Query= MSMg01no075_c10.b1 MSMg01no075_c10.b1 CHROMAT_FILE:
MSMg01no075_c10.b1 PHD_FILE: MSMg01no075_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:44 2005
(171 letters)
>mm_chr11_63483323_63483893
Length = 571
Score = 331 bits (171), Expect = 2e-95
Identities = 171/171 (100%)
Strand = Plus / Plus
Query: 1 aaagccatcttaaagggaaaatattgtaaaaatccaaatacatcagatatacctagactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagccatcttaaagggaaaatattgtaaaaatccaaatacatcagatatacctagactg 260
Query: 61 tggaattcccaggcttatcaatgcagcgctgtcttggctgcttcccctgctaacctcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaattcccaggcttatcaatgcagcgctgtcttggctgcttcccctgctaacctcaga 320
Query: 121 ctccacttcagttggtatccagcatcatccaatggtgtgtctcttgaagag 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctccacttcagttggtatccagcatcatccaatggtgtgtctcttgaagag 371
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 171
Length of database: 571
Length adjustment: 8
Effective length of query: 163
Effective length of database: 563
Effective search space: 91769
Effective search space used: 91769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no075_c10.g1 MSMg01no075_c10.g1 CHROMAT_FILE:
MSMg01no075_c10.g1 PHD_FILE: MSMg01no075_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:44 2005
(547 letters)
>mm_chr11_63564969_63565915
Length = 947
Score = 731 bits (378), Expect = 0.0
Identities = 411/426 (96%), Gaps = 7/426 (1%)
Strand = Plus / Minus
Query: 122 catgagttgacttagttattaaaaacattcactgctcttccagaggactcgggtttaatt 181
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 947 catgagttgacttagttattaaaaacattcactgctcttccagaggacttgggtttaatt 888
Query: 182 cccagcacccatatcagacagctcataactgactatacgtctggtttctgcatgcatgag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 cccagcacccatatcagacagctcataactgactatacgtctggtttctgcatgcatgag 828
Query: 242 gtgcctgtacactcataaggcctccttccacatacacataaataataataaaaatataga 301
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 gtgcctatacattcataaggcctccttccacatacacataaataataataaaaatataga 768
Query: 302 aggttatagatttgcacacatactctttagtagagaagttgtgaccgcccaactaagacc 361
|||||||||||||||||||| |||||||||||||||||| | |||||||||||
Sbjct: 767 aggttatagatttgcacaca-------tagtagagaagttgtgactggtcaactaagacc 715
Query: 362 tagaaatacattcatcacttttagtcaccacacaaatataactctcaacaatacaaccta 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 tagaaatacattcatcacttttagtcaccacacaaatataactctcaacaatacaaccta 655
Query: 422 tcagatacagtgttcgtggaaatagtgacaaaggcagtgtggaacaggccgctggaataa 481
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 654 tgagatacagtgttcgtggaaatagtgacaaaggcagtgtggaacaggccactggaataa 595
Query: 482 ctggaggctttgcatgataccagtgagaatgtagaagtggctccatcatcttacatagcc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ctggaggctttgcatgataccagtgagaatgtagaagtggctccatcatcttacatagcc 535
Query: 542 atcgtt 547
||||||
Sbjct: 534 atcgtt 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
