Query= MSMg01no048_c10.b1 MSMg01no048_c10.b1 CHROMAT_FILE:
MSMg01no048_c10.b1 PHD_FILE: MSMg01no048_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:46 2005
(673 letters)
>mm_chr11_67448225_67449297
Length = 1073
Score = 1193 bits (617), Expect = 0.0
Identities = 659/673 (97%)
Strand = Plus / Minus
Query: 1 gcaggagacactagactgggtgctgaggccagcaccctgtttataaaccgccacagctct 60
||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||
Sbjct: 873 gcaggagacactagactgggttctgaggccagcaccctgtttataaacaggcacagctct 814
Query: 61 gcctcctttcagtcccagcatgccttgcaggtgcttcttcaactccacttcatcagagaa 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 813 gcctcctttcagtcccagcatgccttgcaggtgcctcttcaactccacttcatcagagaa 754
Query: 121 ttcagagtccccctgaggctttccggaagagtagttttaaagaatgaccacttgttccag 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 753 ttcagagtccccctgaggctttccggaagagtagttttaaagaatgaccgcttgttccag 694
Query: 181 aaacttctgtctggccagttggtccttactgtatgtcttggctgtctagtatgtagattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 aaacttctgtctggccagttggtccttactgtatgtcttggctgtctagtatgtagattg 634
Query: 241 tgttcccaaagatgaagttcatggtgcattttctcctatggctgtgattggatgaaagcc 300
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 633 tgttcccaaagatgaagttcatggtgcattttctcctatggctgtgatcgggtgaaagcc 574
Query: 301 taggacagcatggtgggaatcagactcttcaaacaccaggatcacaggttctaaaggctt 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 573 taggacagcatggtgggaatcagactcttcaaacaacaggatcacaggttctaaaggctt 514
Query: 361 tgcagccccatttcacaagggagcaccatactctcccccgctgacgacaactgggaggtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tgcagccccatttcacaagggagcaccatactctcccccgctgacgacaactgggaggtc 454
Query: 421 tcacttaggttgtggagcaggcttccagcctgactactttctagtccgtgatgtacgaga 480
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 453 tcatttaggttgtggagcaggcttccagccttactactttctagtccgtgatgtacgaga 394
Query: 481 gccctgctcccgaggggcagagggacctagagttccctgacctatggctgagcttgaggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gccctgctcccgaggggcagagggacctagagttccctgacctatggctgagcttgaggg 334
Query: 541 ctcgggttggaaccctgcaagggcctctgctcaggcgagacatagctgtctgctacatat 600
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 333 ctcgggttggaaccctgcaagggcctctgctcaggggagacatagctgtctgctacatat 274
Query: 601 tctccagatttacttcttctcaggctcctcccaaatcctggcaggtcccaggtaatcctg 660
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 273 tctccagatttacttcttctcaggctcctcccaaatcctggcaggtcctaggtaatcctg 214
Query: 661 cccatgtcccctg 673
|||||||||||
Sbjct: 213 ggcatgtcccctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no048_c10.g1 MSMg01no048_c10.g1 CHROMAT_FILE:
MSMg01no048_c10.g1 PHD_FILE: MSMg01no048_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:08:46 2005
(626 letters)
>mm_chr11_67343918_67344943
Length = 1026
Score = 1091 bits (564), Expect = 0.0
Identities = 610/626 (97%), Gaps = 3/626 (0%)
Strand = Plus / Plus
Query: 1 ggattcgggtgtggtggcatcatttctgtcctcttaagtctttctagccccggggctgga 60
||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 201 ggatttgggtgtggtggcatcatttctgtcctcttaagtctttctagtcatggggctgga 260
Query: 61 ggtagagctagagcctggaatgctagagagatgccttaagccggcacagcccagaagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtagagctagagcctggaatgctagagagatgccttaagccggcacagcccagaagagc 320
Query: 121 ttcctgtggcaacagaaaccttctgtttgtgtcactaccatgtgcttggtcacactgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcctgtggcaacagaaaccttctgtttgtgtcactaccatgtgcttggtcacactgggg 380
Query: 181 acatggtaaaagggactgaggaaaggggtctttacatttatttaatttggattaacttag 240
|||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 acatggtaaaagggaccgtggaaaggggtcttcacatttatttaatttggattaacttag 440
Query: 241 atttaaatagcagtagccatatcagatatagcccagctccaaggcatacacgtttaagga 300
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 gtttaaatagcagtagccatatcagatatagcccagctctaaggcatacacgtttaagga 500
Query: 301 caagaataggacagtaaaagccttttagtggggccaagtatggtggaatacacatgtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagaataggacagtaaaagccttttagtggggccaagtatggtggaatacacatgtctt 560
Query: 361 taacccaacacgtaagagttggaggctagtgcatctctgtttactcagggccagcctaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taacccaacacgtaagagttggaggctagtgcatctctgtttactcagggccagcctaac 620
Query: 421 ttacatagggagttgcagtacagctagggttacatagtgagatcttgtcctccaaaaaag 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 ttacatagggagttgcagtacagctagggttacatagtgagatcttgttctccaaaaaag 680
Query: 481 gaaaataaaaataataaataaattaattaattattaattaattaacaaggggtctcatgt 540
||||||||||||||||||||||| ||| || ||||||||||||| ||||||||||||||
Sbjct: 681 gaaaataaaaataataaataaataaat-aa--attaattaattaaaaaggggtctcatgt 737
Query: 541 agcctaggctggcctcaaactctcatgtagctgaagacaatctgaacttctgcctctaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 agcctaggctggcctcaaactctcatgtagctgaagacaatctgaacttctgcctctaca 797
Query: 601 catatgtattggcacgtgtgccctcc 626
|||||| |||||||||||||||||||
Sbjct: 798 catatgcattggcacgtgtgccctcc 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
