Query= MSMg01no047_b09.b1 MSMg01no047_b09.b1 CHROMAT_FILE:
MSMg01no047_b09.b1 PHD_FILE: MSMg01no047_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:22 2005
(501 letters)
>mm_chr11_84614727_84615627
Length = 901
Score = 909 bits (470), Expect = 0.0
Identities = 473/474 (99%), Gaps = 1/474 (0%)
Strand = Plus / Minus
Query: 27 tccttcttccttcttcctcctcctctttctcctcctcctcctcttttctttttcctcttt 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 tccttcttccttcttcctcctcctctttctcctcctcctcctcttttctttttcctcttt 842
Query: 87 ctcctctttttgcc-tttttttttagatgggctctcacatagttcaaacctcccatgtag 145
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ctcctctttttgccttttttttttagatgggctctcacatagttcaaacctcccatgtag 782
Query: 146 ctgaggctagcctcaaattcctgatcctcccatttctgcctcccatgtgctgggatttca 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ctgaggctagcctcaaattcctgatcctcccatttctgcctcccatgtgctgggatttca 722
Query: 206 ggcatgtaccaccatgtctggcatggttggcaaattcaatgtctcacttgaggtttgttg 265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ggcatgtaccaccatgtctggcatggttggcaaattcaatgtctcacttgaggtttgttg 662
Query: 266 gaactgaaggagaggggatgcaaagccaagtcttaggggctcgctgagtccaaataggtc 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaactgaaggagaggggatgcaaagccaagtcttaggggctcgctgagtccaaataggtc 602
Query: 326 gtctgcccccttgtacagacgcagctcagcccacgtgttctctcttcttatctgtgcagg 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtctgcccccttgtacagacgcagctcagcccacgtgttctctcttcttatctgtgcagg 542
Query: 386 aagggacactcaatggctcccagctgacctgctatagaatccacacacagcttcttggtt 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagggacactcaatggctcccagctgacctgctatagaatccacacacagcttcttggtt 482
Query: 446 ccaacacctctctccctacctacttcaggacatggctggctggagtctggtccg 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaacacctctctccctacctacttcaggacatggctggctggagtctggtccg 428
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_b09.g1 MSMg01no047_b09.g1 CHROMAT_FILE:
MSMg01no047_b09.g1 PHD_FILE: MSMg01no047_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:22 2005
(458 letters)
>mm_chr11_84471782_84472639
Length = 858
Score = 862 bits (446), Expect = 0.0
Identities = 455/458 (99%)
Strand = Plus / Plus
Query: 1 atttcttttctctggggtggagcaaagggcatcgtgtctaggcagaagggacagggccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttcttttctctggggtggagcaaagggcatcgtgtctaggcagaagggacagggccat 260
Query: 61 ctcaaatccacatctatgtaggggtaagagctttttgctttgctgttcctcagggcctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaaatccacatctatgtaggggtaagagctttttgctttgctgttcctcagggcctgg 320
Query: 121 agggcaggtagggattcaggtcttgaaaaaaaagcatcttatatttgccactgggtggcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggcaggtagggattcaggtcttgaaaaaaaagcatcttatatttgccactgggtggcc 380
Query: 181 tgaatcttcaactctttggggtaccagccctccatccacagtctggacaagacctgacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaatcttcaactctttggggtaccagccctccatccacagtctggacaagacctgacat 440
Query: 241 cttacaggaaccccagtgcacaaagtctacaaagcacgtttcagggccctgtccacctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 441 cttacaggaaccccagtgcacaaagtctacaaagcacgtttcagggcccagcccacctcc 500
Query: 301 ctgacggggcattgtgaggggactggagctttttgcctctgtcctatccccttcctaagc 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgagggggcattgtgaggggactggagctttttgcctctgtcctatccccttcctaagc 560
Query: 361 cattgctggctctgtgcctcatccaggagcaaatgttaccctggggccagagggaactgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattgctggctctgtgcctcatccaggagcaaatgttaccctggggccagagggaactgg 620
Query: 421 tgagacataagaggagtttgtgttcctcaacaggaggc 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagacataagaggagtttgtgttcctcaacaggaggc 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
