaaaggaacaaaagggctcctaaca
ccagaaaaaattcaaggccaaacatattccactttacttctgatagactg
tcttgaatttccttagaaagttcaagatcagacttacctcgtaaagctgt
actcactggtactctcgttccccagctgaaaagttctgaattcatacagt
tgaatccttcttaacagtctgctttacgggaacctttattaccgcgaccc
gcagttctggttctggaatgagggatcttccttgcgccagtcccgagttt
tttctcgtcccggaatttctcgtcccggaattcggcaccaattgttatta
gacgcgttctcacgaccggccaggaaagacgcaacaaaccagaatcttct
gcggcaaagctttattgcttacatcttcaggagccagagtgcaagaagca
agagagagagaaaacgaaaccccgtcccttttttaggagagttatatttc
gcctaggacgtgtcactccctgattggctgcagcccatcggccgagttga
cgtcacggggaaggcagagcacatggagtggagaaccaccctcggcatat
gcgcagattatttgtttaccacttagaacacagctgtcagcgccatcttg
taacggcgaatgtgggcgcggctcccaacatagatacagacttttatttc
tgtcatcatcccctaaacactacaatttaacaacactcgtggcatgccat
tgtactgaaataagaagtatgagagatgtttcaagcagaatgtttcttac
tatgggatgcaccctcttggggatgaacatccttcacagagtcacctagc
catggaaacagatgttacatatgatcataacgtagcaaatttacagtcta
tgcgagagaagccacca
gaattcagcgtatctcatgcctttgtctggccctgccattgtcagacaat
tcagctagctcttgggaactgctgtttctatcagacactattgtgtgggg
ccttttatctgagctgtagcattgatcctctagggtgggtgcaataatta
ttcatgttacagatgaagaaatagaggcgcacagatgtctcactcttaac
atatgaatatggtattgagtccccagtgacaccaacctgttaagatgtca
ctcagtacccacccagtcccgccctgagcagaatgaatggacggggaaat
ataattttaaagtactgtttaaataaacacatattttctgtatgtttttt
aagtttgagactaaattctagatgtgctcttagcctggcatgcagagaag
gagactctgggatggagggggcgggacacagacatggaaactctctcgct
ttgaaaagacatagtttctcgggatgatgcggctgtctgatgggcattgg
ggagcggaaaggcagattctggagtttcagagcttctgagtcacctaccc
tctcttcctgcagctgaaaacagtacccactttggcctgtaggtggcagc
ttaggctcaacagaacccaagtctgttttttgataccctagttcccacca
gctgggaatcattttcagatggaggtttgggggtgttataaactcctgat
gtatggagactgtgcctcacatactctgggtttcgatgatcttgtgggtg
acctggggcaattcggtggtggtggtggtggtggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_66925500_66926282
seq2: B6Ng01-340A17.g_68_852 (reverse)

seq1  ACCACCACCACCACCACCACCGAATTG-CCCAGGTCACCCACAAGATCAT  49
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACCACCACCACCACCACCACCGAATTGCCCCAGGTCACCCACAAGATCAT  50

seq1  CGAAA-CCAGAGTATGTGAGGCACAGTCTCCATACATCAGGAGTTTATAA  98
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAACCCAGAGTATGTGAGGCACAGTCTCCATACATCAGGAGTTTATAA  100

seq1  CACCCCCAAACCTCCATCTGAAAATGATTCCCAGCTGGTGGGAACTAGGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCAAACCTCCATCTGAAAATGATTCCCAGCTGGTGGGAACTAGGG  150

seq1  TATCAAAAAACAGACTTGGGTTCTGTTGAGCCTAAGCTGCCACCTACAGG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAAACAGACTTGGGTTCTGTTGAGCCTAAGCTGCCACCTACAGG  200

seq1  CCAAAGTGGGTACTGTTTTCAGCTGCAGGAAGAGAGGGTAGGTGACTCAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTGGGTACTGTTTTCAGCTGCAGGAAGAGAGGGTAGGTGACTCAG  250

seq1  AAGCTCTGAAACTCCAGAATCTGCCTTTCCGCTCCCCAATGCCCATCAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTGAAACTCCAGAATCTGCCTTTCCGCTCCCCAATGCCCATCAGA  300

seq1  CAGCCGCATCATCCCGAGAAACTATGTCTTTTCAAAGCGAGAGAGTTTCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGCATCATCCCGAGAAACTATGTCTTTTCAAAGCGAGAGAGTTTCC  350

seq1  ATGTCTGTGTCCCGCCCCCTCCATCCCAGAGTCTCCTTCTCTGCATGCCA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGTGTCCCGCCCCCTCCATCCCAGAGTCTCCTTCTCTGCATGCCA  400

seq1  GGCTAAGAGCACATCTAGAATTTAGTCTCAAACTTAAAAAACATACAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAGAGCACATCTAGAATTTAGTCTCAAACTTAAAAAACATACAGAA  450

seq1  AATATGTGTTTATTTAAACAGTACTTTAAAATTATATTTCCCCGTCCATT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGTTTATTTAAACAGTACTTTAAAATTATATTTCCCCGTCCATT  500

seq1  CATTCTGCTCAGGGCGGGACTGGGTGGGTACTGAGTGACATCTTAACAGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGCTCAGGGCGGGACTGGGTGGGTACTGAGTGACATCTTAACAGG  550

seq1  TTGGTGTCACTGGGGACTCAATACCATATTCATATGTTAAGAGTGAGACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTCACTGGGGACTCAATACCATATTCATATGTTAAGAGTGAGACA  600

seq1  TCTGTGCGCCTCTATTTCTTCATCTGTAACATGAATAATTATTGCACCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCGCCTCTATTTCTTCATCTGTAACATGAATAATTATTGCACCCA  650

seq1  CCCTAGAGGATCAATGCTACAGCTCAGATAAAAGGCCCCACACAATAGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGAGGATCAATGCTACAGCTCAGATAAAAGGCCCCACACAATAGTG  700

seq1  TCTGATAGAAACAGCAGTTCCCAAGAGCTAGCTGAATTGTCTGACAATGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAGAAACAGCAGTTCCCAAGAGCTAGCTGAATTGTCTGACAATGG  750

seq1  CAGGGCCAGACAAAGGCATGAGATACGCTGAATTC  783
      |||||||||||||||||||||||||||||||||||
seq2  CAGGGCCAGACAAAGGCATGAGATACGCTGAATTC  785