CTTTTCTTCTCTTGTTCCCCCCCTTCCCTTCCTATATTAAAAACAAAACC
CACCNNCCNCAACTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAG
AGAATCCGCGGAATTCAGGACTCTCACAGCCCCACAACGGCGCCCAGCTC
TCTCCTCAGCAACAGACTGAAGGCTTTGGGCAAATTTCAGCTGTTTAATT
CCATGGTGGACAGGCTTGCCGTAAATTGCACCCTTAGGAACCGGGCGTTT
GCGACCACCACAGCAGACACAAATCCTGTAAATGACATAGCCTTGCTTAG
CCTTGTGCCCTAGTCTTCGAGCTTTGTCAGGCTGGGTGGGGCGGGGAGCC
CTGTGCAGTGCAGAGAGCTGGCGGTATTGCCAGCAGTGGACCCTCAGAAG
AAAGCTCATCATGTTGGACTGCTTCTTCCTCCATAGCTCCTCCATAGCTC
CTGGATGTATTTGAATGCACCCATCTTGGCTCACTGATGGCTGCCGCCAG
AGGAAAGAAAGAAGCCTTTCTCTTAAGTGTTGTTTCTTACAACACTTCTT
CATTATCACTTCATTATATACTCATTATATATAGTAGTATGAATGAGAAT
GTCCTCTGTATGCTCATATGCTTGAATGCTTGGTCACCAGTTAGTAGGAC
TGTTTGGGAAGGATTAAGAGGTGTGGCCTTGGAGGAGGTGTGGCCTTGTT
GGAGGTGTGGCCTTGTTGGAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGG
CCTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCAGAACAGCCAGACATATACAGAGAAACCATGTTTTGAAAAAAAAGC
AGGTGGCTGGAGAGATGGCTTAGTGGTTAAGAGCACTGACTGCTCTTCCA
AAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCACAGCCATTT
GTAATGGGATTTGGTGTCCTCTTCTGATGTGTCTGAAGACAGCTATAGTA
TACTCATATACGTAAATAAATCTTAAAAAAAATAAAAACAAAACAAACAA
CAGTATTTTAGCTAATGTAGTTATTTTCTTCTTTAAGGTGATTTCATAAT
GAAAATAATTTAAGATAAATATGCCACAGGGTGTCTTTTTCAGCAACCTT
AGTTGACAGTTACTTTCAAGACTTGAAAAACAGCATTCCACACCTTCTAA
CCTTTAGAGTTTCTGCTTATAATCTTGCTGGAATTCTGGTGGACTTCTTT
TATAAGTGACTTAACGCTTCTCAATGTTCTTTCCTTATGTACTTTTAGCA
GTTTAGCTATAATGATGTGGAGAGGTTTCCTTCTGAGCATGTCATCTTGA
GATTCTAAATCTAAATCTCTGTAGGATCCTTTATGACAGTAATTCAATTG
TTTAATTATTCCCAAAATTATTG

Query= MSMg01no045_b05.g1 MSMg01no045_b05.g1 CHROMAT_FILE:
MSMg01no045_b05.g1 PHD_FILE: MSMg01no045_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:04:56 2005
         (610 letters)



>mm_chr11_20630135_20631140
          Length = 1006

 Score = 1116 bits (577), Expect = 0.0
 Identities = 601/611 (98%), Gaps = 5/611 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagaacagccagacatatacagagaaaccatgttttgaaaaa-aaagcaggtggctggag 59
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 772 cagaacagccagacatatacagagaaaccatgttttgaaaaacaaagcaggtggctggag 713

                                                                       
Query: 60  agatggcttagtggttaagagcactgactgctcttccaaaggtcctgagttcaattccca 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 agatggcttagtggttaagagcactgactgctcttccaaaggtcctgagttcaattccca 653

                                                                       
Query: 120 gcaaccacatggtggctcacagccatttgtaatgggatttggtgtcctcttctgatgtgt 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 gcaaccacatggtggctcacagccatttgtaatgggatttggtgtcctcttctgatgtgt 593

                                                                       
Query: 180 ctgaagacagctatagtatactcatatacgtaaataaatcttaaaaaaaataaaaacaaa 239
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 592 ctgaagacagctatagtatactcatatatgtaaataaatcttaaaaaaaataaaaacaaa 533

                                                                       
Query: 240 acaaacaacagtattttagctaatgtagttattttcttctttaaggtgatttcataatga 299
           ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||
Sbjct: 532 acaaacaacagtattttagctaatgtagttattttc----ttaaggtgatttcataatga 477

                                                                       
Query: 300 aaataatttaagataaatatgccacagggtgtctttttcagcaaccttagttgacagtta 359
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 476 aaataatttaagataaatatgccacagggtgtctttttcagtaaccttagttgacagtta 417

                                                                       
Query: 360 ctttcaagacttgaaaaacagcattccacaccttctaacctttagagtttctgcttataa 419
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctttcaagacttgaaatacagcattccacaccttctaacctttagagtttctgcttataa 357

                                                                       
Query: 420 tcttgctggaattctggtggacttcttttataagtgacttaacgcttctcaatgttcttt 479
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 356 tcttgctggaattctggtggacttcttttataagtgacttaacacttctcaatgttcttt 297

                                                                       
Query: 480 ccttatgtacttttagcagtttagctataatgatgtggagaggtttccttctgagcatgt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ccttatgtacttttagcagtttagctataatgatgtggagaggtttccttctgagcatgt 237

                                                                       
Query: 540 catcttgagattctaaatctaaatctctgtaggatcctttatgacagtaattcaattgtt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 236 catcttgagattctaaatctaaatctctgtaggatcctttatgacagtagttcaattgtt 177

                      
Query: 600 taattattccc 610
           |||||||||||
Sbjct: 176 taattattccc 166


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 610
Length of database: 1006
Length adjustment: 10
Effective length of query: 600
Effective length of database: 996
Effective search space:   597600
Effective search space used:   597600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)