CGGGGGNNGNNNNCCNNNNNCNNACCCCCNNNNNCCNAAANNNNNNNNNN
NNNCCANNNACCCNCCAAANNNNNNNNCCCCCCCCCCCNCCCNNNNNNNN
NNNNCCCCNNNNCCNNCAANNNANNAACNNNNNNNCCNCNNCCCCCNCCC
NCTCCCAAACCAAACCCCCCNCCTCCCANNNNNNNCNNNNNNNNNNNTTC
CTCAAAAAATGCGGCCGGCTAAGGAGCACAANATTTCACNGATCGGGGGG
GAATTCCACAATCTGTTTTCCGGAAAAAAGGAAGCTTTTGGGGAAATTAA
AAAAAATAAGGGGGGGGGATCAAAGTCCTAAGTGGGTGGGAACAATTTGG
CTAAAATTCCCCGGAGGGGGGNTTCCCCAGGGGAAGGGGGCCAAAAAAGC
GAAATCGGGGGGTTGGGCCCAAAGAGGGGAAGCGGGGTGGNAAAAGAAGA
AGGGGAGGGGGGGGGGGTTACCCCCCCACCAAGAGAAGTTTTTATAGGGG
GGGGGGCGGGGTTCNTTACTAAAATAACAGGGGGGGGGGGTCACCTATAC
TTTAACCTTATTTCTCCCTTCCTCCCCCCCCCTTTTTAAGGGGGTGGGGG
AGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXATGTCTAGCTGCTGACACTGCTTCCTGCTCCTTCTGTTCCTCTGGCAG
ATATGTCTATACACACATACACACACACACACACACACACACACACACAC
ACACAAAATGATGAAAATCTTCTGTGTCCAACTTCTGTGCCACATGTTGG
GCCTTTTGAGAAGCAAAAGGGATCCAGCAATCCACTTGGAGGTTGAAAGC
TGAACAGTCATGTTGTCCCCTCCTTGAGAACTGAACGGTACTGAGGATCC
AGGTCTCGTCTGCTACACTAGGGAGGGAACACCCAACTCCAATATCCAAC
AGTCATAGCTACAGGAATCCCAACTGTGTTTGGCTATACCACTAATACAG
TGCTCAAAGAACACAGAGCCAGGCGTGGGGACAGCCTGTCACTGTACTTC
CTCTCCACTCTGCCTATGGTTGGTTTAAGGTAGCTGTGTTTTGAGGAATT
CTAGGAAGCTTTTAAAAGCATTTTTTTCCCCTTTTTGGTGTGTGGGGGAG
GAAACCTGGCTCTTTTCTGTGTCTTTGGATGACATCACATGTAGAGGTGG
TATTTTTGAATCAGGGAAGCCACACTTGAGACCCACAAGTAAAAGGCAAA
ACAAACAACCAAAAAATATCAATC

Query= MSMg01no045_o16.g1 MSMg01no045_o16.g1 CHROMAT_FILE:
MSMg01no045_o16.g1 PHD_FILE: MSMg01no045_o16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:59 2005
         (447 letters)



>mm_chr11_45735775_45736620
          Length = 846

 Score =  748 bits (387), Expect = 0.0
 Identities = 428/447 (95%), Gaps = 11/447 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgtctagctgctgacactgcttcctgctccttctgttcctctggcagatatgtctataca 60
           |||||||||||||||||||||||||||||| ||||| |||||||||| ||||||      
Sbjct: 211 tgtctagctgctgacactgcttcctgctccctctgtccctctggcaggtatgtc------ 264

                                                                       
Query: 61  cacatacacacacacacacacacacacacacacacacacacaaaatgatgaaaatcttct 120
             |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 265 --catacacacacacacacacacacacacacacacacacacaa--tgatgaaaatcttct 320

                                                                       
Query: 121 gtgtccaacttctgtgccacatgttgggccttttgagaagcaaaagggatccagcaatcc 180
           |||||||||||||||||||||||||||||||| ||||||||||||||||||||||  |||
Sbjct: 321 gtgtccaacttctgtgccacatgttgggccttctgagaagcaaaagggatccagccctcc 380

                                                                       
Query: 181 acttggaggttgaaagctgaacagtcatgttgtcccctccttgagaactgaacggtactg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttggaggttgaaagctgaacagtcatgttgtcccctccttgagaactgaacggtactg 440

                                                                       
Query: 241 aggatccaggtctcgtctgctacactagggagggaacacccaactccaatatccaacagt 300
           |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 aggagccaggtctcgtctgctaca-tagggagggaacacccaactccaatatccaacagt 499

                                                                       
Query: 301 catagctacaggaatcccaactgtgtttggctataccactaatacagtgctcaaagaaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 500 catagctacaggaatcccaactgtgtttggctataccactaatacagtgctcaaagagca 559

                                                                       
Query: 361 cagagccaggcgtggggacagcctgtcactgtacttcctctccactctgcctatggttgg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagagccaggcgtggggacagcctgtcactgtacttcctctccactctgcctatggttgg 619

                                      
Query: 421 tttaaggtagctgtgttttgaggaatt 447
           |||||||||||||||||||||||||||
Sbjct: 620 tttaaggtagctgtgttttgaggaatt 646


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 846
Length adjustment: 10
Effective length of query: 437
Effective length of database: 836
Effective search space:   365332
Effective search space used:   365332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)