Query= MSMg01no057_d22.b1 MSMg01no057_d22.b1 CHROMAT_FILE:
MSMg01no057_d22.b1 PHD_FILE: MSMg01no057_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:07 2005
(505 letters)
>mm_chr11_121685726_121686632
Length = 907
Score = 864 bits (447), Expect = 0.0
Identities = 492/509 (96%), Gaps = 6/509 (1%)
Strand = Plus / Minus
Query: 1 attttactttatctcagaactacaatatctctagaggttacaattatagacaaaattgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 attttactttatctcagaactacaatatctctagaggttacaattatagacaaaattgtt 648
Query: 61 tggaataggatagaaacatgtgatccaaagattaggagtaaattgtgaaacaatactcaa 120
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tggaataagacagaaacatgtgatccaaagattaggagtaaattgtgaaacaatactcaa 588
Query: 121 gtacctcacaatgatatttcagccaaaaatggagtacagatttgatggtactccaaatgt 180
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 587 gtacctcacagtgatatttcagccaaaaatggagtacagatttgatggtgctccaaatgt 528
Query: 181 tatgatagagctgaaaatgtcactttatccactgcattggggctgttatgtaaagcacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tatgatagagctgaaaatgtcactttatccactgcattggggctgttatgtaaagcacat 468
Query: 241 tacctgggcgatgctggt--aaaacctactttgcttctgattgaaagtacagtgaggagc 298
||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tacttgggtgatgctggtgtaaaacctactttgcttctgattgaaagtacagtgaggagc 408
Query: 299 attccacaattttacataatatagatcacctaaaaatacatttctttgaacacctcccat 358
||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct: 407 attccacgattttacataataaagatcacgtaaaaatacatttctttgaacacatcccat 348
Query: 359 cattggactgcagatcacaaaagattaaagtattagactgctgatcaggattgaggcatt 418
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 347 cattggactgcagatcacaaaagattaaagtattagactgctgatcaggactgaggcatt 288
Query: 419 accagat--ttttttttcccacatttgtcacagttcaagggttctcacccatttgagttc 476
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 accagatgtttttttttc--acatttgtcacagttcaagggttctcacccatttgagttc 230
Query: 477 tctgatgctgaaaacggagagtgctctgg 505
|||||||||||||||||||||||||||||
Sbjct: 229 tctgatgctgaaaacggagagtgctctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 907
Length adjustment: 10
Effective length of query: 495
Effective length of database: 897
Effective search space: 444015
Effective search space used: 444015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no057_d22.g1 MSMg01no057_d22.g1 CHROMAT_FILE:
MSMg01no057_d22.g1 PHD_FILE: MSMg01no057_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:59:08 2005
(321 letters)
>mm_chr11_121577042_121577762
Length = 721
Score = 605 bits (313), Expect = e-178
Identities = 319/321 (99%)
Strand = Plus / Plus
Query: 1 ctcttcactggacatgtgcactttggggaggcacaacttggatgtgccccacgctttagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcttcactggacatgtgcactttggggaggcacaacttggatgtgccccacgctttagt 260
Query: 61 gactttcaaaggatgtacaggaaagcagaagaaacgggcataaacccctgtgaaatcaat 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 gactttcaaaggatgtacaggaaagcagaagaaatgggcataaacccctgtgaaatcaat 320
Query: 121 atggagtgacttgcagggtgacacagtactgttgtccttcagatgagccatgttttgtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggagtgacttgcagggtgacacagtactgttgtccttcagatgagccatgttttgtgg 380
Query: 181 gctcagtcgctctatcatatcctgatagagattgcagactggtggcatgggcccagcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcagtcgctctatcatatcctgatagagattgcagactggtggcatgggcccagcctg 440
Query: 241 gtgctagaactgggaaggtacatgctgctctgaccccttacgtcccagccaaggatgccc 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 gtgctagaactgggaaggtacatgctgctctgaccccttaggtcccagccaaggatgccc 500
Query: 301 tgacccattggaactgctgta 321
|||||||||||||||||||||
Sbjct: 501 tgacccattggaactgctgta 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
