Query= MSMg01no058_f06.b1 MSMg01no058_f06.b1 CHROMAT_FILE:
MSMg01no058_f06.b1 PHD_FILE: MSMg01no058_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:33 2005
(295 letters)
>mm_chr11_75356284_75356979
Length = 696
Score = 549 bits (284), Expect = e-161
Identities = 293/296 (98%), Gaps = 1/296 (0%)
Strand = Plus / Plus
Query: 1 aatactgaaaa-atctgcattaaggggtctgggtgaaccagccacatcttgtcagttgcc 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatactgaaaacatctgcattaaggggtctgggtgaaccagccacatcttgtcagttgcc 260
Query: 60 agagccttaaggcactcactgtgagctttggctttcttggtggtaaaatcccaaaggcga 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagccttaaggcactcacagtgagctttggctttcttggtggtaaaatcccaaaggcga 320
Query: 120 gtctgtgtctccaatctttggggaagcctacctgttctctttctttatacacacagagaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctgtgtctccaatctttggggaagcctacctgttctctttctttatacacacagagaa 380
Query: 180 tgtcactaacggcacggtcgggggcagcgcagagccggaacccgaggagttgagcctggt 239
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcactaacagcacggtcgggggcagcgcagagccggaacccgaggagttgagcctggt 440
Query: 240 gaatggctggctcagctgtaaggcccaggatgagattctgaatttggccttcaccg 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatggctggctcagctgtaaggcccaggatgagattctgaatttggccttcaccg 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 696
Length adjustment: 9
Effective length of query: 286
Effective length of database: 687
Effective search space: 196482
Effective search space used: 196482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no058_f06.g1 MSMg01no058_f06.g1 CHROMAT_FILE:
MSMg01no058_f06.g1 PHD_FILE: MSMg01no058_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:33 2005
(245 letters)
>mm_chr11_75470089_75470734
Length = 646
Score = 437 bits (226), Expect = e-127
Identities = 241/246 (97%), Gaps = 3/246 (1%)
Strand = Plus / Minus
Query: 1 acagggaggggccatctctcc-actcccatccaccccaaattcccagaagtagaagttgt 59
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagggaggggccatctctccaactcccatccaccccaaattcccagaagtagaagttgt 386
Query: 60 ttagggatcaagccagagctctcgtcctaggagagggtttccccatgggccaccacctca 119
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttagggatcaagccagagctcacgtcctaggagagggtttccccatgggccaccacctca 326
Query: 120 gctggacttgatgcccaccccagaagcgggtggcctgccctccctcaactggagccactc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctggacttgatgcccaccccagaagcgggtggcctgccctccctcaactggagccactc 266
Query: 180 cctcctctccagctgctaggcttcccccccccgcccccc-tccccccgcagctcctccac 238
||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 265 cctcctctccagctgctaggcttcccccccc-gccccccctcctcccgcagctcctccac 207
Query: 239 cgttga 244
||||||
Sbjct: 206 cgttga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
