Query= MSMg01no073_h15.b1 MSMg01no073_h15.b1 CHROMAT_FILE:
MSMg01no073_h15.b1 PHD_FILE: MSMg01no073_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:33 2005
(549 letters)
>mm_chr11_52276920_52277868
Length = 949
Score = 990 bits (512), Expect = 0.0
Identities = 536/544 (98%)
Strand = Plus / Plus
Query: 6 aattctggggtggccgtaagatcagtatctgggtgtcaggggctgctggtgaggtcatga 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattctggggtggccgtaagatcagtatctgggtgtcaggggctgctggtgaggtcatgg 265
Query: 66 cctcaccatacggttctctattcagagcaagagatcaggaggtgctaggaaaggcaacca 125
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 266 cctcaccatacggttctctattcagagcaagaggtcaggaggtgctaggaaaggcagcca 325
Query: 126 ggaaggatgaaccactggccagggttgcaggaccaagccgaggtgcgaggcatcatggga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggaaggatgaaccactggccagggttgcaggaccaagccgaggtgcgaggcatcatggga 385
Query: 186 atgggagatgtggtgagggcagcctggctcaagccctcaactcagacctagactcactcc 245
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 386 atgggagatgtggtgagggcagcctggctcaagccctcaactcagacctagtctcattcc 445
Query: 246 tgatgtcacaactggcagaggtgtgacctcgactggagaccaggcttctgttctctcagc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgatgtcacaactggcagaggtgtgacctcgactggagaccaggcttctgttctctcagc 505
Query: 306 tgcatggtggagggagacacagtcatgtctcctggaactgtggtactggttacacgacat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgcatggtggagggagacacagtcatgtctcctggaactgtggtactggttacacgacat 565
Query: 366 gaggccttcgagcaggtagcagagggcctggctggcagggagagcttagtaaatgttaac 425
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 566 gaggccttcgagcaggtagcagagggcctggccggcagggagagcttagtaaatgttaac 625
Query: 426 caccatgcctagcaggatccttagcactgtgtccattagtgtgaacattgttaatttcca 485
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 626 caccatgcctagcaggatccttagcactgtgtccattagtgtgaacactgttaatttcca 685
Query: 486 gaactttctcagctgctccagatggcagaacggtcctcctgaggcctggccagctaggac 545
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 686 gaactttctcagctgctccagatggcagaaaggtcctcctgaggcctggccagctaggac 745
Query: 546 taag 549
||||
Sbjct: 746 taag 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_h15.g1 MSMg01no073_h15.g1 CHROMAT_FILE:
MSMg01no073_h15.g1 PHD_FILE: MSMg01no073_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:33 2005
(600 letters)
>mm_chr11_52349726_52350722
Length = 997
Score = 1058 bits (547), Expect = 0.0
Identities = 584/597 (97%), Gaps = 3/597 (0%)
Strand = Plus / Minus
Query: 4 agctgagtcaccagaaaggtgggtccctggtgggtgttcccttctggccgcttgctcact 63
||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 797 agctgagtcactagaaaggtgggt-cctggtgggtgttcccttctggccgcttgctcact 739
Query: 64 cgctgggtaccagagaccctggagagagttggggaagggaacaccaagaatcacaggagc 123
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 738 cgctgggtcccagagaccctggagagagttggggaagggaacaccaagaatcataggagc 679
Query: 124 aggtggggacagattattcgctgagtatcctgtgaatggcacagctaatcttagctgccc 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 678 gggtggggacagagtattcgctgagtatcctgtgaatggcacagctaatcttagctacc- 620
Query: 184 acactttacagatgtcacagcggagcacaaaacgggagaggaagaggaggacatggacaa 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 619 -cactttacagatgtcacagcggagcacaaaacgggagaggaagaggaggacatggataa 561
Query: 244 tgaggatgagaaggagaaagtgtgtgtgtgtaggaagtgctgcccagggcccaagcttcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgaggatgagaaggagaaagtgtgtgtgtgtaggaagtgctgcccagggcccaagcttcc 501
Query: 304 tagtagctgcttctcttgttaggccactatccctccagataccaggtgagcctctaccat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tagtagctgcttctcttgttaggccactatccctccagataccaggtgagcctctaccat 441
Query: 364 ccctggctcctccttgggacactaaacaggcactaagctggtccagcctccagggagcgc 423
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 440 ccctggctcctccttgggacactaaccgggcactaagctggtccagcctccagggagcgc 381
Query: 424 cctctccagccccaggatgcagctccttgagaggctagaaaacctcctatctaggatcca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctctccagccccaggatgcagctccttgagaggctagaaaacctcctatctaggatcca 321
Query: 484 aagccctccagccataaggccaagaagctttgccactctcaaggataccacagagcgctg 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 320 aagccctccagccataaggccaagaagctttgccactctcaaggataccacagagcactg 261
Query: 544 agttagtctcctcacaccctgcctgccttcttgttcctgaagaagatgcctcaggca 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agttagtctcctcacaccctgcctgccttcttgttcctgaagaagatgcctcaggca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 997
Length adjustment: 10
Effective length of query: 590
Effective length of database: 987
Effective search space: 582330
Effective search space used: 582330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
