Query= MSMg01no047_o21.b1 MSMg01no047_o21.b1 CHROMAT_FILE:
MSMg01no047_o21.b1 PHD_FILE: MSMg01no047_o21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:21 2005
(590 letters)
>mm_chr11_96657189_96658178
Length = 990
Score = 1133 bits (586), Expect = 0.0
Identities = 586/586 (100%)
Strand = Plus / Minus
Query: 5 gaattccggacctctggaaaccagctactgttcttaaccactaagccatttctctaaccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 gaattccggacctctggaaaccagctactgttcttaaccactaagccatttctctaaccc 814
Query: 65 tgaactctttaagagctctgtttattcagctgagagatgtactaattcattatacattgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 tgaactctttaagagctctgtttattcagctgagagatgtactaattcattatacattgt 754
Query: 125 ctttaactaaggggtaattatctgaaaaccagtgcattgttattgtccagtgactactga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ctttaactaaggggtaattatctgaaaaccagtgcattgttattgtccagtgactactga 694
Query: 185 ataataaaattaatatataggtcttataaaacagtatattcgagccaggcgtggtggcgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 ataataaaattaatatataggtcttataaaacagtatattcgagccaggcgtggtggcgc 634
Query: 245 acacctttagtcccagcacttgggaggcagaggatttctgagttgccaaagctcttaact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 acacctttagtcccagcacttgggaggcagaggatttctgagttgccaaagctcttaact 574
Query: 305 attgacacctctccagctgagatatgggttttgttttgttaattaggtatctctacatat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 attgacacctctccagctgagatatgggttttgttttgttaattaggtatctctacatat 514
Query: 365 atattcctttagagggttaggaaaggaatctccaggagttggatttaccagtggttgtga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atattcctttagagggttaggaaaggaatctccaggagttggatttaccagtggttgtga 454
Query: 425 gccaacctcaattgtgctgggaaccaatcccaagtaagagcaacaagacctcttaactgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gccaacctcaattgtgctgggaaccaatcccaagtaagagcaacaagacctcttaactgc 394
Query: 485 tgaaccatctctccaacccccagtattggttgttatgcaagatgtatttgttaagagttt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgaaccatctctccaacccccagtattggttgttatgcaagatgtatttgttaagagttt 334
Query: 545 aagcatagttgggcgtggtggtgcacgcctttaatcccagcatttg 590
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aagcatagttgggcgtggtggtgcacgcctttaatcccagcatttg 288
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no047_o21.g1 MSMg01no047_o21.g1 CHROMAT_FILE:
MSMg01no047_o21.g1 PHD_FILE: MSMg01no047_o21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:21 2005
(593 letters)
>mm_chr11_96595127_96596119
Length = 993
Score = 458 bits (237), Expect = e-133
Identities = 294/315 (93%), Gaps = 18/315 (5%)
Strand = Plus / Plus
Query: 289 gaaaggaaaggaaaggaaaggaaa-agaaaagaaaagaaaagaaaagaaaa-gaaaa-ga 345
|||| |||| |||| |||| |||| |||||||||||||||||||||||||| ||||| ||
Sbjct: 483 gaaa-gaaa-gaaa-gaaa-gaaagagaaaagaaaagaaaagaaaagaaaaggaaaagga 538
Query: 346 aaa-gaaaa-gaaaa-gaaaa-gaaaa-gaaaa-gaaaa-gaaaagaaaaggctgcgagg 398
||| ||||| ||||| ||||| ||||| ||||| ||||| |||||||||||||||| |||
Sbjct: 539 aaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaagaaaaggctgcaagg 598
Query: 399 agagagtctggaagaaggagactcaaggcagggaaataagatgagcatttagaaaggggg 458
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 599 agagagcctggaagaaggagactcaaggcagggaagtaagatgagcatttagaaaggggg 658
Query: 459 aagatgccagcttttaaccctggactgtccttgatggccctgctgggatcgggggatgtt 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aagatgccagcttttaaccctggactgtccttgatggccctgctgggatcgggggatgtt 718
Query: 519 tgcttgcttgcttgcttgcttgcttgttttatttaacatgtattggtattttgtctgtac 578
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 719 tgcttgcttgcttgcttgcttg----ttttatttaacatgtattggtattttgtctgtac 774
Query: 579 atatgtctgtgccct 593
|||||||||||||||
Sbjct: 775 atatgtctgtgccct 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 81
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
