BAC Information

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BAC

Clone NameB6Ng01-347F17
Chromosome11 (Build37)
Map Location 11,082,842 - 11,083,858
singlet/doubletsinglet
Overlap geneVwc2
Upstream geneLOC382483
Downstream geneZpbp, LOC625132, EG432534, 4930415F15Rik, Ikzf1, Fignl1, Ddc, Grb10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347F17.bB6Ng01-347F17.g
ACCGA128984GA128985
length1,2411,019
definitionB6Ng01-347F17.b B6Ng01-347F17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcccactattattgtgtgagctgcaatgtgtgctttgagcttta
gtaaagtttctcttatgaatgtggctgcccttgcatttggagcatagatg
ttcagaattggtagaattttcctttgatgagtatgaagtttccttcctta
tcctttttgataacttttggttgcaggttggttttattccatcctagact
gactactccagcttgtgtcataggacgatttgctcggaaaaaattttccc
agcccttttctctgagatagtgtctgtctttgacactgaggtattattcc
tatatgcagcaaaatgctaggtcctgtttacatatccagtttgtttttct
atatctttttattggtgaactgagtccattgatgttgagttattaaggaa
tagtgattgttgcttcctgtcattttttatgttatttttatgtttctgtg
gctatcttctttagggtttgttgaaaggagattactttcttgctttttct
atggcatagtttcccttcttatctattatcctttgtagggctagatttgt
ggaaagatattgtataaatttgtttttgtcatggaatatcttggtttctc
catctatggtaattgagagttttgctgagtatagtagcctgggctgacat
ttatgttctcttagagtctgtatgacatctgcacagtatcttctagcttt
catattctctggtgagaagtctggtgtaattttgataggtctgcctttat
gtgttacttgaccttttccacttattgcttttaatattctttctttgttt
tgtgtatttgatgttttgactgttttgtggcgggagtattttttttgttt
tgtttgttttgttttgttttgttttgtttttttttttctggtccaatcta
tttgggagttatgtaggcttcttttatgttcatgggcatctcttttcttt
aggttagggaagttttcttctataattttgttgagatatttactggccct
taaagctgttaatcttcacctctcttctataccttttatccttaggtttg
gtctctcattggtgtcctgaaatttcatcactggtcttgggctaggagcc
ttgtgcctttttgcatttcttgaatggtgtgtcacgagttttcatggatc
ttcctgcaccctggaatccttctcaaggtcctgtaatcgttggcgaagct
ctgtatctcgatgacaccctgtgatagcttttctgcatcag
gaattctctgcatggattaacttaccaagaaggttgtgtgaccaacctat
gctgctgcctttacctccgcttcatttttgacatactcataaagcatcac
acttcattaactgcctgagtcagttcaactttcagtctctcacaagtgtg
aataatcttctatgagcatttatgagccagcttttgttccagagaaagct
cttatttatctaggatagatttacaggaatggaaatgctgggagttgggg
catgttttctgtagtaagaaatgtcgacagggtttcacaccatagctctc
cagattgtattctcttcaggagagtgtgagtgcttttgtttgtgacataa
ttatgtggtgctccatatgattatagatttcttggatcacaggatttaat
gcaaagacacttagatgaaaaacagagtgatttgtaacttatagatagga
acacagtgtgttgcacttagagatatacacacagcaagatggctaccaga
gcaacattttgggtcccatgataagtagaaaaggcttgatggcactagct
ggaaataagacgtaagcaaggagatttggtgcccagagcagcctctggca
agggtatgtgtgtacttgattttcaggaattctcagagcctgctaagaga
aatcactgtaaatgcacttagaaaattatctgtgccttcagaattcagtc
agaaatctaatctgggtgaaatagcacttatgaagcatttaattaaacat
ttgctccatgccattgccaacattggttattgacagcacttaaatttaga
aattctaaaaggtgaacctcaattttcatccccatgactgccaagagtga
acattcctttcctaaggctttatttttcattcagaaaagtgaactttctg
aggtgtccagatctttggctcacttttctttggagttgcttgattctcat
tattgaatttgaactgcctattcaaacccttgggatctctctctctctct
ctcctctctctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_11082842_11083858
seq2: B6Ng01-347F17.g_70_1088

seq1  GAATTCTCTGCATGGATTAACTTACCAAGAAGGTTGTGTGACCAACCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCATGGATTAACTTACCAAGAAGGTTGTGTGACCAACCTAT  50

seq1  GCTGCTGCCTTTACCTCCGCTTCATTTTTGACATACTCATAAAGCATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCCTTTACCTCCGCTTCATTTTTGACATACTCATAAAGCATCAC  100

seq1  ACTTCATTAACTGCCTGAGTCAGTTCAACTTTCAGTCTCTCACAAGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATTAACTGCCTGAGTCAGTTCAACTTTCAGTCTCTCACAAGTGTG  150

seq1  AATAATCTTCTATGAGCATTTATGAGCCAGCTTTTGTTCCAGAGAAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCTTCTATGAGCATTTATGAGCCAGCTTTTGTTCCAGAGAAAGCT  200

seq1  CTTATTTATCTAGGATAGATTTACAGGAATGGAAATGCTGGGAGTTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTATCTAGGATAGATTTACAGGAATGGAAATGCTGGGAGTTGGGG  250

seq1  CATGTTTTCTGTAGTAAGAAATGTCGACAGGGTTTCACACCATAGCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTCTGTAGTAAGAAATGTCGACAGGGTTTCACACCATAGCTCTC  300

seq1  CAGATTGTATTCTCTTCAGGAGAGTGTGAGTGCTTTTGTTTGTGACATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGTATTCTCTTCAGGAGAGTGTGAGTGCTTTTGTTTGTGACATAA  350

seq1  TTATGTGGTGCTCCATATGATTATAGATTTCTTGGATCACAGGATTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGGTGCTCCATATGATTATAGATTTCTTGGATCACAGGATTTAAT  400

seq1  GCAAAGACACTTAGATGAAAAACAGAGTGATTTGTAACTTATAGATAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGACACTTAGATGAAAAACAGAGTGATTTGTAACTTATAGATAGGA  450

seq1  ACACAGTGTGTTGCACTTAGAGATATACACACAGCAAGATGGCTACCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGTGTTGCACTTAGAGATATACACACAGCAAGATGGCTACCAGA  500

seq1  GCAACATTTTGGGTCCCATGATAAGTAGAAAAGGCTTGATGGCACTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATTTTGGGTCCCATGATAAGTAGAAAAGGCTTGATGGCACTAGCT  550

seq1  GGAAATAAGACGTAAGCAAGGAGATTTGGTGCCCAGAGCAGCCTCTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATAAGACGTAAGCAAGGAGATTTGGTGCCCAGAGCAGCCTCTGGCA  600

seq1  AGGGTATGTGTGTACTTGATTTTCAGGAATTCTCAGAGCCTGCTAAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATGTGTGTACTTGATTTTCAGGAATTCTCAGAGCCTGCTAAGAGA  650

seq1  AATCACTGTAAATGCACTTAGAAAATTATCTGTGCCTTCAGAATTCAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTGTAAATGCACTTAGAAAATTATCTGTGCCTTCAGAATTCAGTC  700

seq1  AGAAATCTAATCTGGGTGAAATAGCACTTATGAAGCATTTAATTAAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTAATCTGGGTGAAATAGCACTTATGAAGCATTTAATTAAACAT  750

seq1  TTGCTCCATGCCATTGCCAACATTGGTTATTGACAGCACTTAAATTTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCATGCCATTGCCAACATTGGTTATTGACAGCACTTAAATTTAGA  800

seq1  AATTCTAAAAGGTGAACCTCAATTTTCATCCCCATGACTGCCAAGAGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAAAAGGTGAACCTCAATTTTCATCCCCATGACTGCCAAGAGTGA  850

seq1  ACATT-CTTTCCTAAGGCTTTA-TTTTCATTCAG-AAAGTGAACTTTCTG  897
      ||||| |||||||||||||||| ||||||||||| |||||||||||||||
seq2  ACATTCCTTTCCTAAGGCTTTATTTTTCATTCAGAAAAGTGAACTTTCTG  900

seq1  AGGTGTCCAGATCTTTGGCTCACTTTTCTTT-GAGTTGCTTGATTCTCAT  946
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGGTGTCCAGATCTTTGGCTCACTTTTCTTTGGAGTTGCTTGATTCTCAT  950

seq1  TATTG-ATTTGAACTGGCTTATTCAAACCCTTTGTGATCTCTCTCTCTCT  995
      ||||| ||||||||| || ||||||||||| ||| |||||||||||||||
seq2  TATTGAATTTGAACT-GCCTATTCAAACCC-TTGGGATCTCTCTCTCTCT  998

seq1  CTCTCTCTCTCTCTCTCTCTCT  1017
      ||||| ||||||||||||||||
seq2  CTCTC-CTCTCTCTCTCTCTCT  1019