Query= MSMg01no067_a23.b1 MSMg01no067_a23.b1 CHROMAT_FILE:
MSMg01no067_a23.b1 PHD_FILE: MSMg01no067_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:03 2005
(637 letters)
>mm_chr11_57071055_57072091
Length = 1037
Score = 1162 bits (601), Expect = 0.0
Identities = 628/643 (97%), Gaps = 11/643 (1%)
Strand = Plus / Minus
Query: 5 gaattcagtcctgaatccctagtcgaatcaagtaactgagctatgcacttcagcatctat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 gaattcagtcctgaaaccctagtcgaatcaagtaactgagctatgcacttcagcatctat 884
Query: 65 gtgttcctatgtgagagaagtcccaggattttggtatgaacagctggagttttatatccg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 gtgttcctatgtgagagaagtcccaggattttggtatgaacagctggagttttatatccg 824
Query: 125 aggaaacaaaggctatgcagttaagtcactccagttgcagagcttactaaatggtagatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 aggaaacaaaggctatgcagttaagtcactccagttgcagagcttactaaatggtagatc 764
Query: 185 tgtgatcaaacacaagtgtgtctggatgggaacttctcaacctgagcaaggccatcttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tgtgatcaaacacaagtgtgtctggatgggaacttctcaacctgagcaaggccatcttta 704
Query: 245 catctttgccgacctgacccgtccagctccgtctgcccttcacttgcttgtctaagcctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 catctttgccgacctgacccgtccagctccgtctgcccttcacttgcttgtctaagcctc 644
Query: 305 tctgtaaccctgggacaagcacctgtctttccatttggtctccccaagcagattcttagt 364
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 643 tctgtaaccctgggacaagcacctgtctttcgatttggtctccccaagcagattcttagt 584
Query: 365 tctgccctctgggattactcagctgtccactccaccttattgtctgctatttctttgggt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 tctgccctctgggattactcagctgtccactccaccttattgtctgctatttctttgggt 524
Query: 425 gcctcggctcttctgctttgcaaactcagaggttggcatgcatgcttcctgcttcttcag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gcctcggctcttctgctttgcaaactcagaggttggcatgcatgcttcctgcttcttcag 464
Query: 485 acctaccacaatgcttatagcgtttgctgtcagtgcaggcttataaaatgccatatcccc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 acctaccacaatgcttatagcgtttgctgtcagtgcaggcttataaaatgccatatcccc 404
Query: 545 tactccttatagcaccatgcacaaaagcc----------aaaaaaaaaagtcactactga 594
||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 403 tactccttatagcaccatgcacaaaagccaaaaaaaaaaaaaaaaaaaagtcac-actga 345
Query: 595 agcgcgtgacaatggtggacaaagaaaatgtggtacagatgca 637
|||| || |||||||||||||||||||||||||||||||||||
Sbjct: 344 agcgtgtaacaatggtggacaaagaaaatgtggtacagatgca 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_a23.g1 MSMg01no067_a23.g1 CHROMAT_FILE:
MSMg01no067_a23.g1 PHD_FILE: MSMg01no067_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:04 2005
(292 letters)
>mm_chr11_56949577_56950270
Length = 694
Score = 505 bits (261), Expect = e-147
Identities = 286/295 (96%), Gaps = 4/295 (1%)
Strand = Plus / Plus
Query: 1 aggaggcagaagcagaggacccccaggcacgctagctgaattggctaattccggattctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aggaggcagaagcagaggacccccaggcacgctagctgaattggctaattctggattctg 260
Query: 61 tgagagaccctgtctcaaaaagcaaggttagggacctatttgagaagacccttgacattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagagaccctgtctcaaaaagcaaggttagggacctatttgagaagacccttgacattc 320
Query: 121 cctgcccacatgctcacccaagttcatgtgaactgaaaaaaaaa--tacatgagtgctca 178
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 cctgcccacatgctcacccaagttcatgtgaactgaaaaaaaaaaatacatgagtgctca 380
Query: 179 c-acatgcacaattacatgtgtattcggtgaacaacatcaaagttgagctgctttatgca 237
| ||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 ccacatgcacaattacacgtggatttggtgaacaacatcaaagttgagctgctttatgca 440
Query: 238 aaacaataggactctgggtaaacgccttttttttttttaatgaagtatggccttc 292
||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 441 aaacaataggactctgggtaaacgccttttttttttt-aatgaattatggccttc 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 694
Length adjustment: 9
Effective length of query: 283
Effective length of database: 685
Effective search space: 193855
Effective search space used: 193855
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
