Query= MSMg01no067_c15.b1 MSMg01no067_c15.b1 CHROMAT_FILE:
MSMg01no067_c15.b1 PHD_FILE: MSMg01no067_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:11 2005
(188 letters)
>mm_chr11_64264347_64264934
Length = 588
Score = 327 bits (169), Expect = 3e-94
Identities = 181/185 (97%)
Strand = Plus / Plus
Query: 4 ggaattcatcagtgatgtaagattcccaggactgtatcatgtacgtatctgacctttgat 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatcagtgaggtaagattcccaggactgtatcatgtacgtatctgacctttgat 263
Query: 64 acctccagaacagtcctggacttgaattgaccagtgaatcttcatgattgctttgtgagc 123
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 264 acctccagaacagtcctggacttgaattgaccagtgagtcttcatgattgctttgtgagc 323
Query: 124 actctggctacgaatcagcagagacaaatcgttctgaaatgaagaggggtgacaattgtg 183
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 324 actctggctactaatcagcagaaacaaatcgttctgaaatgaagaggggtgacaattgtg 383
Query: 184 ttgtt 188
|||||
Sbjct: 384 ttgtt 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_c15.g1 MSMg01no067_c15.g1 CHROMAT_FILE:
MSMg01no067_c15.g1 PHD_FILE: MSMg01no067_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:11 2005
(244 letters)
>mm_chr11_64392950_64393594
Length = 645
Score = 449 bits (232), Expect = e-131
Identities = 235/236 (99%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 1 tgaaatgttgttaaatgtcacgagtgtaacctaaacagagacctgtctccctgtggtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tgaaatgttgttaaatgtcacgagtgtaacctaaacagagacctgtctccctgtggtctc 347
Query: 61 aactagctacaccagttaatttagctgctgtagttctttgggaagag-aattaatttttc 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 346 aactagctacaccagttaatttagctgctgtagttctttgggaagagaaattaatttttc 287
Query: 120 ttgggcagaagatctgcagtgactcttaattgagcacttttacttttgcctgctgaggtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ttgggcagaagatctgcagtgactcttaattgagcacttttacttttgcctgctgaggtt 227
Query: 180 tctacaacccgaatttaagaccatctacacacacacacacacacacacacacacac 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tctacaacccgaatttaagaccatctacacacacacacacacacacacacacacac 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 6
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
