Query= MSMg01no059_b08.b1 MSMg01no059_b08.b1 CHROMAT_FILE:
MSMg01no059_b08.b1 PHD_FILE: MSMg01no059_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:30 2005
(227 letters)
>mm_chr11_121352582_121353209
Length = 628
Score = 410 bits (212), Expect = e-119
Identities = 221/224 (98%), Gaps = 1/224 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgaacccc-ccactgctcccttataaacctggagaggtctccgagaggtgcc 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gaattctctgaaccccatcactgctcccttataaacctggagaggtctccgagaggtgcc 341
Query: 64 accaagtgaagctttggtttgggcaggccataaggaccccatcagtgtgtcctcaggctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 accaagtgaagctttggtttgggcaggccataaggaccccatcagtgtgtcctcaggctc 281
Query: 124 tgcaccttcccactcattagacctacgccactgagctgccagggaagagaagcagctgag 183
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 280 tgcaccttcccactcattagacctaccccactgagctgccagggaagagaagcagctgag 221
Query: 184 cagaagggaggactctcacacactcacacacacacacacacaca 227
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cagaagggaggactctcacacactcacacacacacacacacaca 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 628
Length adjustment: 9
Effective length of query: 218
Effective length of database: 619
Effective search space: 134942
Effective search space used: 134942
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no059_b08.g1 MSMg01no059_b08.g1 CHROMAT_FILE:
MSMg01no059_b08.g1 PHD_FILE: MSMg01no059_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:30 2005
(242 letters)
>mm_chr11_121171554_121172195
Length = 642
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%)
Strand = Plus / Plus
Query: 1 tgccccacattgatctggagccatcatggcaaaactgacctggaggaagtgtgaattgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccccacattgatctggagccatcatggcaaaactgacctggaggaagtgtgaattgtc 260
Query: 61 tgagcaatgcacgcagggtgtggcctgagtagctcagaaaaggtgggagaactccactca 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 tgagcaatgcacgcagggtgtggcctgagtagctcagaaaagctgggagaactccactca 320
Query: 121 caaacatgggtgtagatacgtgcagtctgcacagcagtggtgttagctaaggtaaaactc 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaacatgggtgtagatatgtgcagtctgcacagcagtggtgttagctaaggtaaaactc 380
Query: 181 actgagcaaatggccacaggaagctcagcctgaggacagctgtcaactccagtatgaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgagcaaatggccacaggaagctcagcctgaggacagctgtcaactccagtatgaccc 440
Query: 241 ag 242
||
Sbjct: 441 ag 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
