Query= MSMg01no053_a24.b1 MSMg01no053_a24.b1 CHROMAT_FILE:
MSMg01no053_a24.b1 PHD_FILE: MSMg01no053_a24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:52 2005
(333 letters)
>mm_chr4_122524144_122524876
Length = 733
Score = 598 bits (309), Expect = e-175
Identities = 324/329 (98%), Gaps = 1/329 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaggccagcctgccctacagagtgagttccaggacagtcagggagggctaccca 64
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gaattcaaggccagcctggtctacagagtgagttccaggacagtcagggagggctaccca 560
Query: 65 gagaaactgtgtctcgcacaaactaaagtaaatgcataaaataaaaagaatattaaagcc 124
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gagaaactgtgtctcg-aaaaactaaagtaaatgcataaaataaaaagaatattaaagcc 501
Query: 125 tgcatccaagctttaatttctgttgtcaatcatgttgacaataacatacagcatgagagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgcatccaagctttaatttctgttgtcaatcatgttgacaataacatacagcatgagagg 441
Query: 185 agttctaatccagtgacgcgcctttcccctcaaatggacatttctaagtggtaccacaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agttctaatccagtgacgcgcctttcccctcaaatggacatttctaagtggtaccacaaa 381
Query: 245 ttagaacaaaaagcctccaccctagttaatgttagttgtacagcacaactgtcagagaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttagaacaaaaagcctccaccctagttaatgttagttgtacagcacaactgtcagagaac 321
Query: 305 aggaacactgttatatttcccttttcccg 333
|||||||||||||| ||||||||||||||
Sbjct: 320 aggaacactgttatgtttcccttttcccg 292
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no053_a24.g1 MSMg01no053_a24.g1 CHROMAT_FILE:
MSMg01no053_a24.g1 PHD_FILE: MSMg01no053_a24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:52 2005
(414 letters)
>mm_chr11_3056482_3057295
Length = 814
Score = 777 bits (402), Expect = 0.0
Identities = 411/414 (99%)
Strand = Plus / Plus
Query: 1 tagaccagcacagactatacagtgagcttgaggccacccggagctacccatacagcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaccagcacagactatacagtgagcttgaggccacccggagctacccatacagcagag 260
Query: 61 ccctgtctggggttggggccaggagagtcttactgtagtgtcacgcagctgctgagcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccctgtctggggttggggccaggagagtcttactgtagtgtcacgcagctgctgagcaag 320
Query: 121 cttctttcttgtttgctgtagtcgggcctgggtcacgttgtctttgaaggctctaaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttctttcttgtttgctgtagtcgggcctgggtcacgttgtctttgaaggctctaaagca 380
Query: 181 agaatactacccagagacatgacaagaggggttataaaggtgcattaggagctgtggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaatactacccagagacatgacaagaggggttataaaggtgcattaggagctgtggaag 440
Query: 241 tgtgaacaaggattgtatcactggaagccactgtggttcgggactgctccagttctctgc 300
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgaacaaggaaagcatcactggaagccactgtggttcgggactgctccagttctctgc 500
Query: 301 agttttgctaccaagttcctaatagaaactagcttacccagcaggctcagtaacactgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agttttgctaccaagttcctaatagaaactagcttacccagcaggctcagtaacactgcc 560
Query: 361 ttcacacaaaaaacacagcgttgcctctaactgggggacttcccttgacccata 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcacacaaaaaacacagcgttgcctctaactgggggacttcccttgacccata 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
