BAC Information

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BAC

Clone NameB6Ng01-349M10
Chromosome11 (Build37)
Map Location 26,233,670 - 26,234,827
singlet/doubletsinglet
Overlap genenone
Upstream gene5730522E02Rik, LOC100042328, LOC100042345
Downstream geneFancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349M10.bB6Ng01-349M10.g
ACCGA130664GA130665
length1,1621,225
definitionB6Ng01-349M10.b B6Ng01-349M10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacattaaaatttatgtgtgatatagacattgccttttgcttt
gatttatctttattaaaatatagttttaaattttatgtatccatctctgg
tctttctattcctattccattacatttagaaaatttagaaaattctagtt
gtttctggtaattacttttggcatactaaaggttcatttatattgtatat
aattttttcaataataaatgtattatccaccaattttttggtatatagaa
aattcccaaaagaaaacactttttggtaagtttttcctaaataataacat
atgcacactaacttatgaaaatgagaaggtagactgtcttcatggcatgt
tgggacagtgaactccacccctctctctcacctgttttcttacatccctg
ctcccatatttgtggatagattttgtttagggatagtaaatatatttgct
ggcatatactgcaaaatgagtaataaaatgaacctgatacatcacttact
aaacaattatattaaaaatgaattattgctgcttttatccccatttgatt
gagaaactttttaaaatgttaatctggtacacagtatagagtctatattc
gaactatcacagacttgcgtaattttgtaccgaaacgctagaattttaat
taattttgaattatatgtttatagttgtataaacagatattttggcccag
aattttaaaaatacttttagtaacatattattgcaaggaatgttaagaaa
aattagtctttgtggtgggctaagatttctcaagattttgaaattctgag
ccgtgattttgtttttgattttctaatatggacaaataatattatgataa
atatattaggcataatttgtgattccatcaatgtctttttggttctttat
tttttccccttttagctattttgccatttttggctctgttacttggccct
ttatatcagtcccatgtgaagattggcctcgggtaggcccaaaaccagct
atggagccagtccacaggattctgaggaagagaggaaattcgtgggctga
aaaccaaaacgattatttgatgaggagaacctgtaagtgcaaaagcccct
gtaaatggcaagctgtaggaaaaaaggaggcttagtgccagttaatcaat
atacaaaggcaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgttagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcacagggctccc
aatgaggagctagaagaaagtatccaaggagctaaagggatcttcaaccc
ttataaggtggaacacattatgaactaaccagtaccccttggagctcttg
actctagctgcatattgtattcaaaagaatggcctagtcgcattcactga
aggaaaggccattgacacgcagtacctttggtgtgccaggtacaggggaa
cgcaggtctatggtgggaagtgtgatggttacggcatttctgcgcagctc
agacatactgtgcgagtagtgtatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26233670_26234827
seq2: B6Ng01-349M10.b_50_1211 (reverse)

seq1  TTGCCTTTGTAT-TTGATTACCTGGCACTAAACCCTCTTTTTTCCTACAG  49
      |||||||||||| ||||||| |||||||||| ||  ||||||||||||||
seq2  TTGCCTTTGTATATTGATTAACTGGCACTAAGCCTCCTTTTTTCCTACAG  50

seq1  CCTTGGCATCTACCAGGGCTTTTGGCACTTACAGTTTCTCCTCATCAAAT  99
       |||| ||| |||  |||||||| |||||||||| |||||||||||||||
seq2  -CTTGCCATTTACAGGGGCTTTT-GCACTTACAGGTTCTCCTCATCAAAT  98

seq1  AATCGTTTTGGTTTTCAGCCCACGA--TTTCTCTCTTCCTCAGAATCCTG  147
      |||||||||||||||||||||||||  || ||||||||||||||||||||
seq2  AATCGTTTTGGTTTTCAGCCCACGAATTTCCTCTCTTCCTCAGAATCCTG  148

seq1  TGGACTGGCTCCATAGCTGGTTTT-GGCCTACCCGAGGCCAATCTTCACA  196
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGGACTGGCTCCATAGCTGGTTTTGGGCCTACCCGAGGCCAATCTTCACA  198

seq1  TGGGAACTGATATAAAGGGCCAAGTAACAGAGCCAAAAATGGCAAAATAG  246
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGG-ACTGATATAAAGGGCCAAGTAACAGAGCCAAAAATGGCAAAATAG  247

seq1  CTAAAGGGGAAAAAATTAAAGAACCAAAAAGACATTGATGGAATCAC-AA  295
      ||||| ||| ||||| ||||||||||||||||||||||||||||||| ||
seq2  CTAAAAGGGGAAAAAATAAAGAACCAAAAAGACATTGATGGAATCACAAA  297

seq1  TTATG-CTAATATATTTATCATAATATTATTTGTCCATATTAGAAAATC-  343
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTATGCCTAATATATTTATCATAATATTATTTGTCCATATTAGAAAATCA  347

seq1  AAAACAAAATCACGGCTCAGAATTTCAAAATCTTGAGAAATCTTAGCCCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATCACGGCTCAGAATTTCAAAATCTTGAGAAATCTTAGCCCA  397

seq1  CCACAAAGACTAATTTTTCTTAACATTCCTTGCAATAATATGTTACTAAA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAGACTAATTTTTCTTAACATTCCTTGCAATAATATGTTACTAAA  447

seq1  AGTATTTTTAAAATTCTGGGCCAAAATATCTGTTTATACAACTATAAACA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTTAAAATTCTGGGCCAAAATATCTGTTTATACAACTATAAACA  497

seq1  TATAATTCAAAATTAATTAAAATTCTAGCGTTTCGGTACAAAATTACGCA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTCAAAATTAATTAAAATTCTAGCGTTTCGGTACAAAATTACGCA  547

seq1  AGTCTGTGATAGTTCGAATATAGACTCTATACTGTGTACCAGATTAACAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTGATAGTTCGAATATAGACTCTATACTGTGTACCAGATTAACAT  597

seq1  TTTAAAAAGTTTCTCAATCAAATGGGGATAAAAGCAGCAATAATTCATTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAGTTTCTCAATCAAATGGGGATAAAAGCAGCAATAATTCATTT  647

seq1  TTAATATAATTGTTTAGTAAGTGATGTATCAGGTTCATTTTATTACTCAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATAATTGTTTAGTAAGTGATGTATCAGGTTCATTTTATTACTCAT  697

seq1  TTTGCAGTATATGCCAGCAAATATATTTACTATCCCTAAACAAAATCTAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTATATGCCAGCAAATATATTTACTATCCCTAAACAAAATCTAT  747

seq1  CCACAAATATGGGAGCAGGGATGTAAGAAAACAGGTGAGAGAGAGGGGTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAATATGGGAGCAGGGATGTAAGAAAACAGGTGAGAGAGAGGGGTG  797

seq1  GAGTTCACTGTCCCAACATGCCATGAAGACAGTCTACCTTCTCATTTTCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCACTGTCCCAACATGCCATGAAGACAGTCTACCTTCTCATTTTCA  847

seq1  TAAGTTAGTGTGCATATGTTATTATTTAGGAAAAACTTACCAAAAAGTGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAGTGTGCATATGTTATTATTTAGGAAAAACTTACCAAAAAGTGT  897

seq1  TTTCTTTTGGGAATTTTCTATATACCAAAAAATTGGTGGATAATACATTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGGGAATTTTCTATATACCAAAAAATTGGTGGATAATACATTT  947

seq1  ATTATTGAAAAAATTATATACAATATAAATGAACCTTTAGTATGCCAAAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGAAAAAATTATATACAATATAAATGAACCTTTAGTATGCCAAAA  997

seq1  GTAATTACCAGAAACAACTAGAATTTTCTAAATTTTCTAAATGTAATGGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTACCAGAAACAACTAGAATTTTCTAAATTTTCTAAATGTAATGGA  1047

seq1  ATAGGAATAGAAAGACCAGAGATGGATACATAAAATTTAAAACTATATTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAATAGAAAGACCAGAGATGGATACATAAAATTTAAAACTATATTT  1097

seq1  TAATAAAGATAAATCAAAGCAAAAGGCAATGTCTATATCACACATAAATT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAGATAAATCAAAGCAAAAGGCAATGTCTATATCACACATAAATT  1147

seq1  TTAATGTATGAATTC  1158
      |||||||||||||||
seq2  TTAATGTATGAATTC  1162