Query= MSMg01no063_e05.b1 MSMg01no063_e05.b1 CHROMAT_FILE:
MSMg01no063_e05.b1 PHD_FILE: MSMg01no063_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:33 2005
(592 letters)
>mm_chr11_79880848_79881839
Length = 992
Score = 754 bits (390), Expect = 0.0
Identities = 408/414 (98%)
Strand = Plus / Minus
Query: 5 gaattctttctattcacgaaattgactttacctaactagggcacttcctgcatatgctgt 64
|||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 414 gaattctttctaaagaggaaattgactttacctaaccagggcacttcctgcatatgctgt 355
Query: 65 atccgttaaagagccaggcagggccttgctggttcagtgctcaagtgcagagtttcctct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 atccgttaaagagccaggcagggccttgctggttcagtgctcaagtgcagagtttcctct 295
Query: 125 tagaggaaggtctgaaatgtggcacagtggactttattctacctatattgcatttataaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tagaggaaggtctgaaatgtggcacagtggactttattctacctatattgcatttataaa 235
Query: 185 tcaaccatggtcttaaaaaattcaggttctggggctgggcctgagatgtagctcagttgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcaaccatggtcttaaaaaattcaggttctggggctgggcctgagatgtagctcagttgg 175
Query: 245 gagagtatttgcccactatgcttgaagctggatatggggggacctacctgtagtttggag 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 174 gagagtatttgcccactatgcttgaagctggacatggggggacctacctgtagtttggag 115
Query: 305 gggtgaaagaagaaagatcagaagttcaggatcctcttgaactacaatgagattgaggct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gggtgaaagaagaaagatcagaagttcaggatcctcttgaactacaatgagattgaggct 55
Query: 365 tggtatccatgagatattgactttcaaaataacaaacaaatgcatcaggtctag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tggtatccatgagatattgactttcaaaataacaaacaaatgcatcaggtctag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_e05.g1 MSMg01no063_e05.g1 CHROMAT_FILE:
MSMg01no063_e05.g1 PHD_FILE: MSMg01no063_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:33 2005
(288 letters)
>mm_chr11_79771637_79772324
Length = 688
Score = 491 bits (254), Expect = e-143
Identities = 280/290 (96%), Gaps = 4/290 (1%)
Strand = Plus / Plus
Query: 1 atctaactctaactcccatcaaccatgttccaagacaaaatctgtatctatctaaagtgt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 201 atctaactctaactcccaccaaccatgttccaagacaaaatctgtatctatataatgtgt 260
Query: 61 ccagtgcaattctaaaataaaggtaagcccctttagatttttagacagctctggctgtct 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 ccagtgcaattctaaaataaaggtaagcccctttagatttttagacagatctggctgtct 320
Query: 121 tagaactcactctatagacctggccttctaagtgctagaatgtaaagtttgcatcaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 tagaactcactctatagacctggccttctaagtgctagaatgtaaagtttgtatcaccat 380
Query: 181 gcccagttcttttgatttttctatctttaataatgtattaaacacagtgctt--gatatc 238
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 381 gcccagttcttttgatttttctatctttaataatgtattaaacacagtgcttaggat--c 438
Query: 239 atcctcacagagtaacaaaaaggtgaggagataaacgctcttaacagctt 288
||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 439 atcctcacagagtaagaaaaaggtgaggagataaacgctcttaacagctt 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
