Query= MSMg01no062_g19.b1 MSMg01no062_g19.b1 CHROMAT_FILE:
MSMg01no062_g19.b1 PHD_FILE: MSMg01no062_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:00 2005
(712 letters)
>mm_chr11_83300116_83301227
Length = 1112
Score = 371 bits (192), Expect = e-107
Identities = 192/192 (100%)
Strand = Plus / Minus
Query: 409 cttgtgtgtggtggctgtagttttccctttgtgaatggtaagactgttggttttgattat 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cttgtgtgtggtggctgtagttttccctttgtgaatggtaagactgttggttttgattat 741
Query: 469 aggaatcatgttgctgataattggactgctcatcatatgagccttgatgctgatcataac 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggaatcatgttgctgataattggactgctcatcatatgagccttgatgctgatcataac 681
Query: 529 ctgactgctggtcataagaatcttgctgaccatagtctgactggccatatgaaggtgctc 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctgactgctggtcataagaatcttgctgaccatagtctgactggccatatgaaggtgctc 621
Query: 589 ttccaccttgac 600
||||||||||||
Sbjct: 620 ttccaccttgac 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 712
Length of database: 1112
Length adjustment: 10
Effective length of query: 702
Effective length of database: 1102
Effective search space: 773604
Effective search space used: 773604
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no062_g19.g1 MSMg01no062_g19.g1 CHROMAT_FILE:
MSMg01no062_g19.g1 PHD_FILE: MSMg01no062_g19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:00 2005
(732 letters)
>mm_chr15_95753855_95754986
Length = 1132
Score = 808 bits (418), Expect = 0.0
Identities = 439/448 (97%), Gaps = 4/448 (0%)
Strand = Plus / Minus
Query: 285 cacccagaaagctcaccagaaagaaaacacgactccctgtcagaaacccagggtccagaa 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1132 cacccagaaagctcaccagaaagaaaacacgactccctgtcagaaacccagggtccagaa 1073
Query: 345 agagtgggacagtgtttgctaagtcataaaagcaagctgtgtacccagattctacacctg 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 agagtgggacagtgtttgctaagtcataaaagcaagctgtgtacccagattctacacctg 1013
Query: 405 tgaagccagtcatcaagaatgaaggaggaactcatgtaagttaaagacaaacaaacaaac 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 tgaagccagtcatcaagaatgaaggaggaactcatgtaagttaaagacaaacaaacaaac 953
Query: 465 aaacaaactaacaaacaaacaaaccactgggctctcaggccaggtaggatacaatattga 524
||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 952 aaaca----aacaaacaaaccaaccactgggctctcaggccaggtaggatacaacattga 897
Query: 525 ctccttccaaactctgcccagcccccaagagacaccaagttgagctcctaacacgcaaaa 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 896 ctccttccaaactctgcccagcccccaagagacaccaagttgagctcctaacacgcagaa 837
Query: 585 ttgtgagaaaaaaagctcattactcacaaactcccctgtctgttgtgatattatttgaaa 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ttgtgagaaaaaaagctcattactcacaaactcccctgtctgttgtgatattatttgaaa 777
Query: 645 cagaagaagacaggatctgacaaggggcttctatgctgagcacacagagaactattaatt 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 cagaagaagacaggatctgacaaggggcttctatgctgagcacacagagaactattaatt 717
Query: 705 ccaagtcaacagaattataggcagaaga 732
||||||||||| ||||| ||||||||||
Sbjct: 716 ccaagtcaacacaattacaggcagaaga 689
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 732
Length of database: 1132
Length adjustment: 10
Effective length of query: 722
Effective length of database: 1122
Effective search space: 810084
Effective search space used: 810084
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
|
